Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899780
Identifier: 159899780
GI number: 159899780
Start: 4124427
End: 4125119
Strand: Direct
Name: 159899780
Synonym: Haur_3262
Alternate gene names: NA
Gene position: 4124427-4125119 (Clockwise)
Preceding gene: 159899776
Following gene: 159899781
Centisome position: 64.99
GC content: 52.24
Gene sequence:
>693_bases ATGTATAAGGCAGGAGAATTGGTCAAAAAATCGATTATTCGGGTCGATACTGGTAATATTATCGGTTCAGTCGCCGATCT TTTGGTTGATCACGATGCGGGGCGAATCGTTGGGCTATTGACTAGCACGGGCGGCCTGTTTCGCGAAGCTACAATTGTTG AATGGGCACAAGTTTTGGTCTGGGTTGGCGATGTGATTTTGGTTAAAGCTGGCTGCGAAGTGCTACGGGCCAACGCCATC CCCCATGTTCATGCCCTGCTCGAAAAGAAAATACACCTCACGGGCACGCCCGCGATTGGTCGATCAGGCAATAAATTGGG CACGATTGGCGAATTATTGCTCGATGAAACTGGCCTGATCGTTGGCTATGTGATCACCCGTGGCGTGTTGAAGGGCGAAC GGCAATATGTGCTCAGCGGCGGCATCGCGGGCATTGGCAGTGATGCAGTGGTGGTGTATGATGAAGCCTTGCGCGATACG CTCGAAGGGCTTGAGCCAAGCATCCCCGACCCCAAATTGACCATGGTCATGCCCTTAACTGGCACGCGTTTGAGCGTTGA AGCCCCAGCAACACCCGCCAATCCAGCCGAATCCAAGCCTAGTCCAACTGATGTCCAACGTTTGTCCTCGAATGAAATTG ATGCTATTCTGCGCGGCGATCAACCTATACCTGGAGCAACGAGTGAACATTGA
Upstream 100 bases:
>100_bases CCGAGATGCTGGAACTAGACCCAAGCATACCGCAGGCTTTAGCGGCTCGTCAACTGCGCAGCGCGTCATTCCAACCAAAT TTAGCTATGGAGTTATGGCA
Downstream 100 bases:
>100_bases CGATCTATCAGCCACGATTGCCGAGCTTGATTCCGCTGCAATTCAGCAAGCGCAACAACGCCAAGATCAACTGACCAAGC CGCAGGGAGCGCTGGGCCTG
Product: PRC-barrel domain-containing protein
Products: NA
Alternate protein names: Prc-Barrel Domain Protein
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MYKAGELVKKSIIRVDTGNIIGSVADLLVDHDAGRIVGLLTSTGGLFREATIVEWAQVLVWVGDVILVKAGCEVLRANAI PHVHALLEKKIHLTGTPAIGRSGNKLGTIGELLLDETGLIVGYVITRGVLKGERQYVLSGGIAGIGSDAVVVYDEALRDT LEGLEPSIPDPKLTMVMPLTGTRLSVEAPATPANPAESKPSPTDVQRLSSNEIDAILRGDQPIPGATSEH
Sequences:
>Translated_230_residues MYKAGELVKKSIIRVDTGNIIGSVADLLVDHDAGRIVGLLTSTGGLFREATIVEWAQVLVWVGDVILVKAGCEVLRANAI PHVHALLEKKIHLTGTPAIGRSGNKLGTIGELLLDETGLIVGYVITRGVLKGERQYVLSGGIAGIGSDAVVVYDEALRDT LEGLEPSIPDPKLTMVMPLTGTRLSVEAPATPANPAESKPSPTDVQRLSSNEIDAILRGDQPIPGATSEH >Mature_230_residues MYKAGELVKKSIIRVDTGNIIGSVADLLVDHDAGRIVGLLTSTGGLFREATIVEWAQVLVWVGDVILVKAGCEVLRANAI PHVHALLEKKIHLTGTPAIGRSGNKLGTIGELLLDETGLIVGYVITRGVLKGERQYVLSGGIAGIGSDAVVVYDEALRDT LEGLEPSIPDPKLTMVMPLTGTRLSVEAPATPANPAESKPSPTDVQRLSSNEIDAILRGDQPIPGATSEH
Specific function: Unknown
COG id: COG3881
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24220; Mature: 24220
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKAGELVKKSIIRVDTGNIIGSVADLLVDHDAGRIVGLLTSTGGLFREATIVEWAQVLV CCCHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH WVGDVILVKAGCEVLRANAIPHVHALLEKKIHLTGTPAIGRSGNKLGTIGELLLDETGLI HHHHHHHHHHCHHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHCCCCHH VGYVITRGVLKGERQYVLSGGIAGIGSDAVVVYDEALRDTLEGLEPSIPDPKLTMVMPLT HHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECC GTRLSVEAPATPANPAESKPSPTDVQRLSSNEIDAILRGDQPIPGATSEH CCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MYKAGELVKKSIIRVDTGNIIGSVADLLVDHDAGRIVGLLTSTGGLFREATIVEWAQVLV CCCHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH WVGDVILVKAGCEVLRANAIPHVHALLEKKIHLTGTPAIGRSGNKLGTIGELLLDETGLI HHHHHHHHHHCHHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHCCCCHH VGYVITRGVLKGERQYVLSGGIAGIGSDAVVVYDEALRDTLEGLEPSIPDPKLTMVMPLT HHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECC GTRLSVEAPATPANPAESKPSPTDVQRLSSNEIDAILRGDQPIPGATSEH CCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA