Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899780

Identifier: 159899780

GI number: 159899780

Start: 4124427

End: 4125119

Strand: Direct

Name: 159899780

Synonym: Haur_3262

Alternate gene names: NA

Gene position: 4124427-4125119 (Clockwise)

Preceding gene: 159899776

Following gene: 159899781

Centisome position: 64.99

GC content: 52.24

Gene sequence:

>693_bases
ATGTATAAGGCAGGAGAATTGGTCAAAAAATCGATTATTCGGGTCGATACTGGTAATATTATCGGTTCAGTCGCCGATCT
TTTGGTTGATCACGATGCGGGGCGAATCGTTGGGCTATTGACTAGCACGGGCGGCCTGTTTCGCGAAGCTACAATTGTTG
AATGGGCACAAGTTTTGGTCTGGGTTGGCGATGTGATTTTGGTTAAAGCTGGCTGCGAAGTGCTACGGGCCAACGCCATC
CCCCATGTTCATGCCCTGCTCGAAAAGAAAATACACCTCACGGGCACGCCCGCGATTGGTCGATCAGGCAATAAATTGGG
CACGATTGGCGAATTATTGCTCGATGAAACTGGCCTGATCGTTGGCTATGTGATCACCCGTGGCGTGTTGAAGGGCGAAC
GGCAATATGTGCTCAGCGGCGGCATCGCGGGCATTGGCAGTGATGCAGTGGTGGTGTATGATGAAGCCTTGCGCGATACG
CTCGAAGGGCTTGAGCCAAGCATCCCCGACCCCAAATTGACCATGGTCATGCCCTTAACTGGCACGCGTTTGAGCGTTGA
AGCCCCAGCAACACCCGCCAATCCAGCCGAATCCAAGCCTAGTCCAACTGATGTCCAACGTTTGTCCTCGAATGAAATTG
ATGCTATTCTGCGCGGCGATCAACCTATACCTGGAGCAACGAGTGAACATTGA

Upstream 100 bases:

>100_bases
CCGAGATGCTGGAACTAGACCCAAGCATACCGCAGGCTTTAGCGGCTCGTCAACTGCGCAGCGCGTCATTCCAACCAAAT
TTAGCTATGGAGTTATGGCA

Downstream 100 bases:

>100_bases
CGATCTATCAGCCACGATTGCCGAGCTTGATTCCGCTGCAATTCAGCAAGCGCAACAACGCCAAGATCAACTGACCAAGC
CGCAGGGAGCGCTGGGCCTG

Product: PRC-barrel domain-containing protein

Products: NA

Alternate protein names: Prc-Barrel Domain Protein

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MYKAGELVKKSIIRVDTGNIIGSVADLLVDHDAGRIVGLLTSTGGLFREATIVEWAQVLVWVGDVILVKAGCEVLRANAI
PHVHALLEKKIHLTGTPAIGRSGNKLGTIGELLLDETGLIVGYVITRGVLKGERQYVLSGGIAGIGSDAVVVYDEALRDT
LEGLEPSIPDPKLTMVMPLTGTRLSVEAPATPANPAESKPSPTDVQRLSSNEIDAILRGDQPIPGATSEH

Sequences:

>Translated_230_residues
MYKAGELVKKSIIRVDTGNIIGSVADLLVDHDAGRIVGLLTSTGGLFREATIVEWAQVLVWVGDVILVKAGCEVLRANAI
PHVHALLEKKIHLTGTPAIGRSGNKLGTIGELLLDETGLIVGYVITRGVLKGERQYVLSGGIAGIGSDAVVVYDEALRDT
LEGLEPSIPDPKLTMVMPLTGTRLSVEAPATPANPAESKPSPTDVQRLSSNEIDAILRGDQPIPGATSEH
>Mature_230_residues
MYKAGELVKKSIIRVDTGNIIGSVADLLVDHDAGRIVGLLTSTGGLFREATIVEWAQVLVWVGDVILVKAGCEVLRANAI
PHVHALLEKKIHLTGTPAIGRSGNKLGTIGELLLDETGLIVGYVITRGVLKGERQYVLSGGIAGIGSDAVVVYDEALRDT
LEGLEPSIPDPKLTMVMPLTGTRLSVEAPATPANPAESKPSPTDVQRLSSNEIDAILRGDQPIPGATSEH

Specific function: Unknown

COG id: COG3881

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24220; Mature: 24220

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKAGELVKKSIIRVDTGNIIGSVADLLVDHDAGRIVGLLTSTGGLFREATIVEWAQVLV
CCCHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
WVGDVILVKAGCEVLRANAIPHVHALLEKKIHLTGTPAIGRSGNKLGTIGELLLDETGLI
HHHHHHHHHHCHHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHCCCCHH
VGYVITRGVLKGERQYVLSGGIAGIGSDAVVVYDEALRDTLEGLEPSIPDPKLTMVMPLT
HHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECC
GTRLSVEAPATPANPAESKPSPTDVQRLSSNEIDAILRGDQPIPGATSEH
CCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MYKAGELVKKSIIRVDTGNIIGSVADLLVDHDAGRIVGLLTSTGGLFREATIVEWAQVLV
CCCHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
WVGDVILVKAGCEVLRANAIPHVHALLEKKIHLTGTPAIGRSGNKLGTIGELLLDETGLI
HHHHHHHHHHCHHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHCCCCHH
VGYVITRGVLKGERQYVLSGGIAGIGSDAVVVYDEALRDTLEGLEPSIPDPKLTMVMPLT
HHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECC
GTRLSVEAPATPANPAESKPSPTDVQRLSSNEIDAILRGDQPIPGATSEH
CCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA