Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899776
Identifier: 159899776
GI number: 159899776
Start: 4120336
End: 4120548
Strand: Direct
Name: 159899776
Synonym: Haur_3258
Alternate gene names: NA
Gene position: 4120336-4120548 (Clockwise)
Preceding gene: 159899766
Following gene: 159899780
Centisome position: 64.92
GC content: 46.95
Gene sequence:
>213_bases ATGAGCGATACCGATCAAGAATGGGTTGAACGTTTAGAGGCAATCCAAGCGCAATTGGGCGATTTATATACCAATATTGA GGAATTACGCGGGATTGTACGCGAGGCTGGGCGCAAAACCGATGCCCAAGCTTTCAACGAGCCACTTGAGCGTTTAGCCC GTTATGGTCGCTTATTTAGTGATATTCATAGCAGTTGGACAGCCGTCGAATAA
Upstream 100 bases:
>100_bases ATCGTCCTGTAGCCAACCGAATAATTCTTGGTTATCCATGCCCTCTATAAAGACACATGTGCTAAAATAGGGGTACTACA TTGGTTACAAGGAGTCAAGT
Downstream 100 bases:
>100_bases GCTAAAATGCCCCGCCGTTGGCAATTCCAGCGGCGGGGCAACCGTTAAGCTTTAAGGCTGAATTTCAATTCGATAGTTGA CAGCACTATCGCCATTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MSDTDQEWVERLEAIQAQLGDLYTNIEELRGIVREAGRKTDAQAFNEPLERLARYGRLFSDIHSSWTAVE
Sequences:
>Translated_70_residues MSDTDQEWVERLEAIQAQLGDLYTNIEELRGIVREAGRKTDAQAFNEPLERLARYGRLFSDIHSSWTAVE >Mature_69_residues SDTDQEWVERLEAIQAQLGDLYTNIEELRGIVREAGRKTDAQAFNEPLERLARYGRLFSDIHSSWTAVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8097; Mature: 7966
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTDQEWVERLEAIQAQLGDLYTNIEELRGIVREAGRKTDAQAFNEPLERLARYGRLFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DIHSSWTAVE HHHHHHHCCC >Mature Secondary Structure SDTDQEWVERLEAIQAQLGDLYTNIEELRGIVREAGRKTDAQAFNEPLERLARYGRLFS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DIHSSWTAVE HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA