Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899754

Identifier: 159899754

GI number: 159899754

Start: 4096464

End: 4099337

Strand: Direct

Name: 159899754

Synonym: Haur_3236

Alternate gene names: NA

Gene position: 4096464-4099337 (Clockwise)

Preceding gene: 159899753

Following gene: 159899755

Centisome position: 64.55

GC content: 51.39

Gene sequence:

>2874_bases
ATGCACGATGTTGAGCGAATCCGTCAGAAAATTATTAATTTACAAGCCCGCCGTGCCCAAGAAAGCGACCAAGATTTGAT
CGAGGCGCTTGATCAGATGATTGGGCAACATCAACACCAACTAAGTTTGTTGGCTCAACAAGCTGCCGCTGTGCTCGAAC
CACCAGCCCCCGCCGCTACCCAAGGCCAAGTTTATGGTTCCAGTGTGATGACCAACCTTGGTCATGTTTGGATCAACCAA
GTTTTTAATGCGCCCTTGAGCACTGGCGAACGCACCGATCAATTGATTTTGCACTATCTAGCTCATGTTCAGGGCAATGC
TGATCGCTTAGTGCTGGGCACTGATGTCCAAGATAGCGATCAAGAGCGTATGTCGTTGCAGCGGGTGTTTACCATGCTGC
AAGCCGATTTTTATGGGCCGATTGCAGGCGATGCCTTGTTGCAATCGCTGCTGCTGGGTAGCTCACAGCCACGCCCGCAA
TTGCAAGATTCGATTCTCAAGGCGCTCAACCAAATTCAACATCAGCGTTCGGTGATTTTGGGCGTGCCTGGTGGCGGCAA
AACGACGGTGGTGTCGTATCTGGCTTCGGCTCAAGCGGCGGCATTGCTCGACCCAAGCAAAGCTGAATTTTTGCATAGCC
AAGGCTGGATGCACACCAAACTTGTGCCAGTGCGGGTGCGACTGAAACATGTGCAACCACCAGCCGACCCTGAGCAACAA
ACTGCCGACGCTTTTTGGGAAGTCGTGACCGAATTGCAATTGGCTGGACGGTTTGGCCAACGTGCCATCAATAGCGATGT
TGGCTTTCAGCGGATCGAAGTTGAGCGCCAACAACGGCTGCAAGATGCAATTGAAGAATTATTGACCAATGGCAATGGCT
TGTTGCTGCTCGATGGACTTGATGAAGTGCAGCCCGAACATCTGGCTGCCGTCAAACGCTGTATCGAGCATGCTCAACGC
ATGTTTCACAAAAGCCGAATTATTGTCACATGTCGGGTGTTTGATTATGAGCATCCGCTGCCACCGCCGTTTCCCTCGCG
CCAGCTCTACGATTGGCCGACAATTCAATTGATGCCGTTTGACCTAACCGCGCAGCATGTGTATATCACCAATTACTATA
GCGAATTGGGACGCTTGCATGCCTCACACGCTGATATTGTCAGCATTCGTAAAAAGCATGCCAAACTGCATGCCGAGTTG
ACGAAATCGGGGATGTTGCATGAACTGACACGCACGCCGTTACTCTTGGCGCTGACCGTGCACGTGAATATGGTGCACAC
TGATTTGCCTGAAAGCGAAGGCAAATTGCTACACATTTGTATCGACGAATTGCTTAAACGCCGTGCGCCTGAGGCCATCG
CCGTTTCACTTGAAGATTTGTATGACTTGGTTGCATTGTTAGGCTATTATGCCCATAGTCAAGAAGAAATTCAAGGCAAA
GCGTTGCTTAGTTTGCAGCAAATCAATATGGTGGTGCAGCGCTATTATAGCGATCGCTATCCGCATCCCAATCAAATTCA
TATGCTTGCGCAGGCGGTTGGCAACGCAACCTTGCGCTTGATCAATAGCAATGGCTTATTGCAAGAGGCTAGCAATAATC
AGCAAGATAATCCACATTATGATTTTGCCCATCGCTTGTTTCAGCAATTTTTGGCAGGCATGTATTTGCTCAATCAAGAG
CGCCACGACGAATGTATTGAACGGGCCGGCAGCGAGCATTGGCGGGTTTGCTTGCACTACATGGCCAATTTTGCCCCTTA
CATTCAAAAGCAAAGCTTCATTTTTGGGGTGATTCAAGATTTATTGGGTGGTATGCCCGATGAACAGGTGCAAGGCTCGC
ACCTGCTTTTGGCGATTGGCAAAGCCAAAGTTGCTAGCGCTGGGCGGCGCAATTTATGGCAGCAAGCAGTCAATCATCTC
AAAAATATTGGCGGCTTGAGTGGCAGTAGCCGAGGCGTGCGCCGTTGGGCACCACCACGCATCGCCTTCCCCACTCGTTT
GCGGGCGGCCTTAGTGCTGGGCGCAATTGGCGATACCCGCTTTATTGGCGAAGATGGCGCACTCATTGCGCTGACTGAGC
GGGTTGTTTGCATTCATGCTGGCAGCGTTGAGCTGGAAGATCCTCATTCACGCCCCCAAACCTATAGCGTTGAGCGCTTT
TGGATGAGCCGCTATCTTCTGACCAACTTTGAGTATAGCCAATTTATTGCTGCCCGTGGGTATTTGGATGATCAGTGGTG
GCAGAACGACGATGCGCGGCATTGGCGACGCGGTGATCCATCGTGGCTACATGGTTTGCCACCGTGGGCGGCTCCGCGCC
GCTTGCCCGATTTATGGCATAACGAGCGTTTCAATCACCCAACTCAGCCAATTGTTGGAGTGAATTGGTACGAAGCGAAT
GCCTTTTGTGCTTGGCTCACGGTGCAACTGCGGCCTCAACTTGATGCGCTTGGGCCAAATTTGGTGGTACGTTTGCCGAG
TGAGGCTGAATGGCAACTCGCCGCCAGCCAACATAGTGAGCGCGAATACCCGTGGGGCGATGAATGGCGCAACGATCATG
CCAACACCAGTGAAAGCGAGCTTGAGCAACCAACTCCGGTTGGTATGTTTCCCTATGGCACCTGGAGCGATGGCCCAATG
GATTTAGCCGGCAATGTTTGCGAATGGACTAATAGCATCAATCGCGACCCTGAACTTGAACCACAAACCACGCGTAATCG
CCGTTTGCAACATCGCGATTTGATGGTCGCTGTGCGTGGTGGTTCGTGGTTTCATAATCGCTATTTTGCGCGTTGTCGTT
CGCGCTTACAGCATCGCCCATTTAGCCATGGCCCAAATATTGGTGTGCGCTTGATTATCGGCCACGCCGAATAA

Upstream 100 bases:

>100_bases
CCCTTTATGGACAAATGGCGGGGGATATACATCCCCCGTTTGAGGTATTTTATGCCATACTACAATGTATGGTATTTTTT
TGTAATCCATGAGGCGGCCT

Downstream 100 bases:

>100_bases
AGGAACTGAGATTTATGCAACTTTCAATGTTAGAGCAAATGAGCACCCAAAATTTGTATGATTTACGTGAGCAGCATCGC
AAAAATTTGAGCATGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 957; Mature: 957

Protein sequence:

>957_residues
MHDVERIRQKIINLQARRAQESDQDLIEALDQMIGQHQHQLSLLAQQAAAVLEPPAPAATQGQVYGSSVMTNLGHVWINQ
VFNAPLSTGERTDQLILHYLAHVQGNADRLVLGTDVQDSDQERMSLQRVFTMLQADFYGPIAGDALLQSLLLGSSQPRPQ
LQDSILKALNQIQHQRSVILGVPGGGKTTVVSYLASAQAAALLDPSKAEFLHSQGWMHTKLVPVRVRLKHVQPPADPEQQ
TADAFWEVVTELQLAGRFGQRAINSDVGFQRIEVERQQRLQDAIEELLTNGNGLLLLDGLDEVQPEHLAAVKRCIEHAQR
MFHKSRIIVTCRVFDYEHPLPPPFPSRQLYDWPTIQLMPFDLTAQHVYITNYYSELGRLHASHADIVSIRKKHAKLHAEL
TKSGMLHELTRTPLLLALTVHVNMVHTDLPESEGKLLHICIDELLKRRAPEAIAVSLEDLYDLVALLGYYAHSQEEIQGK
ALLSLQQINMVVQRYYSDRYPHPNQIHMLAQAVGNATLRLINSNGLLQEASNNQQDNPHYDFAHRLFQQFLAGMYLLNQE
RHDECIERAGSEHWRVCLHYMANFAPYIQKQSFIFGVIQDLLGGMPDEQVQGSHLLLAIGKAKVASAGRRNLWQQAVNHL
KNIGGLSGSSRGVRRWAPPRIAFPTRLRAALVLGAIGDTRFIGEDGALIALTERVVCIHAGSVELEDPHSRPQTYSVERF
WMSRYLLTNFEYSQFIAARGYLDDQWWQNDDARHWRRGDPSWLHGLPPWAAPRRLPDLWHNERFNHPTQPIVGVNWYEAN
AFCAWLTVQLRPQLDALGPNLVVRLPSEAEWQLAASQHSEREYPWGDEWRNDHANTSESELEQPTPVGMFPYGTWSDGPM
DLAGNVCEWTNSINRDPELEPQTTRNRRLQHRDLMVAVRGGSWFHNRYFARCRSRLQHRPFSHGPNIGVRLIIGHAE

Sequences:

>Translated_957_residues
MHDVERIRQKIINLQARRAQESDQDLIEALDQMIGQHQHQLSLLAQQAAAVLEPPAPAATQGQVYGSSVMTNLGHVWINQ
VFNAPLSTGERTDQLILHYLAHVQGNADRLVLGTDVQDSDQERMSLQRVFTMLQADFYGPIAGDALLQSLLLGSSQPRPQ
LQDSILKALNQIQHQRSVILGVPGGGKTTVVSYLASAQAAALLDPSKAEFLHSQGWMHTKLVPVRVRLKHVQPPADPEQQ
TADAFWEVVTELQLAGRFGQRAINSDVGFQRIEVERQQRLQDAIEELLTNGNGLLLLDGLDEVQPEHLAAVKRCIEHAQR
MFHKSRIIVTCRVFDYEHPLPPPFPSRQLYDWPTIQLMPFDLTAQHVYITNYYSELGRLHASHADIVSIRKKHAKLHAEL
TKSGMLHELTRTPLLLALTVHVNMVHTDLPESEGKLLHICIDELLKRRAPEAIAVSLEDLYDLVALLGYYAHSQEEIQGK
ALLSLQQINMVVQRYYSDRYPHPNQIHMLAQAVGNATLRLINSNGLLQEASNNQQDNPHYDFAHRLFQQFLAGMYLLNQE
RHDECIERAGSEHWRVCLHYMANFAPYIQKQSFIFGVIQDLLGGMPDEQVQGSHLLLAIGKAKVASAGRRNLWQQAVNHL
KNIGGLSGSSRGVRRWAPPRIAFPTRLRAALVLGAIGDTRFIGEDGALIALTERVVCIHAGSVELEDPHSRPQTYSVERF
WMSRYLLTNFEYSQFIAARGYLDDQWWQNDDARHWRRGDPSWLHGLPPWAAPRRLPDLWHNERFNHPTQPIVGVNWYEAN
AFCAWLTVQLRPQLDALGPNLVVRLPSEAEWQLAASQHSEREYPWGDEWRNDHANTSESELEQPTPVGMFPYGTWSDGPM
DLAGNVCEWTNSINRDPELEPQTTRNRRLQHRDLMVAVRGGSWFHNRYFARCRSRLQHRPFSHGPNIGVRLIIGHAE
>Mature_957_residues
MHDVERIRQKIINLQARRAQESDQDLIEALDQMIGQHQHQLSLLAQQAAAVLEPPAPAATQGQVYGSSVMTNLGHVWINQ
VFNAPLSTGERTDQLILHYLAHVQGNADRLVLGTDVQDSDQERMSLQRVFTMLQADFYGPIAGDALLQSLLLGSSQPRPQ
LQDSILKALNQIQHQRSVILGVPGGGKTTVVSYLASAQAAALLDPSKAEFLHSQGWMHTKLVPVRVRLKHVQPPADPEQQ
TADAFWEVVTELQLAGRFGQRAINSDVGFQRIEVERQQRLQDAIEELLTNGNGLLLLDGLDEVQPEHLAAVKRCIEHAQR
MFHKSRIIVTCRVFDYEHPLPPPFPSRQLYDWPTIQLMPFDLTAQHVYITNYYSELGRLHASHADIVSIRKKHAKLHAEL
TKSGMLHELTRTPLLLALTVHVNMVHTDLPESEGKLLHICIDELLKRRAPEAIAVSLEDLYDLVALLGYYAHSQEEIQGK
ALLSLQQINMVVQRYYSDRYPHPNQIHMLAQAVGNATLRLINSNGLLQEASNNQQDNPHYDFAHRLFQQFLAGMYLLNQE
RHDECIERAGSEHWRVCLHYMANFAPYIQKQSFIFGVIQDLLGGMPDEQVQGSHLLLAIGKAKVASAGRRNLWQQAVNHL
KNIGGLSGSSRGVRRWAPPRIAFPTRLRAALVLGAIGDTRFIGEDGALIALTERVVCIHAGSVELEDPHSRPQTYSVERF
WMSRYLLTNFEYSQFIAARGYLDDQWWQNDDARHWRRGDPSWLHGLPPWAAPRRLPDLWHNERFNHPTQPIVGVNWYEAN
AFCAWLTVQLRPQLDALGPNLVVRLPSEAEWQLAASQHSEREYPWGDEWRNDHANTSESELEQPTPVGMFPYGTWSDGPM
DLAGNVCEWTNSINRDPELEPQTTRNRRLQHRDLMVAVRGGSWFHNRYFARCRSRLQHRPFSHGPNIGVRLIIGHAE

Specific function: Unknown

COG id: COG1262

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI257470975, Length=260, Percent_Identity=24.2307692307692, Blast_Score=70, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 108679; Mature: 108679

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDVERIRQKIINLQARRAQESDQDLIEALDQMIGQHQHQLSLLAQQAAAVLEPPAPAAT
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QGQVYGSSVMTNLGHVWINQVFNAPLSTGERTDQLILHYLAHVQGNADRLVLGTDVQDSD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCH
QERMSLQRVFTMLQADFYGPIAGDALLQSLLLGSSQPRPQLQDSILKALNQIQHQRSVIL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEE
GVPGGGKTTVVSYLASAQAAALLDPSKAEFLHSQGWMHTKLVPVRVRLKHVQPPADPEQQ
ECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCHH
TADAFWEVVTELQLAGRFGQRAINSDVGFQRIEVERQQRLQDAIEELLTNGNGLLLLDGL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
DEVQPEHLAAVKRCIEHAQRMFHKSRIIVTCRVFDYEHPLPPPFPSRQLYDWPTIQLMPF
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEC
DLTAQHVYITNYYSELGRLHASHADIVSIRKKHAKLHAELTKSGMLHELTRTPLLLALTV
CCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEE
HVNMVHTDLPESEGKLLHICIDELLKRRAPEAIAVSLEDLYDLVALLGYYAHSQEEIQGK
EEEEEECCCCCCCCCEEHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHCCHHHHCHH
ALLSLQQINMVVQRYYSDRYPHPNQIHMLAQAVGNATLRLINSNGLLQEASNNQQDNPHY
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCH
DFAHRLFQQFLAGMYLLNQERHDECIERAGSEHWRVCLHYMANFAPYIQKQSFIFGVIQD
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGGMPDEQVQGSHLLLAIGKAKVASAGRRNLWQQAVNHLKNIGGLSGSSRGVRRWAPPR
HHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
IAFPTRLRAALVLGAIGDTRFIGEDGALIALTERVVCIHAGSVELEDPHSRPQTYSVERF
CCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECEEEEEECCCEEECCCCCCCCCCHHHHH
WMSRYLLTNFEYSQFIAARGYLDDQWWQNDDARHWRRGDPSWLHGLPPWAAPRRLPDLWH
HHHHHHHHCCCHHHHHHHCCCCCCHHCCCCCCHHHCCCCCCHHCCCCCCCCCCCCHHHHC
NERFNHPTQPIVGVNWYEANAFCAWLTVQLRPQLDALGPNLVVRLPSEAEWQLAASQHSE
CCCCCCCCCCEEECEEEECCEEEEEEEEEECCCHHHCCCCEEEECCCCCCHHHHHHHCCC
REYPWGDEWRNDHANTSESELEQPTPVGMFPYGTWSDGPMDLAGNVCEWTNSINRDPELE
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCCCCC
PQTTRNRRLQHRDLMVAVRGGSWFHNRYFARCRSRLQHRPFSHGPNIGVRLIIGHAE
CCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MHDVERIRQKIINLQARRAQESDQDLIEALDQMIGQHQHQLSLLAQQAAAVLEPPAPAAT
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QGQVYGSSVMTNLGHVWINQVFNAPLSTGERTDQLILHYLAHVQGNADRLVLGTDVQDSD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCH
QERMSLQRVFTMLQADFYGPIAGDALLQSLLLGSSQPRPQLQDSILKALNQIQHQRSVIL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEE
GVPGGGKTTVVSYLASAQAAALLDPSKAEFLHSQGWMHTKLVPVRVRLKHVQPPADPEQQ
ECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCHH
TADAFWEVVTELQLAGRFGQRAINSDVGFQRIEVERQQRLQDAIEELLTNGNGLLLLDGL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
DEVQPEHLAAVKRCIEHAQRMFHKSRIIVTCRVFDYEHPLPPPFPSRQLYDWPTIQLMPF
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEC
DLTAQHVYITNYYSELGRLHASHADIVSIRKKHAKLHAELTKSGMLHELTRTPLLLALTV
CCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEE
HVNMVHTDLPESEGKLLHICIDELLKRRAPEAIAVSLEDLYDLVALLGYYAHSQEEIQGK
EEEEEECCCCCCCCCEEHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHCCHHHHCHH
ALLSLQQINMVVQRYYSDRYPHPNQIHMLAQAVGNATLRLINSNGLLQEASNNQQDNPHY
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCH
DFAHRLFQQFLAGMYLLNQERHDECIERAGSEHWRVCLHYMANFAPYIQKQSFIFGVIQD
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGGMPDEQVQGSHLLLAIGKAKVASAGRRNLWQQAVNHLKNIGGLSGSSRGVRRWAPPR
HHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
IAFPTRLRAALVLGAIGDTRFIGEDGALIALTERVVCIHAGSVELEDPHSRPQTYSVERF
CCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECEEEEEECCCEEECCCCCCCCCCHHHHH
WMSRYLLTNFEYSQFIAARGYLDDQWWQNDDARHWRRGDPSWLHGLPPWAAPRRLPDLWH
HHHHHHHHCCCHHHHHHHCCCCCCHHCCCCCCHHHCCCCCCHHCCCCCCCCCCCCHHHHC
NERFNHPTQPIVGVNWYEANAFCAWLTVQLRPQLDALGPNLVVRLPSEAEWQLAASQHSE
CCCCCCCCCCEEECEEEECCEEEEEEEEEECCCHHHCCCCEEEECCCCCCHHHHHHHCCC
REYPWGDEWRNDHANTSESELEQPTPVGMFPYGTWSDGPMDLAGNVCEWTNSINRDPELE
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCCCCC
PQTTRNRRLQHRDLMVAVRGGSWFHNRYFARCRSRLQHRPFSHGPNIGVRLIIGHAE
CCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA