Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899722
Identifier: 159899722
GI number: 159899722
Start: 4051194
End: 4051769
Strand: Direct
Name: 159899722
Synonym: Haur_3204
Alternate gene names: NA
Gene position: 4051194-4051769 (Clockwise)
Preceding gene: 159899721
Following gene: 159899723
Centisome position: 63.83
GC content: 50.52
Gene sequence:
>576_bases ATGCGTTCAACCATTCGTGGATTGGTAACCCAAATTGCCCCCTTAGATTTACGCGAGCAGGCCGATTGCAACGAAACCTT GGCGTGGATCGATAGCGATGCACCGTTATTTCGCACGGCCAAGCCGGCAACCCCACCGATGCACTTAGTTTCCTACATTG TGGTCTACGATCCGACGACTGTCCAGATTTTATTGGTCGATCATCGCAATGCTCAATTGTGGTTGCCGTGTGGCGGCCAT GTTGAGCCAGATGAACATCCAGCAATCACCGTGATTCGTGAGATCGAAGAAGAATTGGGTATTCAAGCTGAGTTTTATTG GCAAGATCCCTGCTTCATCACCGTAACCGAAACAGTTGGGCTAACGGCGGGCCATATTGACGTTTCGCTGTGGTATGTCG TGCAAGCTGATTCGCAACAACCATTGGCCTACGATCAGGCTGAATTTAATCAAGTTCGCTGGTTTGCGCTCGATCAACTG CCGCTAGAACGCAGCGATCCACAGCTTGGGCGCTTTATTAGCAAGTTTCAACGGTTGCTCAAACGCGAAGCGCCACGACT ATTGGCAGTGCGTTAA
Upstream 100 bases:
>100_bases TAATGGCAGCAGAATAATTCGGGTAATTCGTGGCTAAAAAGCCTTGGTGCGCTTCGTGTCCTTCGTGGATCAAAATGAGA ATTGATAGTTGGAGGAAGTT
Downstream 100 bases:
>100_bases CATTTTGTTTAAGCAGCTTTTAAGGCATTCAAAGGCCTAAAGCTGCGTGGTATAATCTAGCGATGCAGCCGTGCTGCCGA TATTCAGACACCACGAGGTA
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT Domain-Containing Protein
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRSTIRGLVTQIAPLDLREQADCNETLAWIDSDAPLFRTAKPATPPMHLVSYIVVYDPTTVQILLVDHRNAQLWLPCGGH VEPDEHPAITVIREIEEELGIQAEFYWQDPCFITVTETVGLTAGHIDVSLWYVVQADSQQPLAYDQAEFNQVRWFALDQL PLERSDPQLGRFISKFQRLLKREAPRLLAVR
Sequences:
>Translated_191_residues MRSTIRGLVTQIAPLDLREQADCNETLAWIDSDAPLFRTAKPATPPMHLVSYIVVYDPTTVQILLVDHRNAQLWLPCGGH VEPDEHPAITVIREIEEELGIQAEFYWQDPCFITVTETVGLTAGHIDVSLWYVVQADSQQPLAYDQAEFNQVRWFALDQL PLERSDPQLGRFISKFQRLLKREAPRLLAVR >Mature_191_residues MRSTIRGLVTQIAPLDLREQADCNETLAWIDSDAPLFRTAKPATPPMHLVSYIVVYDPTTVQILLVDHRNAQLWLPCGGH VEPDEHPAITVIREIEEELGIQAEFYWQDPCFITVTETVGLTAGHIDVSLWYVVQADSQQPLAYDQAEFNQVRWFALDQL PLERSDPQLGRFISKFQRLLKREAPRLLAVR
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21832; Mature: 21832
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTIRGLVTQIAPLDLREQADCNETLAWIDSDAPLFRTAKPATPPMHLVSYIVVYDPTT CCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCHHHHEEEEEEECCCE VQILLVDHRNAQLWLPCGGHVEPDEHPAITVIREIEEELGIQAEFYWQDPCFITVTETVG EEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCC LTAGHIDVSLWYVVQADSQQPLAYDQAEFNQVRWFALDQLPLERSDPQLGRFISKFQRLL EEECCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHH KREAPRLLAVR HHCCCCEEECC >Mature Secondary Structure MRSTIRGLVTQIAPLDLREQADCNETLAWIDSDAPLFRTAKPATPPMHLVSYIVVYDPTT CCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCHHHHEEEEEEECCCE VQILLVDHRNAQLWLPCGGHVEPDEHPAITVIREIEEELGIQAEFYWQDPCFITVTETVG EEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCC LTAGHIDVSLWYVVQADSQQPLAYDQAEFNQVRWFALDQLPLERSDPQLGRFISKFQRLL EEECCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHH KREAPRLLAVR HHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA