Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is glcK [H]
Identifier: 159899706
GI number: 159899706
Start: 4033255
End: 4034211
Strand: Direct
Name: glcK [H]
Synonym: Haur_3188
Alternate gene names: 159899706
Gene position: 4033255-4034211 (Clockwise)
Preceding gene: 159899704
Following gene: 159899707
Centisome position: 63.55
GC content: 54.55
Gene sequence:
>957_bases ATGGCATTTGCAATCGGGATTGATCTCGGGGGCACGCATTTACGTGCGGCCTTAGTTGACCGAGATGGTGAAATTCTTGC TCATGAACGGATTCGCACCGAAGCGCATGAAGGTGCTGAAGCAGTTGTTGGTCGGATTACTCAATTAATTAACGCCATGA TCGCTGCGGCGAATGGTGCAACAATTGTCGGCGCTGGCATCGCCGCACCTGGCCCACTCAACCCCTTTACCGGTACGGTC ATTACCATGCCCAACTTGCCAGGTTGGGAGAACTTCCCCATCCGCGATCGAATCGCCGCCCAAGTTCCGTTTCCAGTCGT GCTCGGCAATGATGCCAATTTGGCTGCTGTCGGCGAATGGTTATTCGGCGGTGGTCGTGGCATGCAAAATATGATTTACG TCACGATCAGCACGGGCGTTGGTGGTGGGGTCATTTGTGATGGTCGGTTGTTGCTCGGTCACAATGGCTTTGCCGCCGAA GTTGGTCACATGGTGCTCGACCCGCATGGCTTTGCACCCGCCACGGCCACCCCAGCTGGTTCGTGGGAAGCGCTCGCATC AGGCACATTTTTGGCCTACCACGCTGCCGAAGCGATGCGAGCAGGCACTGCCACCGTACTTAATCAATTAACCACTCCCG ATGCCGTCACCACCCATCATTTAGATCTGGCGGCGCAACAAGGCGATGAGTTGGCAATTCGCTTAATCGAAAATGCTGGC TTTTGGTGTGGGATTGCCTTCGTCAATTTGCTGCATATGTTCAGCCCTGAAGCGATTTTCGTGGGCGGCGGGGTTTCCAA CTTAGGCGATCGTTTGCTCAACCCAGCTCGCGCCGAAATTACCAAACGCGCCTTGCCCGGCTATCGCAATGTGCCAATTC ATCAAACCAAGATGGGCGATAATCTAGGGGTGCTTGGCGCTGCTGCCTATGCATTTAGCTCAATCCAACAAGCCTAA
Upstream 100 bases:
>100_bases ATTGATCATCTGGGTGAATGTCTATAGGCAGAAAGCCCAAAATGCCCTGTGCTATAATTGCGCAATTAAAAGATCCGCAT GAAAGGTATTGGTTTTTCCT
Downstream 100 bases:
>100_bases TTTTAGCATCAAGCCGCTCAGTTCCAAAGTCTCCTGACAATGCGCCTTTGGGTCTTGGCGGCTTGCCGTTTTTAGCACAA AGGATGCCTGCATGTCGTCA
Product: ROK family protein
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MAFAIGIDLGGTHLRAALVDRDGEILAHERIRTEAHEGAEAVVGRITQLINAMIAAANGATIVGAGIAAPGPLNPFTGTV ITMPNLPGWENFPIRDRIAAQVPFPVVLGNDANLAAVGEWLFGGGRGMQNMIYVTISTGVGGGVICDGRLLLGHNGFAAE VGHMVLDPHGFAPATATPAGSWEALASGTFLAYHAAEAMRAGTATVLNQLTTPDAVTTHHLDLAAQQGDELAIRLIENAG FWCGIAFVNLLHMFSPEAIFVGGGVSNLGDRLLNPARAEITKRALPGYRNVPIHQTKMGDNLGVLGAAAYAFSSIQQA
Sequences:
>Translated_318_residues MAFAIGIDLGGTHLRAALVDRDGEILAHERIRTEAHEGAEAVVGRITQLINAMIAAANGATIVGAGIAAPGPLNPFTGTV ITMPNLPGWENFPIRDRIAAQVPFPVVLGNDANLAAVGEWLFGGGRGMQNMIYVTISTGVGGGVICDGRLLLGHNGFAAE VGHMVLDPHGFAPATATPAGSWEALASGTFLAYHAAEAMRAGTATVLNQLTTPDAVTTHHLDLAAQQGDELAIRLIENAG FWCGIAFVNLLHMFSPEAIFVGGGVSNLGDRLLNPARAEITKRALPGYRNVPIHQTKMGDNLGVLGAAAYAFSSIQQA >Mature_317_residues AFAIGIDLGGTHLRAALVDRDGEILAHERIRTEAHEGAEAVVGRITQLINAMIAAANGATIVGAGIAAPGPLNPFTGTVI TMPNLPGWENFPIRDRIAAQVPFPVVLGNDANLAAVGEWLFGGGRGMQNMIYVTISTGVGGGVICDGRLLLGHNGFAAEV GHMVLDPHGFAPATATPAGSWEALASGTFLAYHAAEAMRAGTATVLNQLTTPDAVTTHHLDLAAQQGDELAIRLIENAGF WCGIAFVNLLHMFSPEAIFVGGGVSNLGDRLLNPARAEITKRALPGYRNVPIHQTKMGDNLGVLGAAAYAFSSIQQA
Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI190014632, Length=268, Percent_Identity=31.3432835820896, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4885285, Length=268, Percent_Identity=31.3432835820896, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI298566315, Length=268, Percent_Identity=31.3432835820896, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI298566325, Length=268, Percent_Identity=31.3432835820896, Blast_Score=100, Evalue=3e-21, Organism=Escherichia coli, GI1786891, Length=313, Percent_Identity=26.1980830670927, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87081733, Length=316, Percent_Identity=30.379746835443, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787878, Length=249, Percent_Identity=27.710843373494, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI87082230, Length=265, Percent_Identity=32.0754716981132, Blast_Score=75, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 33036; Mature: 32905
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFAIGIDLGGTHLRAALVDRDGEILAHERIRTEAHEGAEAVVGRITQLINAMIAAANGA CEEEEEECCCCCEEEEEEECCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC TIVGAGIAAPGPLNPFTGTVITMPNLPGWENFPIRDRIAAQVPFPVVLGNDANLAAVGEW EEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEECCCCCHHHHHHH LFGGGRGMQNMIYVTISTGVGGGVICDGRLLLGHNGFAAEVGHMVLDPHGFAPATATPAG HHCCCCCCCEEEEEEEECCCCCCEEECCEEEEECCCCHHHHCCEEECCCCCCCCCCCCCC SWEALASGTFLAYHAAEAMRAGTATVLNQLTTPDAVTTHHLDLAAQQGDELAIRLIENAG CCHHHHCCCEEEHHHHHHHHCCHHHHHHHCCCCCCEEEEEHHHHHCCCCCEEEEEHHCCC FWCGIAFVNLLHMFSPEAIFVGGGVSNLGDRLLNPARAEITKRALPGYRNVPIHQTKMGD CCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC NLGVLGAAAYAFSSIQQA CCCHHHHHHHHHHHHHCC >Mature Secondary Structure AFAIGIDLGGTHLRAALVDRDGEILAHERIRTEAHEGAEAVVGRITQLINAMIAAANGA EEEEEECCCCCEEEEEEECCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC TIVGAGIAAPGPLNPFTGTVITMPNLPGWENFPIRDRIAAQVPFPVVLGNDANLAAVGEW EEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEECCCCCHHHHHHH LFGGGRGMQNMIYVTISTGVGGGVICDGRLLLGHNGFAAEVGHMVLDPHGFAPATATPAG HHCCCCCCCEEEEEEEECCCCCCEEECCEEEEECCCCHHHHCCEEECCCCCCCCCCCCCC SWEALASGTFLAYHAAEAMRAGTATVLNQLTTPDAVTTHHLDLAAQQGDELAIRLIENAG CCHHHHCCCEEEHHHHHHHHCCHHHHHHHCCCCCCEEEEEHHHHHCCCCCEEEEEHHCCC FWCGIAFVNLLHMFSPEAIFVGGGVSNLGDRLLNPARAEITKRALPGYRNVPIHQTKMGD CCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC NLGVLGAAAYAFSSIQQA CCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]