Click here to switch to the map view.

The map label for this gene is 159899698

Identifier: 159899698

GI number: 159899698

Start: 4020308

End: 4022248

Strand: Direct

Name: 159899698

Synonym: Haur_3180

Alternate gene names: NA

Gene position: 4020308-4022248 (Clockwise)

Preceding gene: 159899697

Following gene: 159899700

Centisome position: 63.35

GC content: 53.43

Gene sequence:

>1941_bases
ATGTATTTCATGCTAAAGATCGTGCTACTCCAACTTCCAGTGCCCAGCAATCCGGCGGCGAATGTGCCGCTGGCAGCGGG
CTACCTCAAAGCATGGGCGTACAACCAAGGCTTACTTGAGCGTATGCAAATTGAGATTGTGCCACGTGATATTGCCGACC
GTGGTGGTGATCGCCTGATTTGTAATTGGATCATCGCTCAACAACCACACGTTCTTGGGATTTCGCTGTATACCTGGAAT
AGCGAACGTTCGTTGCATCTTGCTAGTCAACTCAAACAAGCATTACCAAATTTGATTGTGGTGGTTGGCGGCCCCGAAGT
GCAGCGCAATAACACCTGGGTTTTGCAACATCCAGCGGTCGATGTTGCAGTAGAAGGCGAGGGCGAACAAACCTTCAGCG
AATTACTGCTGGCGCTCGAACACCAGCACCAGCAAATTAGCTTGCCGATGCATAACCAAACCCAATTGCCCTACCCGCTG
GTGGCTGGCACATTGCAATATCACGCGAGCCAATTGCATGCTGGCTTACCCCGCCCCGCCATGGGGAGCCTTGATCCAAT
TCCATCGCCCTATTTGCTGGGCTTTTTGGAGCTACGGGCTGGCGAAATTGCCTTTATCGAATGTTCGCGCTGGTGTCCTT
ACGGCTGTACCTTCTGCTTGTATGGCCGCAACATGGGCACAAAATTGGGTGGTCGCATGTTTGGCAGCCAACGGGTGTTG
GATGAAGTGGCCTGGGCACGCCAGCAGGGCGCACGGGCAATTCATTTTGTTGAGGCGAATCTCAATTTGCTGCCCAATTT
TCGCGAATTGATGCGCGGCCTGCAAAGCATCAATCAGCCTGAACCAACCCCAATTTATGCCGAATTACGTGGCGAACACC
TTAAGCCAGAAAGTGTTGAGGCCTTGGTGCAAGCAGGCTTGACTGTGGCCGAAGTTGGCTTGCAAAGCGCCAATCGCACA
GCCTTGCAAGCCGTTGGGCGGCGTACCGACCTCGAAAAATGGGCCGAAGGCACGCGCCGTCTGTATCAGCATGATGTAGC
GGTGTTGCTCGATGTGATTTTGGGCTTGCCCGAAGATGATGCTGACAGCACCCATGCTACGATCGAATGGATTCAGCAGC
AGCAACTTGGCGATTACGATATTTTTACCTTGCAAGTATTACCTGGCACAGGCGTGCGCAACGATGCCGAACGCTTTGGC
ATGCACTTTCAAGATCGCCCACCCTACTACATTTTGGCCAATCATTGGCTCAACTACCAACAACTTCGCGCCCTACGCTG
GGATTTACGTGAACAAGCCGGGCTTGATCCCTTGGCAATCGAAGGCATGCCGCAACCAGCTTGCGATGTTTGGCTCCAAG
CCTGCGAGCAAGCAATTCGCGTGATCGATCAGCCAATTCGTACTATCGTTTTGGATTGTCGGGCTGAATTCAGTTTAGAC
GAATGGCGGGAGCAAGGCCAACATTATGCTGATCAGGTTGCCAGCCATGTGGTGGTTATCGCGCATCATAGTGATTTGGC
CGTAATTGAGGCCTTTTGCTGGCCCATCGCCCAAGCCAACCTCACGATTCACTGGGATGTTGTGCTCGATCAGCCGATCG
CCCCCAACGCATTACGTCAACTCCAACAACGCTGGCCGCATACCATTGGCTACCTCGATCGCATAGCGGTCTATCGGCGC
TGGCAAGCCGATCCAGCGTGGGTGCAAGTCACACCGCGCTGGTGGATTCGCTGCGATTGGCAACAAGCGCTTGATCCATT
GAGCTACGAAGGCATTGCCGAGGTCGTTTGGCAGGTCGCAGCCGATCAAGCTAGTGTGGCGATTCCGGTTCTGAATCGCC
GGGGTGGCACGGGGATTGTGATTGAAGCTGAGCAATTTGAGCCAACATGGCAGGAACAAAGTGAGCATTTAGCAATTTTG
GCTCCCCTGCCACACGATTAA

Upstream 100 bases:

>100_bases
CAGGGGGTGAGGGCAGGCTAGCCGTTGTTCATGCGATAAACCATGACACATAGAACATAGCGAGATTGTGGTTACTCTGC
GCCTCTGCGTTTAAACAGAA

Downstream 100 bases:

>100_bases
ATAAATTCCCTCACCCCCAGCCTTCTCCCACTGCGGCGGGCGAGGGGAGCAAAATGAGCATAGGCCCCCTCTCCCGCGTG
CGGGATGAGGGGGCCAGGGG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MYFMLKIVLLQLPVPSNPAANVPLAAGYLKAWAYNQGLLERMQIEIVPRDIADRGGDRLICNWIIAQQPHVLGISLYTWN
SERSLHLASQLKQALPNLIVVVGGPEVQRNNTWVLQHPAVDVAVEGEGEQTFSELLLALEHQHQQISLPMHNQTQLPYPL
VAGTLQYHASQLHAGLPRPAMGSLDPIPSPYLLGFLELRAGEIAFIECSRWCPYGCTFCLYGRNMGTKLGGRMFGSQRVL
DEVAWARQQGARAIHFVEANLNLLPNFRELMRGLQSINQPEPTPIYAELRGEHLKPESVEALVQAGLTVAEVGLQSANRT
ALQAVGRRTDLEKWAEGTRRLYQHDVAVLLDVILGLPEDDADSTHATIEWIQQQQLGDYDIFTLQVLPGTGVRNDAERFG
MHFQDRPPYYILANHWLNYQQLRALRWDLREQAGLDPLAIEGMPQPACDVWLQACEQAIRVIDQPIRTIVLDCRAEFSLD
EWREQGQHYADQVASHVVVIAHHSDLAVIEAFCWPIAQANLTIHWDVVLDQPIAPNALRQLQQRWPHTIGYLDRIAVYRR
WQADPAWVQVTPRWWIRCDWQQALDPLSYEGIAEVVWQVAADQASVAIPVLNRRGGTGIVIEAEQFEPTWQEQSEHLAIL
APLPHD

Sequences:

>Translated_646_residues
MYFMLKIVLLQLPVPSNPAANVPLAAGYLKAWAYNQGLLERMQIEIVPRDIADRGGDRLICNWIIAQQPHVLGISLYTWN
SERSLHLASQLKQALPNLIVVVGGPEVQRNNTWVLQHPAVDVAVEGEGEQTFSELLLALEHQHQQISLPMHNQTQLPYPL
VAGTLQYHASQLHAGLPRPAMGSLDPIPSPYLLGFLELRAGEIAFIECSRWCPYGCTFCLYGRNMGTKLGGRMFGSQRVL
DEVAWARQQGARAIHFVEANLNLLPNFRELMRGLQSINQPEPTPIYAELRGEHLKPESVEALVQAGLTVAEVGLQSANRT
ALQAVGRRTDLEKWAEGTRRLYQHDVAVLLDVILGLPEDDADSTHATIEWIQQQQLGDYDIFTLQVLPGTGVRNDAERFG
MHFQDRPPYYILANHWLNYQQLRALRWDLREQAGLDPLAIEGMPQPACDVWLQACEQAIRVIDQPIRTIVLDCRAEFSLD
EWREQGQHYADQVASHVVVIAHHSDLAVIEAFCWPIAQANLTIHWDVVLDQPIAPNALRQLQQRWPHTIGYLDRIAVYRR
WQADPAWVQVTPRWWIRCDWQQALDPLSYEGIAEVVWQVAADQASVAIPVLNRRGGTGIVIEAEQFEPTWQEQSEHLAIL
APLPHD
>Mature_646_residues
MYFMLKIVLLQLPVPSNPAANVPLAAGYLKAWAYNQGLLERMQIEIVPRDIADRGGDRLICNWIIAQQPHVLGISLYTWN
SERSLHLASQLKQALPNLIVVVGGPEVQRNNTWVLQHPAVDVAVEGEGEQTFSELLLALEHQHQQISLPMHNQTQLPYPL
VAGTLQYHASQLHAGLPRPAMGSLDPIPSPYLLGFLELRAGEIAFIECSRWCPYGCTFCLYGRNMGTKLGGRMFGSQRVL
DEVAWARQQGARAIHFVEANLNLLPNFRELMRGLQSINQPEPTPIYAELRGEHLKPESVEALVQAGLTVAEVGLQSANRT
ALQAVGRRTDLEKWAEGTRRLYQHDVAVLLDVILGLPEDDADSTHATIEWIQQQQLGDYDIFTLQVLPGTGVRNDAERFG
MHFQDRPPYYILANHWLNYQQLRALRWDLREQAGLDPLAIEGMPQPACDVWLQACEQAIRVIDQPIRTIVLDCRAEFSLD
EWREQGQHYADQVASHVVVIAHHSDLAVIEAFCWPIAQANLTIHWDVVLDQPIAPNALRQLQQRWPHTIGYLDRIAVYRR
WQADPAWVQVTPRWWIRCDWQQALDPLSYEGIAEVVWQVAADQASVAIPVLNRRGGTGIVIEAEQFEPTWQEQSEHLAIL
APLPHD

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 73036; Mature: 73036

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFMLKIVLLQLPVPSNPAANVPLAAGYLKAWAYNQGLLERMQIEIVPRDIADRGGDRLI
CHHEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHEEEEECHHHHCCCCCEEE
CNWIIAQQPHVLGISLYTWNSERSLHLASQLKQALPNLIVVVGGPEVQRNNTWVLQHPAV
EEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCEECCCEEEEECCCE
DVAVEGEGEQTFSELLLALEHQHQQISLPMHNQTQLPYPLVAGTLQYHASQLHAGLPRPA
EEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
MGSLDPIPSPYLLGFLELRAGEIAFIECSRWCPYGCTFCLYGRNMGTKLGGRMFGSQRVL
CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHCCHHHHH
DEVAWARQQGARAIHFVEANLNLLPNFRELMRGLQSINQPEPTPIYAELRGEHLKPESVE
HHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEHCCCCCCCCHHHHH
ALVQAGLTVAEVGLQSANRTALQAVGRRTDLEKWAEGTRRLYQHDVAVLLDVILGLPEDD
HHHHCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ADSTHATIEWIQQQQLGDYDIFTLQVLPGTGVRNDAERFGMHFQDRPPYYILANHWLNYQ
CCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCCEEEEECCCCCHH
QLRALRWDLREQAGLDPLAIEGMPQPACDVWLQACEQAIRVIDQPIRTIVLDCRAEFSLD
HHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EWREQGQHYADQVASHVVVIAHHSDLAVIEAFCWPIAQANLTIHWDVVLDQPIAPNALRQ
HHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHH
LQQRWPHTIGYLDRIAVYRRWQADPAWVQVTPRWWIRCDWQQALDPLSYEGIAEVVWQVA
HHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEHHHHCCCCCHHHHHHHHHHHH
ADQASVAIPVLNRRGGTGIVIEAEQFEPTWQEQSEHLAILAPLPHD
CCCCCEEEEEEECCCCCEEEEEECCCCCCHHCCCCCEEEEECCCCC
>Mature Secondary Structure
MYFMLKIVLLQLPVPSNPAANVPLAAGYLKAWAYNQGLLERMQIEIVPRDIADRGGDRLI
CHHEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHEEEEECHHHHCCCCCEEE
CNWIIAQQPHVLGISLYTWNSERSLHLASQLKQALPNLIVVVGGPEVQRNNTWVLQHPAV
EEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCEECCCEEEEECCCE
DVAVEGEGEQTFSELLLALEHQHQQISLPMHNQTQLPYPLVAGTLQYHASQLHAGLPRPA
EEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
MGSLDPIPSPYLLGFLELRAGEIAFIECSRWCPYGCTFCLYGRNMGTKLGGRMFGSQRVL
CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHCCHHHHH
DEVAWARQQGARAIHFVEANLNLLPNFRELMRGLQSINQPEPTPIYAELRGEHLKPESVE
HHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEHCCCCCCCCHHHHH
ALVQAGLTVAEVGLQSANRTALQAVGRRTDLEKWAEGTRRLYQHDVAVLLDVILGLPEDD
HHHHCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ADSTHATIEWIQQQQLGDYDIFTLQVLPGTGVRNDAERFGMHFQDRPPYYILANHWLNYQ
CCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCCEEEEECCCCCHH
QLRALRWDLREQAGLDPLAIEGMPQPACDVWLQACEQAIRVIDQPIRTIVLDCRAEFSLD
HHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EWREQGQHYADQVASHVVVIAHHSDLAVIEAFCWPIAQANLTIHWDVVLDQPIAPNALRQ
HHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHH
LQQRWPHTIGYLDRIAVYRRWQADPAWVQVTPRWWIRCDWQQALDPLSYEGIAEVVWQVA
HHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEHHHHCCCCCHHHHHHHHHHHH
ADQASVAIPVLNRRGGTGIVIEAEQFEPTWQEQSEHLAILAPLPHD
CCCCCEEEEEEECCCCCEEEEEECCCCCCHHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]