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The map label for this gene is pfyP [H]

Identifier: 159899642

GI number: 159899642

Start: 3941920

End: 3943059

Strand: Direct

Name: pfyP [H]

Synonym: Haur_3124

Alternate gene names: 159899642

Gene position: 3941920-3943059 (Clockwise)

Preceding gene: 159899641

Following gene: 159899643

Centisome position: 62.11

GC content: 46.14

Gene sequence:

>1140_bases
ATGCAACCTCGCCGCTGGATTCATCGATTGGTACTGGCAGGCACAAGCTTGATCTTTTTGGTCTTGCTTGTGCTGTTGGG
CTTTAATTTACAAACTTTAGGCATGGCAACGCGCTTTTTTACCCTTGATGGCGGTATTTGGAACCCAACTCAGCTTGAGC
GCGAAATTCTACGCTTGCGGGTAATTGCCAACGAAATTAGTATGGGCACGCCCAATTTAGGCAACGAGTTTGTGTTGCGA
CGTAATTTAGTTGGCAGCCGAATTAATGTACTGAGTGATTTTTATCGGGTTGAGCATGAAGATCAGCGCAGCATGCTCGA
ACGCAGCTCATTTGAGGTGATTAAGCGTGAATTTTTTACGCTGGAAAATCAAACTCGCTTCAATATCTCAGATCATTCGG
TACAAGCATTAATTCCTGTTTTAGTAAACATGGAATCCAATGCTCGCGTAATGGTCAATGAGCGCCGCCAAATTGTTGAT
CGAGCCTCGCAGTTTCAACGCCAATCGCTTGAACGCTTGCGAGTTACGCTCTTATTTATGCTTGGTGGCATTTTAATTCA
AGTACCGATTTTCTTTTTGTTGACGCGCCGCCGCTTTGATACGACCTTGCAAAAAGCCTATAGCACTTTGCAAGAGCGTT
CAACCGCGCTTGAGCAATCGCAACGCGAATTAGCAAGCTCACATACCCATGCCCAACAACAAAACGAGGCCTTGCAAAAA
ACCTTGGCCGATTTAGAGCACAGTATGGCTGAACGCAGCGCATTGCAAACCACCGTGCAGCAGATGCAGTTTCCGATTAT
TCCATTGCGCAATCGCATGGCAATTATGCCCGTAATTGGCAATTTGTCAGCTGAACGGATCAAAATTGCTACCGATTCGG
CTGGACATTATGTTGAAGCCAAACGGATCAAAATCTTGCTGTTTGATATAACTGGGGTTTCGGCGATTGATCAAGCGGCG
GCGGCTAGTATGCAGCAATTATTGCAAATGTTGCGTTTGCTCGGCTGTGAGCCAGTTTTGGTTGGGGTAACGCCCGCTGT
AGCCGAAGAATTGGTGCACACTGGCTTGATTCAGCAAAACTTACAAACCTACGCTAATTTGCAACAGGCAATTGAGGTTA
CCGCCAAAACAATTGAGTAG

Upstream 100 bases:

>100_bases
GCCCGTTGGAAATTGTTTTTCCATACCACGCCTACAAGCTTGAGCATGAAAAATATGTTGGTATGTGGATCTGGCAGTTG
CGGAGTATGGAGATTAAATA

Downstream 100 bases:

>100_bases
ATGCCAGTTCGGTTGTTGATCCACGAAGGACACGAAGAGCACGAAGGATACAGCAGGCGATGGGCTTTTGGCTAGCGACA
ATCATGGGAATACCTAAACG

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: Photoactive flavo-yellow protein; Phototropin homolog [H]

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MQPRRWIHRLVLAGTSLIFLVLLVLLGFNLQTLGMATRFFTLDGGIWNPTQLEREILRLRVIANEISMGTPNLGNEFVLR
RNLVGSRINVLSDFYRVEHEDQRSMLERSSFEVIKREFFTLENQTRFNISDHSVQALIPVLVNMESNARVMVNERRQIVD
RASQFQRQSLERLRVTLLFMLGGILIQVPIFFLLTRRRFDTTLQKAYSTLQERSTALEQSQRELASSHTHAQQQNEALQK
TLADLEHSMAERSALQTTVQQMQFPIIPLRNRMAIMPVIGNLSAERIKIATDSAGHYVEAKRIKILLFDITGVSAIDQAA
AASMQQLLQMLRLLGCEPVLVGVTPAVAEELVHTGLIQQNLQTYANLQQAIEVTAKTIE

Sequences:

>Translated_379_residues
MQPRRWIHRLVLAGTSLIFLVLLVLLGFNLQTLGMATRFFTLDGGIWNPTQLEREILRLRVIANEISMGTPNLGNEFVLR
RNLVGSRINVLSDFYRVEHEDQRSMLERSSFEVIKREFFTLENQTRFNISDHSVQALIPVLVNMESNARVMVNERRQIVD
RASQFQRQSLERLRVTLLFMLGGILIQVPIFFLLTRRRFDTTLQKAYSTLQERSTALEQSQRELASSHTHAQQQNEALQK
TLADLEHSMAERSALQTTVQQMQFPIIPLRNRMAIMPVIGNLSAERIKIATDSAGHYVEAKRIKILLFDITGVSAIDQAA
AASMQQLLQMLRLLGCEPVLVGVTPAVAEELVHTGLIQQNLQTYANLQQAIEVTAKTIE
>Mature_379_residues
MQPRRWIHRLVLAGTSLIFLVLLVLLGFNLQTLGMATRFFTLDGGIWNPTQLEREILRLRVIANEISMGTPNLGNEFVLR
RNLVGSRINVLSDFYRVEHEDQRSMLERSSFEVIKREFFTLENQTRFNISDHSVQALIPVLVNMESNARVMVNERRQIVD
RASQFQRQSLERLRVTLLFMLGGILIQVPIFFLLTRRRFDTTLQKAYSTLQERSTALEQSQRELASSHTHAQQQNEALQK
TLADLEHSMAERSALQTTVQQMQFPIIPLRNRMAIMPVIGNLSAERIKIATDSAGHYVEAKRIKILLFDITGVSAIDQAA
AASMQQLLQMLRLLGCEPVLVGVTPAVAEELVHTGLIQQNLQTYANLQQAIEVTAKTIE

Specific function: Exhibits the same spectroscopical features and blue- light induced photochemistry as plants phototropins, with the reversible formation of a blue-shifted photoproduct, assigned to an FMN-cysteine thiol adduct. Although it is a positive regulator in the ac

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR002645 [H]

Pfam domain/function: PF00989 PAS; PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 43143; Mature: 43143

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPRRWIHRLVLAGTSLIFLVLLVLLGFNLQTLGMATRFFTLDGGIWNPTQLEREILRLR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHH
VIANEISMGTPNLGNEFVLRRNLVGSRINVLSDFYRVEHEDQRSMLERSSFEVIKREFFT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LENQTRFNISDHSVQALIPVLVNMESNARVMVNERRQIVDRASQFQRQSLERLRVTLLFM
HCCCCEECCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGILIQVPIFFLLTRRRFDTTLQKAYSTLQERSTALEQSQRELASSHTHAQQQNEALQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLADLEHSMAERSALQTTVQQMQFPIIPLRNRMAIMPVIGNLSAERIKIATDSAGHYVEA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCCCEEEEEECCCCCEEEE
KRIKILLFDITGVSAIDQAAAASMQQLLQMLRLLGCEPVLVGVTPAVAEELVHTGLIQQN
CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHH
LQTYANLQQAIEVTAKTIE
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQPRRWIHRLVLAGTSLIFLVLLVLLGFNLQTLGMATRFFTLDGGIWNPTQLEREILRLR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHH
VIANEISMGTPNLGNEFVLRRNLVGSRINVLSDFYRVEHEDQRSMLERSSFEVIKREFFT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LENQTRFNISDHSVQALIPVLVNMESNARVMVNERRQIVDRASQFQRQSLERLRVTLLFM
HCCCCEECCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGILIQVPIFFLLTRRRFDTTLQKAYSTLQERSTALEQSQRELASSHTHAQQQNEALQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLADLEHSMAERSALQTTVQQMQFPIIPLRNRMAIMPVIGNLSAERIKIATDSAGHYVEA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCCCEEEEEECCCCCEEEE
KRIKILLFDITGVSAIDQAAAASMQQLLQMLRLLGCEPVLVGVTPAVAEELVHTGLIQQN
CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHH
LQTYANLQQAIEVTAKTIE
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 11157946; 11964249 [H]