Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899604
Identifier: 159899604
GI number: 159899604
Start: 3894302
End: 3894448
Strand: Direct
Name: 159899604
Synonym: Haur_3085
Alternate gene names: NA
Gene position: 3894302-3894448 (Clockwise)
Preceding gene: 159899603
Following gene: 159899605
Centisome position: 61.36
GC content: 46.26
Gene sequence:
>147_bases TTGACCTACACGCTTATTGGGGCCGCGATGGAAGTTCATCAGCAACTTGGGCCAGGTCTGCTAGAATCGGTATATCAAAA GGCCTTAGCTTATGAGTTGCAACAACGCCATGTTCTTTTTGTCGAACAGCAACATTTGCCTGTTTAG
Upstream 100 bases:
>100_bases ATTTTTAGCCACAGATTGACACAGATGACACAGATGACCATCGACTGGCATTGTGCGAATCACCAAAGGTGTCAAGATGC CTAAATTTATACACGGTGAG
Downstream 100 bases:
>100_bases TATAAACAAATCGTTGTTGGGGATTTTATCGCAGATTTTGTGGTTGAGCAGAGCCTCATTATTGAGATTAAAGCAATTGA TAAATTGCATCCCAATCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 47
Protein sequence:
>48_residues MTYTLIGAAMEVHQQLGPGLLESVYQKALAYELQQRHVLFVEQQHLPV
Sequences:
>Translated_48_residues MTYTLIGAAMEVHQQLGPGLLESVYQKALAYELQQRHVLFVEQQHLPV >Mature_47_residues TYTLIGAAMEVHQQLGPGLLESVYQKALAYELQQRHVLFVEQQHLPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5479; Mature: 5348
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTLIGAAMEVHQQLGPGLLESVYQKALAYELQQRHVLFVEQQHLPV CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCC >Mature Secondary Structure TYTLIGAAMEVHQQLGPGLLESVYQKALAYELQQRHVLFVEQQHLPV CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA