Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is baeS [H]
Identifier: 159899581
GI number: 159899581
Start: 3868307
End: 3869683
Strand: Direct
Name: baeS [H]
Synonym: Haur_3062
Alternate gene names: 159899581
Gene position: 3868307-3869683 (Clockwise)
Preceding gene: 159899580
Following gene: 159899582
Centisome position: 60.95
GC content: 52.0
Gene sequence:
>1377_bases ATGAAACTGCAACGAAAATTATTATTAACCCACATCGCAGTTGCCCTCGTTGCAATTTTGCTGATTACGGCGGTGGCCAA CTTCACCGTCAATCGCTATTTTAGCGATCTTGCGGCCAAACAGGCCAAACAAGCAGCCCAAGAGTTTGCGCCAACCTTGG CAACCTGCTACCAAATTATTGGCAGCTGGGATTTTAATGGCCAGCGTTGTATGCAGCTTGGGCCACGACCGTTCATGCCG CCGCAATTTCGCCATGTCGTGGTAGTTGATACCGCTGGTGAGATTGTTTTTGATAGCCGTGGACGCGGCCAAATTAATAA ACCAACCAACACCATTACCCAACGCGATATTGAACGTGGCGAATCAATTAATGCTGAAGATGGCACGGTGATTGGCACGG TGATTGTGCGACCCAATCAAGGCCAATTTGGCGCAGATGAAGATTATTTTTTGAGTATGGTGCGGCGTAATATTTGGTTG GCCGGAGCAATTACCGCCCTCTTAGCCTTGGCTATTGGCATCGGCCTGGCGCGAACCTTGGCCGCGCCGTTGCGCAGCCT GACTGCCGCCGTGCATCAACTGGCTCAGGGCGAACGTTCAGTTCAAGTTGACGATTCGGGCAACGATGAAATTGCCGAAT TAAGCCAAGCCTTTAACACCATGAGCAGCGAACTGCATCGCTCTGAGCAAGTGCGCCGCCAGATGGTTGCCGATATTGCT CACGAATTGCGTACCCCTTTGAGCGTGCTGCAAATTGAGCTTGAAAGCATCGAGGATGGCGTGAGCAAGCCCACACCGGC GGTGATTAGCTCCTTGGGCGAGGAAGTACAACAACTTAATCATCTGATTGAAGATTTACGCACACTTTCCTTGGCCGATG CAGGCCAGTTGACTCTCAATCCAATTGAGCTAGAACCCCAAGATGTGGTCAATCGTGCGGTCAATCGTATGCAGTTGGCG GCACGCGAAAAACAATTGGAGCTAGCCAACGATAGCGCCGAACAGATCGATTTGGTCCATGCTGATCCATCACGCCTACA ACAAGTGCTGGTTAATCTTTTGCAAAATGCCGTTCGCTACACCCCGCAAGGTGGTAAAATTCGCGTGACCGCCCGCCAAA GTGCTGGTGAAGTTATTTTGGGTGTTCACGACACTGGTGCAGGCTTCGACCCAACCGAGGCTGCCACGATCTTCGAGCGC TTTTATCGCACCGATAAAGCCCGCGCTCGTGATACGGGCGGCACAGGCTTGGGCTTGGCAATCGTCAAAGGTCTCGTGAC CGCAATGGGTGGCCGGGTTTGGGCAACCAGTGTGCCGAACCAAGGTTCAAGTTTCTATGTTGCTTTACGAGCAATCAGCA CCAAGGAGGGTGTATGA
Upstream 100 bases:
>100_bases GCATATCAAAAATGTCCGCCGTAAGATCGAGCCAAATCCTAGCGTTCCGCGCTATATTTTGACGGTCTTTGGTGTGGGCT ACAAATTTGCGGAATAAGCT
Downstream 100 bases:
>100_bases CCGATTTGCCTGATGTAAGCGCAATGAACGAGTTTCAACGCGGCACACTTGCAGACACGCTTGGAATTAGCTTTACCGAA GTCAGTTTGGATCGCGTAGT
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MKLQRKLLLTHIAVALVAILLITAVANFTVNRYFSDLAAKQAKQAAQEFAPTLATCYQIIGSWDFNGQRCMQLGPRPFMP PQFRHVVVVDTAGEIVFDSRGRGQINKPTNTITQRDIERGESINAEDGTVIGTVIVRPNQGQFGADEDYFLSMVRRNIWL AGAITALLALAIGIGLARTLAAPLRSLTAAVHQLAQGERSVQVDDSGNDEIAELSQAFNTMSSELHRSEQVRRQMVADIA HELRTPLSVLQIELESIEDGVSKPTPAVISSLGEEVQQLNHLIEDLRTLSLADAGQLTLNPIELEPQDVVNRAVNRMQLA AREKQLELANDSAEQIDLVHADPSRLQQVLVNLLQNAVRYTPQGGKIRVTARQSAGEVILGVHDTGAGFDPTEAATIFER FYRTDKARARDTGGTGLGLAIVKGLVTAMGGRVWATSVPNQGSSFYVALRAISTKEGV
Sequences:
>Translated_458_residues MKLQRKLLLTHIAVALVAILLITAVANFTVNRYFSDLAAKQAKQAAQEFAPTLATCYQIIGSWDFNGQRCMQLGPRPFMP PQFRHVVVVDTAGEIVFDSRGRGQINKPTNTITQRDIERGESINAEDGTVIGTVIVRPNQGQFGADEDYFLSMVRRNIWL AGAITALLALAIGIGLARTLAAPLRSLTAAVHQLAQGERSVQVDDSGNDEIAELSQAFNTMSSELHRSEQVRRQMVADIA HELRTPLSVLQIELESIEDGVSKPTPAVISSLGEEVQQLNHLIEDLRTLSLADAGQLTLNPIELEPQDVVNRAVNRMQLA AREKQLELANDSAEQIDLVHADPSRLQQVLVNLLQNAVRYTPQGGKIRVTARQSAGEVILGVHDTGAGFDPTEAATIFER FYRTDKARARDTGGTGLGLAIVKGLVTAMGGRVWATSVPNQGSSFYVALRAISTKEGV >Mature_458_residues MKLQRKLLLTHIAVALVAILLITAVANFTVNRYFSDLAAKQAKQAAQEFAPTLATCYQIIGSWDFNGQRCMQLGPRPFMP PQFRHVVVVDTAGEIVFDSRGRGQINKPTNTITQRDIERGESINAEDGTVIGTVIVRPNQGQFGADEDYFLSMVRRNIWL AGAITALLALAIGIGLARTLAAPLRSLTAAVHQLAQGERSVQVDDSGNDEIAELSQAFNTMSSELHRSEQVRRQMVADIA HELRTPLSVLQIELESIEDGVSKPTPAVISSLGEEVQQLNHLIEDLRTLSLADAGQLTLNPIELEPQDVVNRAVNRMQLA AREKQLELANDSAEQIDLVHADPSRLQQVLVNLLQNAVRYTPQGGKIRVTARQSAGEVILGVHDTGAGFDPTEAATIFER FYRTDKARARDTGGTGLGLAIVKGLVTAMGGRVWATSVPNQGSSFYVALRAISTKEGV
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=473, Percent_Identity=34.0380549682875, Blast_Score=207, Evalue=9e-55, Organism=Escherichia coli, GI1786783, Length=308, Percent_Identity=29.8701298701299, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1786600, Length=236, Percent_Identity=32.6271186440678, Blast_Score=112, Evalue=7e-26, Organism=Escherichia coli, GI1789149, Length=324, Percent_Identity=26.2345679012346, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI145693157, Length=238, Percent_Identity=30.2521008403361, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI1787894, Length=298, Percent_Identity=30.8724832214765, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790346, Length=270, Percent_Identity=30.3703703703704, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1786912, Length=234, Percent_Identity=32.4786324786325, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1790861, Length=380, Percent_Identity=28.6842105263158, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI87082128, Length=290, Percent_Identity=29.6551724137931, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI87081816, Length=249, Percent_Identity=29.3172690763052, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=29.535864978903, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1788279, Length=294, Percent_Identity=25.8503401360544, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1789808, Length=271, Percent_Identity=28.0442804428044, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1788549, Length=221, Percent_Identity=27.1493212669683, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1788713, Length=255, Percent_Identity=27.0588235294118, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790551, Length=279, Percent_Identity=27.5985663082437, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI48994928, Length=248, Percent_Identity=28.2258064516129, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1789403, Length=293, Percent_Identity=28.6689419795222, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787374, Length=285, Percent_Identity=25.2631578947368, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49798; Mature: 49798
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQRKLLLTHIAVALVAILLITAVANFTVNRYFSDLAAKQAKQAAQEFAPTLATCYQII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSWDFNGQRCMQLGPRPFMPPQFRHVVVVDTAGEIVFDSRGRGQINKPTNTITQRDIERG HCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHCC ESINAEDGTVIGTVIVRPNQGQFGADEDYFLSMVRRNIWLAGAITALLALAIGIGLARTL CCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAPLRSLTAAVHQLAQGERSVQVDDSGNDEIAELSQAFNTMSSELHRSEQVRRQMVADIA HHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HELRTPLSVLQIELESIEDGVSKPTPAVISSLGEEVQQLNHLIEDLRTLSLADAGQLTLN HHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC PIELEPQDVVNRAVNRMQLAAREKQLELANDSAEQIDLVHADPSRLQQVLVNLLQNAVRY CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCHHHHHHHHHHHHHHHHHC TPQGGKIRVTARQSAGEVILGVHDTGAGFDPTEAATIFERFYRTDKARARDTGGTGLGLA CCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH IVKGLVTAMGGRVWATSVPNQGSSFYVALRAISTKEGV HHHHHHHHHCCEEEEECCCCCCCCEEEEEEEHHCCCCC >Mature Secondary Structure MKLQRKLLLTHIAVALVAILLITAVANFTVNRYFSDLAAKQAKQAAQEFAPTLATCYQII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSWDFNGQRCMQLGPRPFMPPQFRHVVVVDTAGEIVFDSRGRGQINKPTNTITQRDIERG HCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHCC ESINAEDGTVIGTVIVRPNQGQFGADEDYFLSMVRRNIWLAGAITALLALAIGIGLARTL CCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAPLRSLTAAVHQLAQGERSVQVDDSGNDEIAELSQAFNTMSSELHRSEQVRRQMVADIA HHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HELRTPLSVLQIELESIEDGVSKPTPAVISSLGEEVQQLNHLIEDLRTLSLADAGQLTLN HHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC PIELEPQDVVNRAVNRMQLAAREKQLELANDSAEQIDLVHADPSRLQQVLVNLLQNAVRY CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCHHHHHHHHHHHHHHHHHC TPQGGKIRVTARQSAGEVILGVHDTGAGFDPTEAATIFERFYRTDKARARDTGGTGLGLA CCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH IVKGLVTAMGGRVWATSVPNQGSSFYVALRAISTKEGV HHHHHHHHHCCEEEEECCCCCCCCEEEEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]