Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is zwf [H]
Identifier: 159899540
GI number: 159899540
Start: 3816262
End: 3817788
Strand: Direct
Name: zwf [H]
Synonym: Haur_3021
Alternate gene names: 159899540
Gene position: 3816262-3817788 (Clockwise)
Preceding gene: 159899539
Following gene: 159899541
Centisome position: 60.13
GC content: 51.67
Gene sequence:
>1527_bases GTGGAACAGCCAAATCCTTTGCGAGCAGGTTTACGAATTGCTCGCACCCCTGAAGCATGTACTGTGGTGATTTTCGGCGC GACCGGAGATCTCACTGCCCGTAAATTATTGCCTGCACTCTACAACCTCGCCCGTGAAGGCATGGTTCCAGCAGGCTTTT CGTTGCTTGGTGTTGGCCGTCGCCCATGGAGCGACGATGATTTTCGCGCTGAAATGCGCAAAAGTGCCGAGCAATTCTCA CGCGTCCAGCCAATTAATGAAGAAGTTTGGCAAACCTTTGCTGAAGGTTTGTTCTGGGTTGGCGGCGAGTTTGGCGATAT CAACACCTACGAGCAAATCGCCAGTCGCCTCGAACAAATCGATCAGCAACGGGGCACTGCTGGCAATCGGCTCTTTTATT TGGCGATTCCACCATCGTGGTTTGATGATGCGATTAGCAATTTGCAAAAGGTCAATCTGACCAACCAAAGCCATGGCTGG TCGCGAATTATCGTTGAAAAGCCGTTTGGTCACGATTACAAATCGGCCCAAGAACTCAACGATCTGGTCAGTCGCGCTTT TGATGAAAGCCAAGTCTATCGAATTGACCATTATCTTGGCAAAGAAACCGTCCAAAACCTGTTGGTGGCGCGGTTTGCCA ACGCCATTTTCGAGCCAATTTGGAACCGCAACTACATTGACCATGTGCAAATCACGGTCGCCGAAAGCCTTGGCATCGGC AGTCGCGCAGGGTTTTATGAGGAAGCTGGGGCATTGCGCGATATGATCACCAATCATATGATGCAATTGCTGACCCTGAC CGCCATGGAACCACCAGTTGAGTTTAACGAGCATGAAGTGCGCAGCGAAAAAGTCAAAGTGCTACATGCAATTCGCCCGA TGAATGCTACTGATGTTGATCAATTTGCGCTGCGTGCTCAATATGATCATGGTACAATCAATGGCGATGAAGTGCCCAGT TACTTGGCAGAGAAAGGGGTCAATCCAGCCTCACGCACACCCACATTCGTTGCACTCAAATTCGAGATCGACAATTGGCG CTGGGCGGGCGTACCATTCTACTTGCGCACTGGCAAACGGCTGGCTAAACGGGTCACCGAAATTGCGATTCAATTCAAAA AACCGCCGCTGCTGCTCTTCCCCGAAATCCGCGATGACATTGAATCGAACGTCTTAGCGCTGCGCATTCAGCCCAACGAA GGCATCACCCTCAAATTTAGCGCCAAACAACCAGGCCAACGCATGATCATCCATCCGGTTAATATGGATTTTCGCTATGG CTCATCGTTTGGGGTAGCTGCGCCCGAAGCTTACGAACGCTTGTTGCTCGATGCCATGCTCGGCGACGCAACCCTGTTTA CCCGCCGCGATGAGGTCGAAGCCCAATGGGCCTTGATGACTCCCATCCTTGAGCGCTGGGAAAACGACGGCGTTGAGCAC TTGCCACACTACGAGGCAGGCACGTGGGGGCCAGAGGAATCTGATCAATTTATGCAACGTGATGGCCGTGAGTGGCGCAA ATTGTAG
Upstream 100 bases:
>100_bases CCTCTGATCATTTAGTAAAACAGTGCTATGCTATAAGGCGCAACGGGGCTACACGGAAGGATGTAGCCCTGTCATTATGC GTGGTTCCTAAGGAGGGCTT
Downstream 100 bases:
>100_bases GAGGTGGCAACCATGATGGGCGAAATTTCCAATAGCCCACGTCCAGCCAATGTTGCTGAGATTGAAGATCAACTGCGCGA TTTGTGGCGTGAATTGGGCG
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MEQPNPLRAGLRIARTPEACTVVIFGATGDLTARKLLPALYNLAREGMVPAGFSLLGVGRRPWSDDDFRAEMRKSAEQFS RVQPINEEVWQTFAEGLFWVGGEFGDINTYEQIASRLEQIDQQRGTAGNRLFYLAIPPSWFDDAISNLQKVNLTNQSHGW SRIIVEKPFGHDYKSAQELNDLVSRAFDESQVYRIDHYLGKETVQNLLVARFANAIFEPIWNRNYIDHVQITVAESLGIG SRAGFYEEAGALRDMITNHMMQLLTLTAMEPPVEFNEHEVRSEKVKVLHAIRPMNATDVDQFALRAQYDHGTINGDEVPS YLAEKGVNPASRTPTFVALKFEIDNWRWAGVPFYLRTGKRLAKRVTEIAIQFKKPPLLLFPEIRDDIESNVLALRIQPNE GITLKFSAKQPGQRMIIHPVNMDFRYGSSFGVAAPEAYERLLLDAMLGDATLFTRRDEVEAQWALMTPILERWENDGVEH LPHYEAGTWGPEESDQFMQRDGREWRKL
Sequences:
>Translated_508_residues MEQPNPLRAGLRIARTPEACTVVIFGATGDLTARKLLPALYNLAREGMVPAGFSLLGVGRRPWSDDDFRAEMRKSAEQFS RVQPINEEVWQTFAEGLFWVGGEFGDINTYEQIASRLEQIDQQRGTAGNRLFYLAIPPSWFDDAISNLQKVNLTNQSHGW SRIIVEKPFGHDYKSAQELNDLVSRAFDESQVYRIDHYLGKETVQNLLVARFANAIFEPIWNRNYIDHVQITVAESLGIG SRAGFYEEAGALRDMITNHMMQLLTLTAMEPPVEFNEHEVRSEKVKVLHAIRPMNATDVDQFALRAQYDHGTINGDEVPS YLAEKGVNPASRTPTFVALKFEIDNWRWAGVPFYLRTGKRLAKRVTEIAIQFKKPPLLLFPEIRDDIESNVLALRIQPNE GITLKFSAKQPGQRMIIHPVNMDFRYGSSFGVAAPEAYERLLLDAMLGDATLFTRRDEVEAQWALMTPILERWENDGVEH LPHYEAGTWGPEESDQFMQRDGREWRKL >Mature_508_residues MEQPNPLRAGLRIARTPEACTVVIFGATGDLTARKLLPALYNLAREGMVPAGFSLLGVGRRPWSDDDFRAEMRKSAEQFS RVQPINEEVWQTFAEGLFWVGGEFGDINTYEQIASRLEQIDQQRGTAGNRLFYLAIPPSWFDDAISNLQKVNLTNQSHGW SRIIVEKPFGHDYKSAQELNDLVSRAFDESQVYRIDHYLGKETVQNLLVARFANAIFEPIWNRNYIDHVQITVAESLGIG SRAGFYEEAGALRDMITNHMMQLLTLTAMEPPVEFNEHEVRSEKVKVLHAIRPMNATDVDQFALRAQYDHGTINGDEVPS YLAEKGVNPASRTPTFVALKFEIDNWRWAGVPFYLRTGKRLAKRVTEIAIQFKKPPLLLFPEIRDDIESNVLALRIQPNE GITLKFSAKQPGQRMIIHPVNMDFRYGSSFGVAAPEAYERLLLDAMLGDATLFTRRDEVEAQWALMTPILERWENDGVEH LPHYEAGTWGPEESDQFMQRDGREWRKL
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=485, Percent_Identity=37.9381443298969, Blast_Score=334, Evalue=1e-91, Organism=Homo sapiens, GI108773793, Length=484, Percent_Identity=37.8099173553719, Blast_Score=334, Evalue=1e-91, Organism=Homo sapiens, GI52145310, Length=480, Percent_Identity=29.7916666666667, Blast_Score=174, Evalue=1e-43, Organism=Escherichia coli, GI1788158, Length=501, Percent_Identity=42.315369261477, Blast_Score=410, Evalue=1e-116, Organism=Caenorhabditis elegans, GI17538218, Length=484, Percent_Identity=38.0165289256198, Blast_Score=354, Evalue=8e-98, Organism=Saccharomyces cerevisiae, GI6324088, Length=495, Percent_Identity=35.959595959596, Blast_Score=309, Evalue=6e-85, Organism=Drosophila melanogaster, GI24643350, Length=480, Percent_Identity=36.6666666666667, Blast_Score=317, Evalue=2e-86, Organism=Drosophila melanogaster, GI24643352, Length=480, Percent_Identity=36.6666666666667, Blast_Score=316, Evalue=2e-86, Organism=Drosophila melanogaster, GI221513548, Length=477, Percent_Identity=31.4465408805031, Blast_Score=239, Evalue=3e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 57957; Mature: 57957
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQPNPLRAGLRIARTPEACTVVIFGATGDLTARKLLPALYNLAREGMVPAGFSLLGVGR CCCCCCHHHCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCC RPWSDDDFRAEMRKSAEQFSRVQPINEEVWQTFAEGLFWVGGEFGDINTYEQIASRLEQI CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHH DQQRGTAGNRLFYLAIPPSWFDDAISNLQKVNLTNQSHGWSRIIVEKPFGHDYKSAQELN HHHCCCCCCEEEEEEECCCHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCHHHHHHHH DLVSRAFDESQVYRIDHYLGKETVQNLLVARFANAIFEPIWNRNYIDHVQITVAESLGIG HHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCC SRAGFYEEAGALRDMITNHMMQLLTLTAMEPPVEFNEHEVRSEKVKVLHAIRPMNATDVD CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH QFALRAQYDHGTINGDEVPSYLAEKGVNPASRTPTFVALKFEIDNWRWAGVPFYLRTGKR HHHHHEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCEEECCCCCEEHHHHH LAKRVTEIAIQFKKPPLLLFPEIRDDIESNVLALRIQPNEGITLKFSAKQPGQRMIIHPV HHHHHHHHHHHCCCCCEEECCHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEC NMDFRYGSSFGVAAPEAYERLLLDAMLGDATLFTRRDEVEAQWALMTPILERWENDGVEH CCCEEECCCCCCCCHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHCCCCCCC LPHYEAGTWGPEESDQFMQRDGREWRKL CCCCCCCCCCCCCHHHHHHHCCHHHHCC >Mature Secondary Structure MEQPNPLRAGLRIARTPEACTVVIFGATGDLTARKLLPALYNLAREGMVPAGFSLLGVGR CCCCCCHHHCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCC RPWSDDDFRAEMRKSAEQFSRVQPINEEVWQTFAEGLFWVGGEFGDINTYEQIASRLEQI CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHH DQQRGTAGNRLFYLAIPPSWFDDAISNLQKVNLTNQSHGWSRIIVEKPFGHDYKSAQELN HHHCCCCCCEEEEEEECCCHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCHHHHHHHH DLVSRAFDESQVYRIDHYLGKETVQNLLVARFANAIFEPIWNRNYIDHVQITVAESLGIG HHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCC SRAGFYEEAGALRDMITNHMMQLLTLTAMEPPVEFNEHEVRSEKVKVLHAIRPMNATDVD CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH QFALRAQYDHGTINGDEVPSYLAEKGVNPASRTPTFVALKFEIDNWRWAGVPFYLRTGKR HHHHHEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCEEECCCCCEEHHHHH LAKRVTEIAIQFKKPPLLLFPEIRDDIESNVLALRIQPNEGITLKFSAKQPGQRMIIHPV HHHHHHHHHHHCCCCCEEECCHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEC NMDFRYGSSFGVAAPEAYERLLLDAMLGDATLFTRRDEVEAQWALMTPILERWENDGVEH CCCEEECCCCCCCCHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHCCCCCCC LPHYEAGTWGPEESDQFMQRDGREWRKL CCCCCCCCCCCCCHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]