Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is lon2
Identifier: 159899515
GI number: 159899515
Start: 3783092
End: 3785539
Strand: Direct
Name: lon2
Synonym: Haur_2996
Alternate gene names: 159899515
Gene position: 3783092-3785539 (Clockwise)
Preceding gene: 159899511
Following gene: 159899516
Centisome position: 59.61
GC content: 52.17
Gene sequence:
>2448_bases ATGGCAGATGATCGACAGTTGGTGGATGAAATTTCGGCAGCAACCACGCTGGAATTGCCAGTGCTTCCACTCATCAATAC CGTGCTTTTCCCAACAATGGTCACCCCACTTTTTGTAGCCCGCGAGCTATCAATGGCTGCGATCGAGGCGGCGATGAGCG CCGATCGGCAAATTGTCGCGGTAGCGCAACGCGCAATTGAAATCGAGGAGCACGATACCAGCCAACTGTATCAGGTCGGG GTGATTGCCCATATTGAGCGGGTGCTCAAACTGCCCGATGGCACAACCTCGGTCTTGGTGCAAGGCCAACAGCGGGTGCA AATTGTCGATTGGCTGGCAACTGAACCCTACATTAATGCGCAAGTGCAAATCATCGAGCCAGATCATGAATCGAGTTTGG CGATTGAGGCCATGATGCGCGGCGTATTGGCTTCCTACGAAAAAGTGGTCAAACTAAGCCGCACTATGCCCGATGATGCC TATGTTGCGGCGCTCAACCTTGAAGATGCGAGCGCCTTGGCCGACTTAATTGCCTCGACCTTGCCGCTTGATATCGTGCG TCGCCAACAATTGCTCGAACTTTTTGAGGTCGAGGAGCGCTTGCGGCGGCTGAGTGTGGTGCTCTCACAAGAGATTGATG TGCTTGAATTAGAGCATCATATTCAAAATCAGGTGCAAAAAGAGGTCGATAAGTCGCAACGTGATTTCTTCCTGCGCGAA CAACTCAAGGCCATCCAAACCGAGCTGGGTCAAGAAGATCCATTGACCCGCGAATTGAATGAACTGCATGATCGGATTGT TGCGGCCAATTTGCCTGCCAAAGCCCAAGCCAAAGCCTTAGAAGAACTTGGCCGCTTGGAGATGATGCCGCCAGCCGCAC CCGAATATAGCGTTATTCGGACGTATTTGGATTGGTTGCTAGAACTGCCTTGGTCAAAAACCAGCGCCGATGTTGCTGAT CTTGAAGTGGCGGCCAAGGTGCTCGAAAACAACCACTATGGCTTGAAAAAAGTCAAAGAACGGATTTTAGAATTTATCGC CGTGCGCATGCTGGCTGGTGATAGTACCAAATCGCCAATTTTATGTTTTGTTGGCCCGCCAGGTGTCGGCAAAACTAGCC TTGGCCGTTCGGTCGCCGAGGCGTTAGGCCGCGAGTTTGTGCGGCTTTCGCTTGGTGGCGTGCACGATGAGGCTGAAATT CGTGGCCATCGCCGCACCTATATTGGAGCCATGCCAGGCCGCATCATCCAAACCATGAAAGATGCAGGCACGATCAACCC AGTTTTTATGCTTGATGAGATCGATAAGCTGGGCAATGATTTCCGCGGCGATCCAGCGGCGGCCTTGCTTGAGGTGCTTG ATCCTGAGCAAAATAATACCTTTGCCGATCACTACCTTGATCTGCCGTATGATCTTTCGAAGATTATGTTTATTACCACC GCCAACATGCTTGACCCAATCGACGAGCCATTGCTTGATCGGATGGAGATTGTTGAGCTACCAGGCTATATCGAAGAAGA AAAAGTGCAAATTGCCCGTAAATTCTTGATTCCCAAGCAAATCGAAGCTAACGGTTTAAAGCAACATCCAATTACGATCA GCGATGAAGCCTTGCGCCAAATCATTCGCACCTACACCTGGGAAGCGGGCGTGCGCAACCTTGAGCGCGAAATTGGCGGT ATTTGTCGCAAAATTGCTCGCCGTGTTGCCGAGAAAAAGCGCTATCCACGCCGAATCACGCCAACCATGCTCACCGATTT CCTTGGTCAGCCGCCGTTTGACTACAGCCGCGCCAATGATCGTGATGAAATTGGGGTAGCGACAGGCATGGTTTGGTCGA GCAACGGCGGCGATGTGGTCGCAATCGAAACCGCGATTGTTGATGGCAAAGGCACAACGACCCTCACTGGCCAACTTGGC GATGTGATGCAAGAATCGGCCCAAGCAGCGCTTTCGTATGCCCGAGCTTCATCGCGCCGTTTAGGCATCGATGGCAAACG CTTCGAAAAAATCGATATTCATATTCACGTACCCGAAGGCGGTGTGCCCAAAGACGGGCCATCGGCAGGGATTACCTTAG CCTGTTCGGTGATTTCAGCCTTAACTCATCGGCCATTGCGTCGCGATGTGGCCATGACTGGCGAAATTACCCTACGCGGG CGGGTGCTGCCAATCGGCGGGTTACGTGACAAAATTTTAGGGGCATATCGCGCAGGCATCACCACCATGCTGATTCCCAA AAAGAATTTGCGTGATTTGGAAGAAGTGCCCAACAATGTGCGCCGCCAAATAACCGTGGTTGCGGTTGAACATATGGATG AGGTCTTGCCAATTGCCTTTGTCTCGAACCCGCTTGAGCGCGGTAGCCAACACACCAGCGACGGCGATCAAACCAGCGTG GTACTACCGACGATCACCCAACCGCAGCTTGGATCAGTCGAATTGTGA
Upstream 100 bases:
>100_bases AGACCGACCCGCAACCGTTCATCGCAAGAAGGCTGTGCTATAATGCCCCGTATGTTTCAACGAGCAACCCAAGCCAGAAT TGCGATAAAAGGTGTAACCC
Downstream 100 bases:
>100_bases TTTATTGCGCAAGTTGGTAAGCTCGGAAGTAAACTCACCCTCGTAAGCTAGGATTAAAGTCATCCATTCAAGTAGCACAA TCGCGTACTCTTGGCATGAT
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La 2
Number of amino acids: Translated: 815; Mature: 814
Protein sequence:
>815_residues MADDRQLVDEISAATTLELPVLPLINTVLFPTMVTPLFVARELSMAAIEAAMSADRQIVAVAQRAIEIEEHDTSQLYQVG VIAHIERVLKLPDGTTSVLVQGQQRVQIVDWLATEPYINAQVQIIEPDHESSLAIEAMMRGVLASYEKVVKLSRTMPDDA YVAALNLEDASALADLIASTLPLDIVRRQQLLELFEVEERLRRLSVVLSQEIDVLELEHHIQNQVQKEVDKSQRDFFLRE QLKAIQTELGQEDPLTRELNELHDRIVAANLPAKAQAKALEELGRLEMMPPAAPEYSVIRTYLDWLLELPWSKTSADVAD LEVAAKVLENNHYGLKKVKERILEFIAVRMLAGDSTKSPILCFVGPPGVGKTSLGRSVAEALGREFVRLSLGGVHDEAEI RGHRRTYIGAMPGRIIQTMKDAGTINPVFMLDEIDKLGNDFRGDPAAALLEVLDPEQNNTFADHYLDLPYDLSKIMFITT ANMLDPIDEPLLDRMEIVELPGYIEEEKVQIARKFLIPKQIEANGLKQHPITISDEALRQIIRTYTWEAGVRNLEREIGG ICRKIARRVAEKKRYPRRITPTMLTDFLGQPPFDYSRANDRDEIGVATGMVWSSNGGDVVAIETAIVDGKGTTTLTGQLG DVMQESAQAALSYARASSRRLGIDGKRFEKIDIHIHVPEGGVPKDGPSAGITLACSVISALTHRPLRRDVAMTGEITLRG RVLPIGGLRDKILGAYRAGITTMLIPKKNLRDLEEVPNNVRRQITVVAVEHMDEVLPIAFVSNPLERGSQHTSDGDQTSV VLPTITQPQLGSVEL
Sequences:
>Translated_815_residues MADDRQLVDEISAATTLELPVLPLINTVLFPTMVTPLFVARELSMAAIEAAMSADRQIVAVAQRAIEIEEHDTSQLYQVG VIAHIERVLKLPDGTTSVLVQGQQRVQIVDWLATEPYINAQVQIIEPDHESSLAIEAMMRGVLASYEKVVKLSRTMPDDA YVAALNLEDASALADLIASTLPLDIVRRQQLLELFEVEERLRRLSVVLSQEIDVLELEHHIQNQVQKEVDKSQRDFFLRE QLKAIQTELGQEDPLTRELNELHDRIVAANLPAKAQAKALEELGRLEMMPPAAPEYSVIRTYLDWLLELPWSKTSADVAD LEVAAKVLENNHYGLKKVKERILEFIAVRMLAGDSTKSPILCFVGPPGVGKTSLGRSVAEALGREFVRLSLGGVHDEAEI RGHRRTYIGAMPGRIIQTMKDAGTINPVFMLDEIDKLGNDFRGDPAAALLEVLDPEQNNTFADHYLDLPYDLSKIMFITT ANMLDPIDEPLLDRMEIVELPGYIEEEKVQIARKFLIPKQIEANGLKQHPITISDEALRQIIRTYTWEAGVRNLEREIGG ICRKIARRVAEKKRYPRRITPTMLTDFLGQPPFDYSRANDRDEIGVATGMVWSSNGGDVVAIETAIVDGKGTTTLTGQLG DVMQESAQAALSYARASSRRLGIDGKRFEKIDIHIHVPEGGVPKDGPSAGITLACSVISALTHRPLRRDVAMTGEITLRG RVLPIGGLRDKILGAYRAGITTMLIPKKNLRDLEEVPNNVRRQITVVAVEHMDEVLPIAFVSNPLERGSQHTSDGDQTSV VLPTITQPQLGSVEL >Mature_814_residues ADDRQLVDEISAATTLELPVLPLINTVLFPTMVTPLFVARELSMAAIEAAMSADRQIVAVAQRAIEIEEHDTSQLYQVGV IAHIERVLKLPDGTTSVLVQGQQRVQIVDWLATEPYINAQVQIIEPDHESSLAIEAMMRGVLASYEKVVKLSRTMPDDAY VAALNLEDASALADLIASTLPLDIVRRQQLLELFEVEERLRRLSVVLSQEIDVLELEHHIQNQVQKEVDKSQRDFFLREQ LKAIQTELGQEDPLTRELNELHDRIVAANLPAKAQAKALEELGRLEMMPPAAPEYSVIRTYLDWLLELPWSKTSADVADL EVAAKVLENNHYGLKKVKERILEFIAVRMLAGDSTKSPILCFVGPPGVGKTSLGRSVAEALGREFVRLSLGGVHDEAEIR GHRRTYIGAMPGRIIQTMKDAGTINPVFMLDEIDKLGNDFRGDPAAALLEVLDPEQNNTFADHYLDLPYDLSKIMFITTA NMLDPIDEPLLDRMEIVELPGYIEEEKVQIARKFLIPKQIEANGLKQHPITISDEALRQIIRTYTWEAGVRNLEREIGGI CRKIARRVAEKKRYPRRITPTMLTDFLGQPPFDYSRANDRDEIGVATGMVWSSNGGDVVAIETAIVDGKGTTTLTGQLGD VMQESAQAALSYARASSRRLGIDGKRFEKIDIHIHVPEGGVPKDGPSAGITLACSVISALTHRPLRRDVAMTGEITLRGR VLPIGGLRDKILGAYRAGITTMLIPKKNLRDLEEVPNNVRRQITVVAVEHMDEVLPIAFVSNPLERGSQHTSDGDQTSVV LPTITQPQLGSVEL
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain
Homologues:
Organism=Homo sapiens, GI31377667, Length=843, Percent_Identity=39.3831553973903, Blast_Score=553, Evalue=1e-157, Organism=Homo sapiens, GI21396489, Length=618, Percent_Identity=41.9093851132686, Blast_Score=518, Evalue=1e-146, Organism=Escherichia coli, GI1786643, Length=769, Percent_Identity=49.5448634590377, Blast_Score=766, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=653, Percent_Identity=41.6539050535988, Blast_Score=500, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17556486, Length=797, Percent_Identity=34.504391468005, Blast_Score=454, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6319449, Length=723, Percent_Identity=37.6210235131397, Blast_Score=481, Evalue=1e-136, Organism=Drosophila melanogaster, GI221513036, Length=624, Percent_Identity=43.9102564102564, Blast_Score=524, Evalue=1e-148, Organism=Drosophila melanogaster, GI24666867, Length=625, Percent_Identity=43.84, Blast_Score=523, Evalue=1e-148,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): LON2_HERA2 (A9B3R2)
Other databases:
- EMBL: CP000875 - RefSeq: YP_001545762.1 - ProteinModelPortal: A9B3R2 - GeneID: 5734868 - GenomeReviews: CP000875_GR - KEGG: hau:Haur_2996 - HOGENOM: HBG566281 - OMA: PEIHLHF - ProtClustDB: CLSK973665 - BioCyc: HAUR316274:HAUR_2996-MONOMER - GO: GO:0005737 - GO: GO:0006508 - InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 - PRINTS: PR00830 - SMART: SM00382 - SMART: SM00464 - TIGRFAMs: TIGR00763
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C; SSF88697 PUA-like; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =3.4.21.53
Molecular weight: Translated: 90407; Mature: 90276
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS01046 LON_SER
Important sites: ACT_SITE 688-688 ACT_SITE 731-731
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDRQLVDEISAATTLELPVLPLINTVLFPTMVTPLFVARELSMAAIEAAMSADRQIVA CCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VAQRAIEIEEHDTSQLYQVGVIAHIERVLKLPDGTTSVLVQGQQRVQIVDWLATEPYINA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCHHHHHHHHHHCCCCCCC QVQIIEPDHESSLAIEAMMRGVLASYEKVVKLSRTMPDDAYVAALNLEDASALADLIAST EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH LPLDIVRRQQLLELFEVEERLRRLSVVLSQEIDVLELEHHIQNQVQKEVDKSQRDFFLRE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QLKAIQTELGQEDPLTRELNELHDRIVAANLPAKAQAKALEELGRLEMMPPAAPEYSVIR HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEECCCCCCCCHHHHH TYLDWLLELPWSKTSADVADLEVAAKVLENNHYGLKKVKERILEFIAVRMLAGDSTKSPI HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE LCFVGPPGVGKTSLGRSVAEALGREFVRLSLGGVHDEAEIRGHRRTYIGAMPGRIIQTMK EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCHHHHHHHH DAGTINPVFMLDEIDKLGNDFRGDPAAALLEVLDPEQNNTFADHYLDLPYDLSKIMFITT HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHH ANMLDPIDEPLLDRMEIVELPGYIEEEKVQIARKFLIPKQIEANGLKQHPITISDEALRQ HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHH IIRTYTWEAGVRNLEREIGGICRKIARRVAEKKRYPRRITPTMLTDFLGQPPFDYSRAND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCC RDEIGVATGMVWSSNGGDVVAIETAIVDGKGTTTLTGQLGDVMQESAQAALSYARASSRR CCHHHHEECEEEECCCCCEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCC LGIDGKRFEKIDIHIHVPEGGVPKDGPSAGITLACSVISALTHRPLRRDVAMTGEITLRG CCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHEEECEEEEEE RVLPIGGLRDKILGAYRAGITTMLIPKKNLRDLEEVPNNVRRQITVVAVEHMDEVLPIAF EEEECCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH VSNPLERGSQHTSDGDQTSVVLPTITQPQLGSVEL HCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure ADDRQLVDEISAATTLELPVLPLINTVLFPTMVTPLFVARELSMAAIEAAMSADRQIVA CCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VAQRAIEIEEHDTSQLYQVGVIAHIERVLKLPDGTTSVLVQGQQRVQIVDWLATEPYINA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCHHHHHHHHHHCCCCCCC QVQIIEPDHESSLAIEAMMRGVLASYEKVVKLSRTMPDDAYVAALNLEDASALADLIAST EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH LPLDIVRRQQLLELFEVEERLRRLSVVLSQEIDVLELEHHIQNQVQKEVDKSQRDFFLRE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QLKAIQTELGQEDPLTRELNELHDRIVAANLPAKAQAKALEELGRLEMMPPAAPEYSVIR HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEECCCCCCCCHHHHH TYLDWLLELPWSKTSADVADLEVAAKVLENNHYGLKKVKERILEFIAVRMLAGDSTKSPI HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE LCFVGPPGVGKTSLGRSVAEALGREFVRLSLGGVHDEAEIRGHRRTYIGAMPGRIIQTMK EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCHHHHHHHH DAGTINPVFMLDEIDKLGNDFRGDPAAALLEVLDPEQNNTFADHYLDLPYDLSKIMFITT HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHH ANMLDPIDEPLLDRMEIVELPGYIEEEKVQIARKFLIPKQIEANGLKQHPITISDEALRQ HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHH IIRTYTWEAGVRNLEREIGGICRKIARRVAEKKRYPRRITPTMLTDFLGQPPFDYSRAND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCC RDEIGVATGMVWSSNGGDVVAIETAIVDGKGTTTLTGQLGDVMQESAQAALSYARASSRR CCHHHHEECEEEECCCCCEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCC LGIDGKRFEKIDIHIHVPEGGVPKDGPSAGITLACSVISALTHRPLRRDVAMTGEITLRG CCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHEEECEEEEEE RVLPIGGLRDKILGAYRAGITTMLIPKKNLRDLEEVPNNVRRQITVVAVEHMDEVLPIAF EEEECCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH VSNPLERGSQHTSDGDQTSVVLPTITQPQLGSVEL HCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA