Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899511
Identifier: 159899511
GI number: 159899511
Start: 3779774
End: 3780241
Strand: Direct
Name: 159899511
Synonym: Haur_2992
Alternate gene names: NA
Gene position: 3779774-3780241 (Clockwise)
Preceding gene: 159899510
Following gene: 159899515
Centisome position: 59.56
GC content: 42.09
Gene sequence:
>468_bases ATGCTTTTGTCGCTTTTTATGATTGGGATCGGCTTAATTGTATGGATCATTCTATGTTATGGTTATGCATTTTTCAAAAC AAAAATTCGCTGGTTTTTGCTGCATAGTTTGCGCTGGATCGGCATTGGTCAATATTTTGCCCTGTTGCTCTATCTGATGC TAATCGGGGTTTTACCACTACCCTATGGTGAATTAATTGTCGTTGCGACGATTGGGTTTATCATTGCGCGAAAACATGGG CCGATGTTGCGCAATACTTACACCGAGGGGCCATATCGGACACGAGATATGTTATTTTTTCGCATATATGAACCAGCCAT TGCCGCTGAACAAGGTTTTTTTGTGCCATTTCATGCCGCCGTTGATTTTGGCGCACAACGCCAATTACGCACCCAGTTGC TATTCCATGGGGCAATGATTCTGATTAATTGTCTCATTCTTTATGGTGCGTTTTTATTGGCCGATTAA
Upstream 100 bases:
>100_bases ACCCACCCCAATTCACTCTTTTTGGCTTTACTGCATGTGATTCAACAATTTTTTGATCGCTAAAACGCTTATTTTTTCAA ATGATGAGAGGAGGTTTTCA
Downstream 100 bases:
>100_bases GCTTAGGCAACGCAAAGCAGCACCTTACATATAATGGTTGATTGGAATTAACTATCACGTGGAATGCCCTCACCCCCTAG CCCCCTCCTTTCAAGGGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MLLSLFMIGIGLIVWIILCYGYAFFKTKIRWFLLHSLRWIGIGQYFALLLYLMLIGVLPLPYGELIVVATIGFIIARKHG PMLRNTYTEGPYRTRDMLFFRIYEPAIAAEQGFFVPFHAAVDFGAQRQLRTQLLFHGAMILINCLILYGAFLLAD
Sequences:
>Translated_155_residues MLLSLFMIGIGLIVWIILCYGYAFFKTKIRWFLLHSLRWIGIGQYFALLLYLMLIGVLPLPYGELIVVATIGFIIARKHG PMLRNTYTEGPYRTRDMLFFRIYEPAIAAEQGFFVPFHAAVDFGAQRQLRTQLLFHGAMILINCLILYGAFLLAD >Mature_155_residues MLLSLFMIGIGLIVWIILCYGYAFFKTKIRWFLLHSLRWIGIGQYFALLLYLMLIGVLPLPYGELIVVATIGFIIARKHG PMLRNTYTEGPYRTRDMLFFRIYEPAIAAEQGFFVPFHAAVDFGAQRQLRTQLLFHGAMILINCLILYGAFLLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17829; Mature: 17829
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSLFMIGIGLIVWIILCYGYAFFKTKIRWFLLHSLRWIGIGQYFALLLYLMLIGVLPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYGELIVVATIGFIIARKHGPMLRNTYTEGPYRTRDMLFFRIYEPAIAAEQGFFVPFHAA CCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHEEEECCCHHHHCCCCEEEHHHH VDFGAQRQLRTQLLFHGAMILINCLILYGAFLLAD HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLSLFMIGIGLIVWIILCYGYAFFKTKIRWFLLHSLRWIGIGQYFALLLYLMLIGVLPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PYGELIVVATIGFIIARKHGPMLRNTYTEGPYRTRDMLFFRIYEPAIAAEQGFFVPFHAA CCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHEEEECCCHHHHCCCCEEEHHHH VDFGAQRQLRTQLLFHGAMILINCLILYGAFLLAD HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA