Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899449
Identifier: 159899449
GI number: 159899449
Start: 3705469
End: 3706290
Strand: Direct
Name: 159899449
Synonym: Haur_2930
Alternate gene names: NA
Gene position: 3705469-3706290 (Clockwise)
Preceding gene: 159899445
Following gene: 159899450
Centisome position: 58.39
GC content: 46.23
Gene sequence:
>822_bases ATGCATATACCAATCCTTTCGCGCATCAGCACAAAAATTACCTTAGCCAGTGCGTTCTTGCTGTTTGCAACAATTTTGCT GGTGGTCATTGGGCTATTGCGTGGCTTTGCTCAAACGCGCACCGATGTAACCACCGCTAGTCAACATGGTTTGCAAAATC AAGGTCAGGTAGCCTTGTTTGATCTCACGCAAGTTGAGGCCAAATTGCTCAATGCCAACCTTGAGCAAGCCGCCAGCACG ACTCGCCATCTAGTTAGTTTGTTTAATAGCCTTGATCAAGTTCCGAGCCTGAGCTTGGATGACCCATTGAGCCAACTCAC AACTGGCCCTGCCAACAATCGTTTTGATGCTAACCCCGACCGCAAGAGCGATTTAGTGATTTTTGCCAATACGCCTGATA GCGCGTTACTGCGTCAAAACCTACGCGATTCGCAGATTCTCGATGCGATTTTCCCTGGGGTTTTGGCCAATTTGGGCGAT GCGCTAGCAATTTATTATGTTAGCAACGAAGGCATGACCCGCTATTATCCGGTTTCGAATTTGCAAGATATTGTGCCGTC TGATTTCGATGTGCCCAACGAAAATTTTTATACGATTGTGGCGGCAACCCGCAACCCTGAACGCAAAACCGTTTGGACAG ATATTTACTCGGATGAATTGGGCAAAGGCTTACTAACAACCGTCAGTTCGCCAATTTACCAAGGCGATCAATTTCGTGGC TTTATTGGTATCGATATTACACTCAATGAATTTTTGAAACAACTTGATACGATTCCACGCCCAGTAGCTATGCTTTTGTG CTTGATCAACAGGGCGATGTGA
Upstream 100 bases:
>100_bases TTGGCTATTGACAGCAGCCATTAGCTCTACGATGATATGGAAATCCCCAAACTTGTTTCCATGGCGATTTGTTGGCGTTG TTTTAAGGGAATGTGTGATT
Downstream 100 bases:
>100_bases TTGCTGCGCCCCAAATTGCGCTCCAAACATTTTTGAATATTCCTAGCTCGCAAACCCTTAGCCCAAGCCAAACCCTCGAA CTTCAGATGAACCCCACCAC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Cache Sensor Hybrid Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Hybrid Sensory Histidine Protein Kinase; Cache Sensor Signal Transduction Histidine Kinase; Sensory Box Histidine Kinase/Response Regulator; Periplasmic Sensory Histidine Protein Kinase; Signal Transduction Histidine Kinase; Cache Sensor Protein
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MHIPILSRISTKITLASAFLLFATILLVVIGLLRGFAQTRTDVTTASQHGLQNQGQVALFDLTQVEAKLLNANLEQAAST TRHLVSLFNSLDQVPSLSLDDPLSQLTTGPANNRFDANPDRKSDLVIFANTPDSALLRQNLRDSQILDAIFPGVLANLGD ALAIYYVSNEGMTRYYPVSNLQDIVPSDFDVPNENFYTIVAATRNPERKTVWTDIYSDELGKGLLTTVSSPIYQGDQFRG FIGIDITLNEFLKQLDTIPRPVAMLLCLINRAM
Sequences:
>Translated_273_residues MHIPILSRISTKITLASAFLLFATILLVVIGLLRGFAQTRTDVTTASQHGLQNQGQVALFDLTQVEAKLLNANLEQAAST TRHLVSLFNSLDQVPSLSLDDPLSQLTTGPANNRFDANPDRKSDLVIFANTPDSALLRQNLRDSQILDAIFPGVLANLGD ALAIYYVSNEGMTRYYPVSNLQDIVPSDFDVPNENFYTIVAATRNPERKTVWTDIYSDELGKGLLTTVSSPIYQGDQFRG FIGIDITLNEFLKQLDTIPRPVAMLLCLINRAM >Mature_273_residues MHIPILSRISTKITLASAFLLFATILLVVIGLLRGFAQTRTDVTTASQHGLQNQGQVALFDLTQVEAKLLNANLEQAAST TRHLVSLFNSLDQVPSLSLDDPLSQLTTGPANNRFDANPDRKSDLVIFANTPDSALLRQNLRDSQILDAIFPGVLANLGD ALAIYYVSNEGMTRYYPVSNLQDIVPSDFDVPNENFYTIVAATRNPERKTVWTDIYSDELGKGLLTTVSSPIYQGDQFRG FIGIDITLNEFLKQLDTIPRPVAMLLCLINRAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30115; Mature: 30115
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIPILSRISTKITLASAFLLFATILLVVIGLLRGFAQTRTDVTTASQHGLQNQGQVALF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE DLTQVEAKLLNANLEQAASTTRHLVSLFNSLDQVPSLSLDDPLSQLTTGPANNRFDANPD EHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCC RKSDLVIFANTPDSALLRQNLRDSQILDAIFPGVLANLGDALAIYYVSNEGMTRYYPVSN CCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCC LQDIVPSDFDVPNENFYTIVAATRNPERKTVWTDIYSDELGKGLLTTVSSPIYQGDQFRG HHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHCCHHHHHHCCCCCCCCCCCE FIGIDITLNEFLKQLDTIPRPVAMLLCLINRAM EEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MHIPILSRISTKITLASAFLLFATILLVVIGLLRGFAQTRTDVTTASQHGLQNQGQVALF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE DLTQVEAKLLNANLEQAASTTRHLVSLFNSLDQVPSLSLDDPLSQLTTGPANNRFDANPD EHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCC RKSDLVIFANTPDSALLRQNLRDSQILDAIFPGVLANLGDALAIYYVSNEGMTRYYPVSN CCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCC LQDIVPSDFDVPNENFYTIVAATRNPERKTVWTDIYSDELGKGLLTTVSSPIYQGDQFRG HHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHCCHHHHHHCCCCCCCCCCCE FIGIDITLNEFLKQLDTIPRPVAMLLCLINRAM EEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA