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The map label for this gene is cbiX [H]

Identifier: 159899442

GI number: 159899442

Start: 3695732

End: 3696433

Strand: Direct

Name: cbiX [H]

Synonym: Haur_2923

Alternate gene names: 159899442

Gene position: 3695732-3696433 (Clockwise)

Preceding gene: 159899441

Following gene: 159899443

Centisome position: 58.23

GC content: 51.57

Gene sequence:

>702_bases
ATGCTGCGTTTGGCTGCACGGCTGCGCGAGCGCGGCGTTGCCCAATTGGCTGGGGCGGGTTTTCTCAATTATAGCCAGCC
TGATCTGACCCAAGCAACCGCCCGTTTAGTCGCGCAAGGCGCAACTGCAATTAGGGTCTTGCCCTATTTTTTGATCGATG
GCTATTTTGTCCAAGTGAGTTTACGCCAACAGGTTGCGCAAATGGCCGCCAATTATCCTAATGTAGCTTTTTCGATGGCC
CCAGCGTTTGGCGAACACCCCGCCTTGGCCCAACTCGTGCAAAAACGCGCTAATCAGGCTTGGCCTGATTTAGATTATGC
GCAAGCTGGCTTGTTGGTAATGGTGCATGGCAGTCCACGCCCAGCCTCAAATGCACCGATTGAAGCCGTTGCTGAACGGG
TACGCCAAGCAACACCTTGGGCCGCAGTCCAGGTCTGTTTTATGGATTTGAACGAGCCAAGCATCGCGGAAGCCCTTGAT
AGGCTGGTTGCCCAAGGTTTGAAGCAGCTTGTGGCCGTGCCCTATTTTATTCAATTTGGCAGTCATGTGCGTGAAGATTT
GCCCGAAATTATTCAAGCAGGCCGTGATCGTCATGCTCATACCACAATTGTGTTGGCAAAACATCTCGATTATGACGAAT
TATTGATCGATGTACTAACCGATCGGGTTGCCGAACACCGACCTGTTATCACTAATGGATGA

Upstream 100 bases:

>100_bases
TAATATGGTCGATTATTTGCAAAAGAAGTAGTGGAATCAACCAATGCAAGCACTATTGATCATTGGTCATGGGAGTTTAT
TCGCTGGTTCGGGGGCAACC

Downstream 100 bases:

>100_bases
GGCAATAGATGAGTCGTTTTCCAAATAGCCAAGTGCATCGCTGGGATTTAACGCCCGAGCAAGCGATCGATCTGCAACTC
CAACTACGCGATCAGGTGCG

Product: cobalamin (vitamin B12) biosynthesis protein CbiX

Products: NA

Alternate protein names: CbiXL [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MLRLAARLRERGVAQLAGAGFLNYSQPDLTQATARLVAQGATAIRVLPYFLIDGYFVQVSLRQQVAQMAANYPNVAFSMA
PAFGEHPALAQLVQKRANQAWPDLDYAQAGLLVMVHGSPRPASNAPIEAVAERVRQATPWAAVQVCFMDLNEPSIAEALD
RLVAQGLKQLVAVPYFIQFGSHVREDLPEIIQAGRDRHAHTTIVLAKHLDYDELLIDVLTDRVAEHRPVITNG

Sequences:

>Translated_233_residues
MLRLAARLRERGVAQLAGAGFLNYSQPDLTQATARLVAQGATAIRVLPYFLIDGYFVQVSLRQQVAQMAANYPNVAFSMA
PAFGEHPALAQLVQKRANQAWPDLDYAQAGLLVMVHGSPRPASNAPIEAVAERVRQATPWAAVQVCFMDLNEPSIAEALD
RLVAQGLKQLVAVPYFIQFGSHVREDLPEIIQAGRDRHAHTTIVLAKHLDYDELLIDVLTDRVAEHRPVITNG
>Mature_233_residues
MLRLAARLRERGVAQLAGAGFLNYSQPDLTQATARLVAQGATAIRVLPYFLIDGYFVQVSLRQQVAQMAANYPNVAFSMA
PAFGEHPALAQLVQKRANQAWPDLDYAQAGLLVMVHGSPRPASNAPIEAVAERVRQATPWAAVQVCFMDLNEPSIAEALD
RLVAQGLKQLVAVPYFIQFGSHVREDLPEIIQAGRDRHAHTTIVLAKHLDYDELLIDVLTDRVAEHRPVITNG

Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. CbiXL subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.3 [H]

Molecular weight: Translated: 25594; Mature: 25594

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLAARLRERGVAQLAGAGFLNYSQPDLTQATARLVAQGATAIRVLPYFLIDGYFVQVS
CCHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHEEHH
LRQQVAQMAANYPNVAFSMAPAFGEHPALAQLVQKRANQAWPDLDYAQAGLLVMVHGSPR
HHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCEEEEEECCCC
PASNAPIEAVAERVRQATPWAAVQVCFMDLNEPSIAEALDRLVAQGLKQLVAVPYFIQFG
CCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHVREDLPEIIQAGRDRHAHTTIVLAKHLDYDELLIDVLTDRVAEHRPVITNG
HHHHHHHHHHHHCCCCCCCHHHEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLRLAARLRERGVAQLAGAGFLNYSQPDLTQATARLVAQGATAIRVLPYFLIDGYFVQVS
CCHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHEEHH
LRQQVAQMAANYPNVAFSMAPAFGEHPALAQLVQKRANQAWPDLDYAQAGLLVMVHGSPR
HHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCEEEEEECCCC
PASNAPIEAVAERVRQATPWAAVQVCFMDLNEPSIAEALDRLVAQGLKQLVAVPYFIQFG
CCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHVREDLPEIIQAGRDRHAHTTIVLAKHLDYDELLIDVLTDRVAEHRPVITNG
HHHHHHHHHHHHCCCCCCCHHHEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9742225; 12917443 [H]