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The map label for this gene is ydfG [C]

Identifier: 159899417

GI number: 159899417

Start: 3667649

End: 3668413

Strand: Direct

Name: ydfG [C]

Synonym: Haur_2898

Alternate gene names: 159899417

Gene position: 3667649-3668413 (Clockwise)

Preceding gene: 159899416

Following gene: 159899418

Centisome position: 57.79

GC content: 47.32

Gene sequence:

>765_bases
ATGAATGTTGTGGTAACTGGGGGAACCAGTGGAATTGGCGCGGCAGTTGTGCGCGAATTAACCAACAAAGGCCTACAAGT
AAGCTTTATTGGGCGTAATCGTGAGCGTGGGCAAGCAATCGCCAAGCAAACAGGTGGGCAATTTATTCAGGCCGATTTAT
CGTTGCTCCACGAGACGCACCAGCTTGCTACATACCTAAACAAACCACTCGATAGCCTCATTCTATGTGCTGGTGGGATC
GGCTCAAAAAGCACACCCTTAGTTACTAGTGAAGGCTTAGAGACATTGTTCGCCACTAACTATTTAAGCAAAGTCGTCTT
ATCGCAAGCTTTACTGCCCCAAATGACTACCAACGCCAGTATTGTGATGGTAAGCGGCAATGGACGTTACAAAAATGCTT
CAACTGCTTGGCAAACTGCCGAAAAAGGGCTGCGAGGAGCATTAAAAGCTGGTTTAGCGCTCGATTTATATGCCCAGCAG
CTTGCTCAAAACCAACCAGCACTGCGGGTTCATACCTGTTACCCTGGCATGGTTCAGACAAATTTATTTCAGCAGATGGC
TTGGCCAGTACGAGTGTTGGTGCGCATGTTTGGCCAATCGCCAGACCAAGCTAGTGGCTATATCACACGCTTGGTCTACA
GCCGCCATGAAGGTGTGCATTGGCAAAAAACCAAACCTATACAGCTTGACTTGCCAGTAACCGGCAATGATTTAGCTCTT
GAGCTATGGAACTATAGTCACAGCATTCTGGCTGATTATCAATAA

Upstream 100 bases:

>100_bases
TGGCTCCAGCGAATTGCCAAAAATTTAGGCTATCACGAATCAGATTAATTTTTTGACATATATTTAGCATCCTAATTATT
TTTATCAAAGGAAGCATTGT

Downstream 100 bases:

>100_bases
CGCAGGAGTTTTACGATGAATTATAAGGTTGGTTGGCTGTTCGATCAGCAAATTTTGGCCCTTACCCATTTTACTCCGGC
CATAACTCCTGAGGAGTTTC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: Dehydrogenase Family Protein; Short-Chain Dehydrogenase; Oxidoreductase

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNVVVTGGTSGIGAAVVRELTNKGLQVSFIGRNRERGQAIAKQTGGQFIQADLSLLHETHQLATYLNKPLDSLILCAGGI
GSKSTPLVTSEGLETLFATNYLSKVVLSQALLPQMTTNASIVMVSGNGRYKNASTAWQTAEKGLRGALKAGLALDLYAQQ
LAQNQPALRVHTCYPGMVQTNLFQQMAWPVRVLVRMFGQSPDQASGYITRLVYSRHEGVHWQKTKPIQLDLPVTGNDLAL
ELWNYSHSILADYQ

Sequences:

>Translated_254_residues
MNVVVTGGTSGIGAAVVRELTNKGLQVSFIGRNRERGQAIAKQTGGQFIQADLSLLHETHQLATYLNKPLDSLILCAGGI
GSKSTPLVTSEGLETLFATNYLSKVVLSQALLPQMTTNASIVMVSGNGRYKNASTAWQTAEKGLRGALKAGLALDLYAQQ
LAQNQPALRVHTCYPGMVQTNLFQQMAWPVRVLVRMFGQSPDQASGYITRLVYSRHEGVHWQKTKPIQLDLPVTGNDLAL
ELWNYSHSILADYQ
>Mature_254_residues
MNVVVTGGTSGIGAAVVRELTNKGLQVSFIGRNRERGQAIAKQTGGQFIQADLSLLHETHQLATYLNKPLDSLILCAGGI
GSKSTPLVTSEGLETLFATNYLSKVVLSQALLPQMTTNASIVMVSGNGRYKNASTAWQTAEKGLRGALKAGLALDLYAQQ
LAQNQPALRVHTCYPGMVQTNLFQQMAWPVRVLVRMFGQSPDQASGYITRLVYSRHEGVHWQKTKPIQLDLPVTGNDLAL
ELWNYSHSILADYQ

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17532791, Length=136, Percent_Identity=36.7647058823529, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27654; Mature: 27654

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVVTGGTSGIGAAVVRELTNKGLQVSFIGRNRERGQAIAKQTGGQFIQADLSLLHETH
CEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
QLATYLNKPLDSLILCAGGIGSKSTPLVTSEGLETLFATNYLSKVVLSQALLPQMTTNAS
HHHHHHHCCHHHHHEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
IVMVSGNGRYKNASTAWQTAEKGLRGALKAGLALDLYAQQLAQNQPALRVHTCYPGMVQT
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCCCHHHH
NLFQQMAWPVRVLVRMFGQSPDQASGYITRLVYSRHEGVHWQKTKPIQLDLPVTGNDLAL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEE
ELWNYSHSILADYQ
EEECCCCCEEECCC
>Mature Secondary Structure
MNVVVTGGTSGIGAAVVRELTNKGLQVSFIGRNRERGQAIAKQTGGQFIQADLSLLHETH
CEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
QLATYLNKPLDSLILCAGGIGSKSTPLVTSEGLETLFATNYLSKVVLSQALLPQMTTNAS
HHHHHHHCCHHHHHEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
IVMVSGNGRYKNASTAWQTAEKGLRGALKAGLALDLYAQQLAQNQPALRVHTCYPGMVQT
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCCCHHHH
NLFQQMAWPVRVLVRMFGQSPDQASGYITRLVYSRHEGVHWQKTKPIQLDLPVTGNDLAL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEE
ELWNYSHSILADYQ
EEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA