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The map label for this gene is slyA [C]

Identifier: 159899416

GI number: 159899416

Start: 3667171

End: 3667596

Strand: Direct

Name: slyA [C]

Synonym: Haur_2897

Alternate gene names: 159899416

Gene position: 3667171-3667596 (Clockwise)

Preceding gene: 159899413

Following gene: 159899417

Centisome position: 57.78

GC content: 46.01

Gene sequence:

>426_bases
ATGTCAAAGCCAATTCGCTACTTAAAACTAAGCTACATTCTGATGCGCAAAGGCCTAGATGAAGAACTAAGTGCCTATCA
GCTTACCACCTCGCAATTTGAGATTATGGGCTATCTTTATGGTGAGGCGGAGATTGAGCAACAGCAACTTCAATCCTACA
GTGGGGTTACGCCTGCAACCTTGACTGGCATTCTGGATAAATTGGAGCAACGTGATTTGGTACAGCGGCGCTTGAGCCAT
GTCGATGGTCGCGCTAAAACGGTTGCTTTAACACCCACAGGTCAAGCCCTTTGCGGCCAATTGATCGATCTATTTCATGA
GTTTGAAGCCAAAATGCTTGAAGGCTTTTCAGCCGCCGAACGCGCTTTATTCACCGATTGGCTCCAGCGAATTGCCAAAA
ATTTAGGCTATCACGAATCAGATTAA

Upstream 100 bases:

>100_bases
AATAGTTGCATGAGAAATTGCTGATACCTAGCTTATTAATCATTGCTTGACGAACATAAGTAATTATCCTATACTTAGGA
TGCTAAATATTGAGGAAGCC

Downstream 100 bases:

>100_bases
TTTTTTGACATATATTTAGCATCCTAATTATTTTTATCAAAGGAAGCATTGTATGAATGTTGTGGTAACTGGGGGAACCA
GTGGAATTGGCGCGGCAGTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator MarR Family

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSKPIRYLKLSYILMRKGLDEELSAYQLTTSQFEIMGYLYGEAEIEQQQLQSYSGVTPATLTGILDKLEQRDLVQRRLSH
VDGRAKTVALTPTGQALCGQLIDLFHEFEAKMLEGFSAAERALFTDWLQRIAKNLGYHESD

Sequences:

>Translated_141_residues
MSKPIRYLKLSYILMRKGLDEELSAYQLTTSQFEIMGYLYGEAEIEQQQLQSYSGVTPATLTGILDKLEQRDLVQRRLSH
VDGRAKTVALTPTGQALCGQLIDLFHEFEAKMLEGFSAAERALFTDWLQRIAKNLGYHESD
>Mature_140_residues
SKPIRYLKLSYILMRKGLDEELSAYQLTTSQFEIMGYLYGEAEIEQQQLQSYSGVTPATLTGILDKLEQRDLVQRRLSHV
DGRAKTVALTPTGQALCGQLIDLFHEFEAKMLEGFSAAERALFTDWLQRIAKNLGYHESD

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16050; Mature: 15918

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPIRYLKLSYILMRKGLDEELSAYQLTTSQFEIMGYLYGEAEIEQQQLQSYSGVTPAT
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHH
LTGILDKLEQRDLVQRRLSHVDGRAKTVALTPTGQALCGQLIDLFHEFEAKMLEGFSAAE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RALFTDWLQRIAKNLGYHESD
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKPIRYLKLSYILMRKGLDEELSAYQLTTSQFEIMGYLYGEAEIEQQQLQSYSGVTPAT
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHH
LTGILDKLEQRDLVQRRLSHVDGRAKTVALTPTGQALCGQLIDLFHEFEAKMLEGFSAAE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RALFTDWLQRIAKNLGYHESD
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA