Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is crp [C]

Identifier: 159899403

GI number: 159899403

Start: 3656420

End: 3657076

Strand: Direct

Name: crp [C]

Synonym: Haur_2884

Alternate gene names: 159899403

Gene position: 3656420-3657076 (Clockwise)

Preceding gene: 159899400

Following gene: 159899407

Centisome position: 57.61

GC content: 54.34

Gene sequence:

>657_bases
ATGAGTGTTGACGTTGAAGTTTTGCGGCAATTTACCCGTTTTGCTGCACTCGATCCATTAGCTTTGCGCGATCTTGCCCG
GGCGATGGAAGTTCGTTCATTTCGGCCAGGCCAATATTTGGTGCTGGAAGATGATCCGCGGTTTGGCTTATTTGGCATTT
TAGAGGGGCGGGTGCGGCTTTCACGTACCGCCAGCGATGGCCGTGAGCAGGTGCTCTCAATTGCTGAAACTGGCGAGCTG
TTTAATATCGAGCCATTTGTTGATGCTGGGCCAGCTCCGGCAACCGCCCGCGCCATGGCTCCAACCCGCTGTGTGCATTT
GCCAACCGCCGCCTTGCCCGATGTGTTACGCAGCCATCCTGAATTTACCTTGATTTTGCTGCGCGATTTGGCGGCTCAAG
CGCGTGATTTGGCGGTGTTGCTGGAAGATTTGGCGTTTCGCACGGTGCGAGCACGTTTGGCACGAATTTTATTGCACGAG
GCGGCTGATGGAACCGCTGCCTTAACCCATCAAGAATTGGCAGCTCGTGCAGGCACGGTGCGCGAAATTATTGGCCGAAC
CTTGCGCCAAATGTCCGATGAGGGCTTGGTGGAGTTGGCTCGTGGCCATGTGTTAGTCTTAGATATGCAGGGTTTGGCAG
CGCTGATCGAAAATTAA

Upstream 100 bases:

>100_bases
ATAGGGAAGTATACATATTCTTTTCCAACAGAATCTAGCCCCTCATCCCTAGCCCCTGGCCCCTTCAAGTAACAATTTCG
CGCATGAGGCGCTGTTTGAT

Downstream 100 bases:

>100_bases
GCTAATTCAATATATTCATACACATCATTCAGCTTGAGTTGCGCATTAATCGCCTCAAGTTGAATTGTTTGTTCTAGTGA
CCAAAATTCGATCAATAACC

Product: Crp/FNR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator Crp/Fnr Family; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein; Crp/Fnr Family Transcriptional Regulator

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSVDVEVLRQFTRFAALDPLALRDLARAMEVRSFRPGQYLVLEDDPRFGLFGILEGRVRLSRTASDGREQVLSIAETGEL
FNIEPFVDAGPAPATARAMAPTRCVHLPTAALPDVLRSHPEFTLILLRDLAAQARDLAVLLEDLAFRTVRARLARILLHE
AADGTAALTHQELAARAGTVREIIGRTLRQMSDEGLVELARGHVLVLDMQGLAALIEN

Sequences:

>Translated_218_residues
MSVDVEVLRQFTRFAALDPLALRDLARAMEVRSFRPGQYLVLEDDPRFGLFGILEGRVRLSRTASDGREQVLSIAETGEL
FNIEPFVDAGPAPATARAMAPTRCVHLPTAALPDVLRSHPEFTLILLRDLAAQARDLAVLLEDLAFRTVRARLARILLHE
AADGTAALTHQELAARAGTVREIIGRTLRQMSDEGLVELARGHVLVLDMQGLAALIEN
>Mature_217_residues
SVDVEVLRQFTRFAALDPLALRDLARAMEVRSFRPGQYLVLEDDPRFGLFGILEGRVRLSRTASDGREQVLSIAETGELF
NIEPFVDAGPAPATARAMAPTRCVHLPTAALPDVLRSHPEFTLILLRDLAAQARDLAVLLEDLAFRTVRARLARILLHEA
ADGTAALTHQELAARAGTVREIIGRTLRQMSDEGLVELARGHVLVLDMQGLAALIEN

Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23920; Mature: 23789

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDVEVLRQFTRFAALDPLALRDLARAMEVRSFRPGQYLVLEDDPRFGLFGILEGRVRL
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHEECCCHHH
SRTASDGREQVLSIAETGELFNIEPFVDAGPAPATARAMAPTRCVHLPTAALPDVLRSHP
HHCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCHHHEECCHHHHHHHHHCCC
EFTLILLRDLAAQARDLAVLLEDLAFRTVRARLARILLHEAADGTAALTHQELAARAGTV
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
REIIGRTLRQMSDEGLVELARGHVLVLDMQGLAALIEN
HHHHHHHHHHHCCCHHHHHHCCCEEEEEHHHHHHHHCC
>Mature Secondary Structure 
SVDVEVLRQFTRFAALDPLALRDLARAMEVRSFRPGQYLVLEDDPRFGLFGILEGRVRL
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHEECCCHHH
SRTASDGREQVLSIAETGELFNIEPFVDAGPAPATARAMAPTRCVHLPTAALPDVLRSHP
HHCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCHHHEECCHHHHHHHHHCCC
EFTLILLRDLAAQARDLAVLLEDLAFRTVRARLARILLHEAADGTAALTHQELAARAGTV
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
REIIGRTLRQMSDEGLVELARGHVLVLDMQGLAALIEN
HHHHHHHHHHHCCCHHHHHHCCCEEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA