Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899397

Identifier: 159899397

GI number: 159899397

Start: 3650418

End: 3651302

Strand: Direct

Name: 159899397

Synonym: Haur_2878

Alternate gene names: NA

Gene position: 3650418-3651302 (Clockwise)

Preceding gene: 159899396

Following gene: 159899398

Centisome position: 57.52

GC content: 51.07

Gene sequence:

>885_bases
ATGAGCGTGATTCTCGATAAACATACAGCAGTTGAACGTCAACCCAACCCACGCCGTGGTAAAGGGCCAAGTGCTTTTAC
AATCTTTTGGCGCTCAGTCATTGGGCGGGCTTATCCACGGATTATCGGCACGCAACGCGAACTAAGTTGGTTGTTTTTCG
ATATCTTTTTGCCATTTATGGCCACCATGTCGTATGTGTTGGTCTATGAGGCGATTGGTGCGCCAGCTTCCTACAAGGGC
TTAGTGTTGGTCGGCGGAGCCATGACCGCCTTTTGGCTGAATGTGCTTTGGTCGATGGCGATGCAGTTGTATTGGGATAA
AGAGCAAGGCAATTTGCAACTATATATGCTAGCCCCAACCTCGCGCATGGCAATTTTGACGGGCATGGCCTTGGGTGGGT
TGTTTGCAACGACGATTCGTGCCGCAATTATTTTGATTGGTGGCTCGTTGATCTTTGGCATTCGCTATCAAGCCACCAAT
TGGTTTGCCTTGGTCGGCATTTTCTTCTTGTCGCTAATTGCCTTGTATGGCATGGGCATGCTGCTCAGCTCCATTTTCTT
GGTTTATGGGCGCGGCGCTTGGCAGATGACCGCCGCCTTGCAAGAGCCAGTTTTCTTTGTTTCCGGCTTTCACTTTCCAG
TTAAAGCGCTGGGCACGGTCGTCGCAACTGGAGCTTCGGTTGTACCGTTGACCTTGGGTCTTGATGCAATGCGCCAATTG
CTGTTTCCTGAAATGATGCAGCAATTTCAATTTTTGAGCGTTGGCACTGAAGCAGCAATTTTAGCAGGCCTAGCCTTGGG
CTTTGGCCTTGTCGCACGCTGGGCCTTGCTGCGCATGGAGCGCAAATCACGCCAAGATGGCCGCCTGACCGAGCGAGGCA
ATTAA

Upstream 100 bases:

>100_bases
ATAATGCCGGTTTGTTGTCGCTCGAAAAACGCCAACCAACCCTTGAAGACGTGTTTGTCAACCTCGTTGGCCACTCATTA
TCAGAAAGTGAGGCCAGTGC

Downstream 100 bases:

>100_bases
AGTCAAAAGTCAAAGGGCAAAAGGCAGAAATAAAAATAAAACCCAAAAAGAAATTTCCAGAATTAACATTAATTCTAGGG
TTTGCTCATAAGGGATTTTG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSVILDKHTAVERQPNPRRGKGPSAFTIFWRSVIGRAYPRIIGTQRELSWLFFDIFLPFMATMSYVLVYEAIGAPASYKG
LVLVGGAMTAFWLNVLWSMAMQLYWDKEQGNLQLYMLAPTSRMAILTGMALGGLFATTIRAAIILIGGSLIFGIRYQATN
WFALVGIFFLSLIALYGMGMLLSSIFLVYGRGAWQMTAALQEPVFFVSGFHFPVKALGTVVATGASVVPLTLGLDAMRQL
LFPEMMQQFQFLSVGTEAAILAGLALGFGLVARWALLRMERKSRQDGRLTERGN

Sequences:

>Translated_294_residues
MSVILDKHTAVERQPNPRRGKGPSAFTIFWRSVIGRAYPRIIGTQRELSWLFFDIFLPFMATMSYVLVYEAIGAPASYKG
LVLVGGAMTAFWLNVLWSMAMQLYWDKEQGNLQLYMLAPTSRMAILTGMALGGLFATTIRAAIILIGGSLIFGIRYQATN
WFALVGIFFLSLIALYGMGMLLSSIFLVYGRGAWQMTAALQEPVFFVSGFHFPVKALGTVVATGASVVPLTLGLDAMRQL
LFPEMMQQFQFLSVGTEAAILAGLALGFGLVARWALLRMERKSRQDGRLTERGN
>Mature_293_residues
SVILDKHTAVERQPNPRRGKGPSAFTIFWRSVIGRAYPRIIGTQRELSWLFFDIFLPFMATMSYVLVYEAIGAPASYKGL
VLVGGAMTAFWLNVLWSMAMQLYWDKEQGNLQLYMLAPTSRMAILTGMALGGLFATTIRAAIILIGGSLIFGIRYQATNW
FALVGIFFLSLIALYGMGMLLSSIFLVYGRGAWQMTAALQEPVFFVSGFHFPVKALGTVVATGASVVPLTLGLDAMRQLL
FPEMMQQFQFLSVGTEAAILAGLALGFGLVARWALLRMERKSRQDGRLTERGN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32507; Mature: 32376

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVILDKHTAVERQPNPRRGKGPSAFTIFWRSVIGRAYPRIIGTQRELSWLFFDIFLPFM
CCEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ATMSYVLVYEAIGAPASYKGLVLVGGAMTAFWLNVLWSMAMQLYWDKEQGNLQLYMLAPT
HHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCC
SRMAILTGMALGGLFATTIRAAIILIGGSLIFGIRYQATNWFALVGIFFLSLIALYGMGM
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LLSSIFLVYGRGAWQMTAALQEPVFFVSGFHFPVKALGTVVATGASVVPLTLGLDAMRQL
HHHHHHHHHCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCHHHHHHCHHHHHHH
LFPEMMQQFQFLSVGTEAAILAGLALGFGLVARWALLRMERKSRQDGRLTERGN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SVILDKHTAVERQPNPRRGKGPSAFTIFWRSVIGRAYPRIIGTQRELSWLFFDIFLPFM
CEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ATMSYVLVYEAIGAPASYKGLVLVGGAMTAFWLNVLWSMAMQLYWDKEQGNLQLYMLAPT
HHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCC
SRMAILTGMALGGLFATTIRAAIILIGGSLIFGIRYQATNWFALVGIFFLSLIALYGMGM
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LLSSIFLVYGRGAWQMTAALQEPVFFVSGFHFPVKALGTVVATGASVVPLTLGLDAMRQL
HHHHHHHHHCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCHHHHHHCHHHHHHH
LFPEMMQQFQFLSVGTEAAILAGLALGFGLVARWALLRMERKSRQDGRLTERGN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA