Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899373

Identifier: 159899373

GI number: 159899373

Start: 3622135

End: 3622515

Strand: Direct

Name: 159899373

Synonym: Haur_2854

Alternate gene names: NA

Gene position: 3622135-3622515 (Clockwise)

Preceding gene: 159899372

Following gene: 159899376

Centisome position: 57.07

GC content: 49.87

Gene sequence:

>381_bases
ATGCGGAATGTTGTCCAATGGTTTGTTTTTGCTAGCCTATTAATCGTATTAGGAGCATGTGCTATGAACAGCACCCCGAC
ACCAATTGTTAACCCCGCCCCAATCGAATATCCCCAAACCAAGCCCGATAGCTTAATCTTGGCCTATGGCGTGCCACACG
TCCAATTTGCCCAGCATTGGGTTCGGATCGCAAGCTATGATCGAGTGAGCGAATCAATGCTGGTGGAAATTCGCCCTCAT
CGCGATACAACCGGAGTCGAACAGTCGCTCAAAGTTGGCGATAGCTTAACAATTGGGAATCAGCACTATCGTGTTTTGGC
CTTACAAGCGCCTCAGTCAGGCCTGGGCTGGCTCGAAATCGATTCACAGCCACAGCCATAA

Upstream 100 bases:

>100_bases
CCTTATATAACCCTTGGGGTTATGATCACCCAACAATTACCTTTGATGAATTTAAAGCCAATTATGAAACCGTATCAATT
AATGAAAAGGATTAAGGGTT

Downstream 100 bases:

>100_bases
TTGATCCACGAAGGGCATGAAGGACACGAAGCTAAGGATTCCAAACCTAATCAGCTTCGTGGGTCTTCGTGTCCTTCGTG
GATCAAAACGGCCCCTAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MRNVVQWFVFASLLIVLGACAMNSTPTPIVNPAPIEYPQTKPDSLILAYGVPHVQFAQHWVRIASYDRVSESMLVEIRPH
RDTTGVEQSLKVGDSLTIGNQHYRVLALQAPQSGLGWLEIDSQPQP

Sequences:

>Translated_126_residues
MRNVVQWFVFASLLIVLGACAMNSTPTPIVNPAPIEYPQTKPDSLILAYGVPHVQFAQHWVRIASYDRVSESMLVEIRPH
RDTTGVEQSLKVGDSLTIGNQHYRVLALQAPQSGLGWLEIDSQPQP
>Mature_126_residues
MRNVVQWFVFASLLIVLGACAMNSTPTPIVNPAPIEYPQTKPDSLILAYGVPHVQFAQHWVRIASYDRVSESMLVEIRPH
RDTTGVEQSLKVGDSLTIGNQHYRVLALQAPQSGLGWLEIDSQPQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14005; Mature: 14005

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVVQWFVFASLLIVLGACAMNSTPTPIVNPAPIEYPQTKPDSLILAYGVPHVQFAQHW
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH
VRIASYDRVSESMLVEIRPHRDTTGVEQSLKVGDSLTIGNQHYRVLALQAPQSGLGWLEI
HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHCCCEEEECCCCEEEEEEECCCCCCCEEEE
DSQPQP
CCCCCC
>Mature Secondary Structure
MRNVVQWFVFASLLIVLGACAMNSTPTPIVNPAPIEYPQTKPDSLILAYGVPHVQFAQHW
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH
VRIASYDRVSESMLVEIRPHRDTTGVEQSLKVGDSLTIGNQHYRVLALQAPQSGLGWLEI
HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHCCCEEEECCCCEEEEEEECCCCCCCEEEE
DSQPQP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA