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The map label for this gene is ybjT [H]

Identifier: 159899223

GI number: 159899223

Start: 3457571

End: 3458497

Strand: Direct

Name: ybjT [H]

Synonym: Haur_2704

Alternate gene names: 159899223

Gene position: 3457571-3458497 (Clockwise)

Preceding gene: 159899222

Following gene: 159899226

Centisome position: 54.48

GC content: 49.08

Gene sequence:

>927_bases
ATGATTTTAGTAACTGGTGGCACAGGCTATGTTGGTTCACGTTTGATTGAAAAATTACGCCAACGCCCTGAGCCAGTGCG
AGTGTTGGTTCGCACCCCAGAAAAAGCTCAAAAGCTGGTTGCTGGCAACGTTTCAATTGTCAAAGGCGATGTGACCGATC
CTGAGTCGTTAATCGCGGCGATGAAAGGGGTCAGCACGGTTATTCATTTGGTGGCGATTATTCGCGAACGTTCGGGCGGA
ATCAGCTTCGAACGGATGAATTATCAGGCCACGGTTAATGTGGTCGATGCCGCCAAAGCCGCCGGAGTCAAGCGCTTTTT
GCATATGAGTGCGCTTGGCGTGGTCAACGACCCCAATTTGCCCTATATGGATACGAAATTTCGCGCTCAAAAATATGTTG
AGGCCAGTGGCTTAGACTGGACGGTCTTTCAGCCGTCGGTAATTTTTGGCGAAGGCGATGAATTTATCAATACCTTAGCC
GATTTGGTACGCCGCCCGTTGATGATTGCCCCAGCGCCGTTTGTACCAGTGGTTGGCGATGGCAAAACTAAATTTCAGCC
AGTTTGGCGCGACGATGTGATCGATGCTTTTATCAAAGTCTTGGATGATCACAGCACGATTGGCCAAATCTATCAATTGG
GCGGACCAGAAGCGCTAACCTACGAGCAGATGCTTGATCTGATTATGCAAAAATTGGGCAAAAAACGTAGCAAAATCTAT
GTGCCAGTGCCGTTGATGAAGCCAGCAGTCTTTATGATGGATAAATTGTTGCCCAAGCCACCAGTCACGCCCGCCCAACT
GACAATGCTTAGCCTTGATAATAGTGCGCCGCAATCGGCCACCGAACAGCTGATTGGGCATAGGCCGTTGGCTTTAGGCG
ATGGTATCGACTACATCAAAAAGCCAAACGCTGCTCGCCATAATTAA

Upstream 100 bases:

>100_bases
CCAGCCTCTCGTTAGGGGCAAAATTGGCTTATTTACCCAAAATTCTCTGGCGCTTGCGCAAGCTCAACCGTGAGTTTCCG
CTTGATCAATGGGGGCAAGT

Downstream 100 bases:

>100_bases
ATGATAAACCCGTCTGTTGAATTGATTGCAACAGACGGGTTTTCGGTTTAACCGACAAAGAAGAAGCCAATCCCAACGAT
AATATAGACCGCCAGCAACA

Product: NAD-dependent epimerase/dehydratase

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MILVTGGTGYVGSRLIEKLRQRPEPVRVLVRTPEKAQKLVAGNVSIVKGDVTDPESLIAAMKGVSTVIHLVAIIRERSGG
ISFERMNYQATVNVVDAAKAAGVKRFLHMSALGVVNDPNLPYMDTKFRAQKYVEASGLDWTVFQPSVIFGEGDEFINTLA
DLVRRPLMIAPAPFVPVVGDGKTKFQPVWRDDVIDAFIKVLDDHSTIGQIYQLGGPEALTYEQMLDLIMQKLGKKRSKIY
VPVPLMKPAVFMMDKLLPKPPVTPAQLTMLSLDNSAPQSATEQLIGHRPLALGDGIDYIKKPNAARHN

Sequences:

>Translated_308_residues
MILVTGGTGYVGSRLIEKLRQRPEPVRVLVRTPEKAQKLVAGNVSIVKGDVTDPESLIAAMKGVSTVIHLVAIIRERSGG
ISFERMNYQATVNVVDAAKAAGVKRFLHMSALGVVNDPNLPYMDTKFRAQKYVEASGLDWTVFQPSVIFGEGDEFINTLA
DLVRRPLMIAPAPFVPVVGDGKTKFQPVWRDDVIDAFIKVLDDHSTIGQIYQLGGPEALTYEQMLDLIMQKLGKKRSKIY
VPVPLMKPAVFMMDKLLPKPPVTPAQLTMLSLDNSAPQSATEQLIGHRPLALGDGIDYIKKPNAARHN
>Mature_308_residues
MILVTGGTGYVGSRLIEKLRQRPEPVRVLVRTPEKAQKLVAGNVSIVKGDVTDPESLIAAMKGVSTVIHLVAIIRERSGG
ISFERMNYQATVNVVDAAKAAGVKRFLHMSALGVVNDPNLPYMDTKFRAQKYVEASGLDWTVFQPSVIFGEGDEFINTLA
DLVRRPLMIAPAPFVPVVGDGKTKFQPVWRDDVIDAFIKVLDDHSTIGQIYQLGGPEALTYEQMLDLIMQKLGKKRSKIY
VPVPLMKPAVFMMDKLLPKPPVTPAQLTMLSLDNSAPQSATEQLIGHRPLALGDGIDYIKKPNAARHN

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI193211614, Length=265, Percent_Identity=24.1509433962264, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI8393516, Length=265, Percent_Identity=24.1509433962264, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87081793, Length=296, Percent_Identity=26.0135135135135, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1790656, Length=239, Percent_Identity=28.8702928870293, Blast_Score=73, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17556106, Length=247, Percent_Identity=23.4817813765182, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24667554, Length=248, Percent_Identity=26.2096774193548, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 33823; Mature: 33823

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILVTGGTGYVGSRLIEKLRQRPEPVRVLVRTPEKAQKLVAGNVSIVKGDVTDPESLIAA
CEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCEEEECCCCCHHHHHHH
MKGVSTVIHLVAIIRERSGGISFERMNYQATVNVVDAAKAAGVKRFLHMSALGVVNDPNL
HHHHHHHHHHHHHHHHCCCCCEEEEECEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCC
PYMDTKFRAQKYVEASGLDWTVFQPSVIFGEGDEFINTLADLVRRPLMIAPAPFVPVVGD
CCCCCHHHHHHHHHHCCCEEEEECCEEEECCCHHHHHHHHHHHHCCEEECCCCCCEEECC
GKTKFQPVWRDDVIDAFIKVLDDHSTIGQIYQLGGPEALTYEQMLDLIMQKLGKKRSKIY
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEE
VPVPLMKPAVFMMDKLLPKPPVTPAQLTMLSLDNSAPQSATEQLIGHRPLALGDGIDYIK
EECCCHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHC
KPNAARHN
CCCCCCCC
>Mature Secondary Structure
MILVTGGTGYVGSRLIEKLRQRPEPVRVLVRTPEKAQKLVAGNVSIVKGDVTDPESLIAA
CEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCEEEECCCCCHHHHHHH
MKGVSTVIHLVAIIRERSGGISFERMNYQATVNVVDAAKAAGVKRFLHMSALGVVNDPNL
HHHHHHHHHHHHHHHHCCCCCEEEEECEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCC
PYMDTKFRAQKYVEASGLDWTVFQPSVIFGEGDEFINTLADLVRRPLMIAPAPFVPVVGD
CCCCCHHHHHHHHHHCCCEEEEECCEEEECCCHHHHHHHHHHHHCCEEECCCCCCEEECC
GKTKFQPVWRDDVIDAFIKVLDDHSTIGQIYQLGGPEALTYEQMLDLIMQKLGKKRSKIY
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEE
VPVPLMKPAVFMMDKLLPKPPVTPAQLTMLSLDNSAPQSATEQLIGHRPLALGDGIDYIK
EECCCHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHC
KPNAARHN
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]