Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898279

Identifier: 159898279

GI number: 159898279

Start: 2042279

End: 2043091

Strand: Reverse

Name: 159898279

Synonym: Haur_1755

Alternate gene names: NA

Gene position: 2043091-2042279 (Counterclockwise)

Preceding gene: 159898280

Following gene: 159898273

Centisome position: 32.19

GC content: 48.95

Gene sequence:

>813_bases
ATGATCGAGCAGCAAATCCAGCAATTTAATGCTGATGTTGACCACTTACTTGAGACTGGTCAACTACCATCGTCCGCCGA
TCCGGATCATCAAGCCTTATTACATCTGGCTCAACAGTTGGCACAATTGCGTTTGCAACCAAGCAGCATCCAACAGGCAG
CTACTGCCCAACGGCTTCAACAGCCCAGCATTCGCAAACAGTATTCTGGAGGTTTTATGTTGAAATCAAAAATGCGTATG
GCCTTAGCCGTCGTTATGGCCTTAGTTATCGCAACGATCGCAGTGCCACCATTGCGCAGCTATGCCAACCAAATTTTGCG
CCAAATTGGCTGGTTGAGTGTCACCAATGAGCCAACCAAAGCTGAACAATTGCTCACCGCAACCGAGGTACCACCAATCC
CAGATCAACCAACCGCTACGCCACCGGTGCTCAGCGATGCCAGCCCGTTCAATCTAACCTATTTGCCCGCAGGCTATGTT
GCCAAACCAAGCTACAGCGGTCGTTACTATGCCAACGACAGCACGCCCGACTCGATCTATATCTCAGTGCGCAGCATTGA
AGAAGGCAGCAGCCTCGGGGTTGGGGCAGCCAGCACCACGCCTATCACAGTGCGTAATACCCAAGGCTTGTATATCGAGC
AAGCACCGTTATACATCAAAGCCAAAGAAGGCAAGATGTATCAAGAAGATCTTGAAACAGTCGCGGTTAACTTGGTGCTC
TGGGAAGAAAATGGTCAAATCATCATCATTGAAAGCTATGTACTCGATCAAACAACCCTCATCCAAATTGCCGAAGGCTT
AGAAGTTAACTAA

Upstream 100 bases:

>100_bases
TTGCCGAAATTACTGGTCATAGCGAAAGTAATGTAGGAGTGATGCTCTATCGCAGCCTCCAACGCCTTCGTCAATGGCTG
CCAAATAGAGGATACGAACA

Downstream 100 bases:

>100_bases
TCCAACAAAGCCGCCGTAGCCTGAATCAATGCTTCAAGCACTTGCAACGCTTGATCGATTGATTCAGGTTGCGGCTGAAG
CAGGCTGAATAGTTGGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MIEQQIQQFNADVDHLLETGQLPSSADPDHQALLHLAQQLAQLRLQPSSIQQAATAQRLQQPSIRKQYSGGFMLKSKMRM
ALAVVMALVIATIAVPPLRSYANQILRQIGWLSVTNEPTKAEQLLTATEVPPIPDQPTATPPVLSDASPFNLTYLPAGYV
AKPSYSGRYYANDSTPDSIYISVRSIEEGSSLGVGAASTTPITVRNTQGLYIEQAPLYIKAKEGKMYQEDLETVAVNLVL
WEENGQIIIIESYVLDQTTLIQIAEGLEVN

Sequences:

>Translated_270_residues
MIEQQIQQFNADVDHLLETGQLPSSADPDHQALLHLAQQLAQLRLQPSSIQQAATAQRLQQPSIRKQYSGGFMLKSKMRM
ALAVVMALVIATIAVPPLRSYANQILRQIGWLSVTNEPTKAEQLLTATEVPPIPDQPTATPPVLSDASPFNLTYLPAGYV
AKPSYSGRYYANDSTPDSIYISVRSIEEGSSLGVGAASTTPITVRNTQGLYIEQAPLYIKAKEGKMYQEDLETVAVNLVL
WEENGQIIIIESYVLDQTTLIQIAEGLEVN
>Mature_270_residues
MIEQQIQQFNADVDHLLETGQLPSSADPDHQALLHLAQQLAQLRLQPSSIQQAATAQRLQQPSIRKQYSGGFMLKSKMRM
ALAVVMALVIATIAVPPLRSYANQILRQIGWLSVTNEPTKAEQLLTATEVPPIPDQPTATPPVLSDASPFNLTYLPAGYV
AKPSYSGRYYANDSTPDSIYISVRSIEEGSSLGVGAASTTPITVRNTQGLYIEQAPLYIKAKEGKMYQEDLETVAVNLVL
WEENGQIIIIESYVLDQTTLIQIAEGLEVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29606; Mature: 29606

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQQIQQFNADVDHLLETGQLPSSADPDHQALLHLAQQLAQLRLQPSSIQQAATAQRLQ
CCHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
QPSIRKQYSGGFMLKSKMRMALAVVMALVIATIAVPPLRSYANQILRQIGWLSVTNEPTK
CCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEECCCCHH
AEQLLTATEVPPIPDQPTATPPVLSDASPFNLTYLPAGYVAKPSYSGRYYANDSTPDSIY
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCEEEECCCCCCEEE
ISVRSIEEGSSLGVGAASTTPITVRNTQGLYIEQAPLYIKAKEGKMYQEDLETVAVNLVL
EEEEEECCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEECCCCHHHHHHHEEEEEEEE
WEENGQIIIIESYVLDQTTLIQIAEGLEVN
ECCCCCEEEEEEHHCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MIEQQIQQFNADVDHLLETGQLPSSADPDHQALLHLAQQLAQLRLQPSSIQQAATAQRLQ
CCHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
QPSIRKQYSGGFMLKSKMRMALAVVMALVIATIAVPPLRSYANQILRQIGWLSVTNEPTK
CCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEECCCCHH
AEQLLTATEVPPIPDQPTATPPVLSDASPFNLTYLPAGYVAKPSYSGRYYANDSTPDSIY
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCEEEECCCCCCEEE
ISVRSIEEGSSLGVGAASTTPITVRNTQGLYIEQAPLYIKAKEGKMYQEDLETVAVNLVL
EEEEEECCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEECCCCHHHHHHHEEEEEEEE
WEENGQIIIIESYVLDQTTLIQIAEGLEVN
ECCCCCEEEEEEHHCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA