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The map label for this gene is 159898233

Identifier: 159898233

GI number: 159898233

Start: 1989079

End: 1989684

Strand: Reverse

Name: 159898233

Synonym: Haur_1709

Alternate gene names: NA

Gene position: 1989684-1989079 (Counterclockwise)

Preceding gene: 159898236

Following gene: 159898232

Centisome position: 31.35

GC content: 50.99

Gene sequence:

>606_bases
ATGCACGATACTATGACGAGCACAACACTCTATGCTGCCTGCTTTGAACAAGATTCATTGGCCCAGCACGAGGCCTATAC
CACACTTTGGAATATGCTCTATCGTGTGGCTTATGCCATGCTCCACGAGTACCCCGATGGCGATGCAATTACTACTGATT
GCACCCAAAAAGCCTTGATCAAAATTCATCGCAACATCGAGCAATGTCAAAATCCGGCCACGTTTCGCGAATGGTGCATG
CAAATTGTGCGGCGCACCGTGCTCGACGAATTGCGTCGGCCTGAACATCGCCGTCGCGCCAGCATGCCCGATGCTGAACA
TGGCCCATGGGTTGCCCCAATCGAAACCTTGCAACTTGATGATCTCCGCGCTATCTTAAACGAGGTGATTGAGGAAGGGC
CGCTCAGCGCCCGTTCGCGGCGAGTGGTCGTTGGGCGCTATTTTAGCGAACAAAATGATGATATTTTGGCCCAAACAGAA
AGCGAATTGGCACAAAAACCCGTCTTGGCTTCGCATATTCAAGTAACTCGCGCCAAAAATTTGGCAGCCTTACGCCGCGA
CCCAGCATTAATTGCCCGTTTACGCGAATTTGTTGAAGAAGGATAG

Upstream 100 bases:

>100_bases
GGTGTGGCCGAAGCAAGGCCTAGATCGCAACGCAACCAATGGCTGGTGCGTAGCAAAACCGCCCTTGCAAGCTACACCCA
ACGGTTACTAGGAGGATTGG

Downstream 100 bases:

>100_bases
GTTGGGGCGCTTGCATGCGTCTCCATGCTGAAGCCGCTGATTAGTTGTAGTAGGAATGTTCTATGAATCAAGCAAACTGG
AGCCAGAATGCCATGCAGCA

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MHDTMTSTTLYAACFEQDSLAQHEAYTTLWNMLYRVAYAMLHEYPDGDAITTDCTQKALIKIHRNIEQCQNPATFREWCM
QIVRRTVLDELRRPEHRRRASMPDAEHGPWVAPIETLQLDDLRAILNEVIEEGPLSARSRRVVVGRYFSEQNDDILAQTE
SELAQKPVLASHIQVTRAKNLAALRRDPALIARLREFVEEG

Sequences:

>Translated_201_residues
MHDTMTSTTLYAACFEQDSLAQHEAYTTLWNMLYRVAYAMLHEYPDGDAITTDCTQKALIKIHRNIEQCQNPATFREWCM
QIVRRTVLDELRRPEHRRRASMPDAEHGPWVAPIETLQLDDLRAILNEVIEEGPLSARSRRVVVGRYFSEQNDDILAQTE
SELAQKPVLASHIQVTRAKNLAALRRDPALIARLREFVEEG
>Mature_201_residues
MHDTMTSTTLYAACFEQDSLAQHEAYTTLWNMLYRVAYAMLHEYPDGDAITTDCTQKALIKIHRNIEQCQNPATFREWCM
QIVRRTVLDELRRPEHRRRASMPDAEHGPWVAPIETLQLDDLRAILNEVIEEGPLSARSRRVVVGRYFSEQNDDILAQTE
SELAQKPVLASHIQVTRAKNLAALRRDPALIARLREFVEEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23174; Mature: 23174

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDTMTSTTLYAACFEQDSLAQHEAYTTLWNMLYRVAYAMLHEYPDGDAITTDCTQKALI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KIHRNIEQCQNPATFREWCMQIVRRTVLDELRRPEHRRRASMPDAEHGPWVAPIETLQLD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEECCHHHHHHH
DLRAILNEVIEEGPLSARSRRVVVGRYFSEQNDDILAQTESELAQKPVLASHIQVTRAKN
HHHHHHHHHHHCCCCCCCCCEEHEEHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LAALRRDPALIARLREFVEEG
HHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MHDTMTSTTLYAACFEQDSLAQHEAYTTLWNMLYRVAYAMLHEYPDGDAITTDCTQKALI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KIHRNIEQCQNPATFREWCMQIVRRTVLDELRRPEHRRRASMPDAEHGPWVAPIETLQLD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEECCHHHHHHH
DLRAILNEVIEEGPLSARSRRVVVGRYFSEQNDDILAQTESELAQKPVLASHIQVTRAKN
HHHHHHHHHHHCCCCCCCCCEEHEEHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LAALRRDPALIARLREFVEEG
HHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA