| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898198
Identifier: 159898198
GI number: 159898198
Start: 1940504
End: 1940719
Strand: Reverse
Name: 159898198
Synonym: Haur_1674
Alternate gene names: NA
Gene position: 1940719-1940504 (Counterclockwise)
Preceding gene: 159898199
Following gene: 159898197
Centisome position: 30.58
GC content: 49.54
Gene sequence:
>216_bases ATGCCACGTTCATTAGTAATCGAGCGGGAAAATTTACCAACCGTGGTGCAAGGCTGGCTCGATGCAATCGGCCTTGAGCA TCACGATACCGTCGAATTAGTCTTTACTGAAGGCGAATTGGTGTTGCGCAAGCCACTCAGCCCAGAATTACGGGCTTGGG CTAAGGGCGTAGTCGATGCCTATGATCGCGAGTTTCAATCGTTAATCGGCTTATAA
Upstream 100 bases:
>100_bases TAGATACGAACCAATTGTTCAGAGGCTCGAAGCTAGGAGTACATTAACGACTAGCCCCTGGCCCCTGACCCCTAGCCCCT ACTAACAAAGGACCCACATA
Downstream 100 bases:
>100_bases CCTGAGCCAGCCGCAACGTTGCGCCGGCTTACTCAATAATGAAGTGGCATATGCACTACTTAAAACGTGAAGATATGTTG GATATTCATGGCTATTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MPRSLVIERENLPTVVQGWLDAIGLEHHDTVELVFTEGELVLRKPLSPELRAWAKGVVDAYDREFQSLIGL
Sequences:
>Translated_71_residues MPRSLVIERENLPTVVQGWLDAIGLEHHDTVELVFTEGELVLRKPLSPELRAWAKGVVDAYDREFQSLIGL >Mature_70_residues PRSLVIERENLPTVVQGWLDAIGLEHHDTVELVFTEGELVLRKPLSPELRAWAKGVVDAYDREFQSLIGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8054; Mature: 7923
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSLVIERENLPTVVQGWLDAIGLEHHDTVELVFTEGELVLRKPLSPELRAWAKGVVDA CCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHH YDREFQSLIGL HHHHHHHHHCC >Mature Secondary Structure PRSLVIERENLPTVVQGWLDAIGLEHHDTVELVFTEGELVLRKPLSPELRAWAKGVVDA CCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHH YDREFQSLIGL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA