Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159898187
Identifier: 159898187
GI number: 159898187
Start: 1931546
End: 1932220
Strand: Reverse
Name: 159898187
Synonym: Haur_1663
Alternate gene names: NA
Gene position: 1932220-1931546 (Counterclockwise)
Preceding gene: 159898188
Following gene: 159898185
Centisome position: 30.45
GC content: 43.26
Gene sequence:
>675_bases ATGAATTCGATGATTAACCATTTAGTGCGCAAAGATTGGCAAATTAATCGCACGATGATGTCAATTTACCTCGGTGCCAT GCTAGTTGCGCTAGCAATGCTCCTTGCTGATGATAATAGTTTTGTATTTGGAATTGGGGTAATTCTGATTCTGACGGTAT TAATGATTTTGGGCATTCATCTCACAACCAGCAACGTGATTAGCGAACACACCCAAAAAACCTTGGCGTTTATTATGAGT TTGCCAGTTTCTGGACGTCAATATGCCTTGGCCAAAATTTTGGCCAATCTATCGATGTTTTTGCTGCCTTGGTTGCTGGC CTTGGTTGGCAGTTGGCTAATTATTCTCAGCCGTGATAGCCTGCCCAATGGCTTGGCTGCAATAACAACATTGGCATTGA TCGAAATTTTGCTAAGCTATTGTTTAATTATGATGATGGGACTGGTGACAGGCTCGCAGCATGGGGCAATTGGAGCCATG GCTCTCGCAAATTTGGGGTTTCAAGGGTTTTTATGGGGTATTCTGCAAATTCCAGCGATTGCCCAACATCGTGATAGCAA CAGCCTAGCCTGGAATAGCACCGAACTGAGCATTTTGGCAATCCAACTAGTGATTATCGTAGGTTTATTGGGCATCACAC TTGTCGTCCAACAACGCAAAACCAACTTTATTTAG
Upstream 100 bases:
>100_bases CCTATCAACAAGCAGGCCTAGAAATTCAGGCAGTCGAATTATTAACCCTCGAAGAAATTTTTGTTGCCTCGATTCAAGCG CGGCGCGAAGGAAAAAATCT
Downstream 100 bases:
>100_bases CAAACAGCGCTAGCTACGTGGCTAGCGCAACCATGATTAATGATAGCGCTCAAGCGTGGCATAGGCTACACCACTTTGCA AATTGCCGCGTACAATCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNSMINHLVRKDWQINRTMMSIYLGAMLVALAMLLADDNSFVFGIGVILILTVLMILGIHLTTSNVISEHTQKTLAFIMS LPVSGRQYALAKILANLSMFLLPWLLALVGSWLIILSRDSLPNGLAAITTLALIEILLSYCLIMMMGLVTGSQHGAIGAM ALANLGFQGFLWGILQIPAIAQHRDSNSLAWNSTELSILAIQLVIIVGLLGITLVVQQRKTNFI
Sequences:
>Translated_224_residues MNSMINHLVRKDWQINRTMMSIYLGAMLVALAMLLADDNSFVFGIGVILILTVLMILGIHLTTSNVISEHTQKTLAFIMS LPVSGRQYALAKILANLSMFLLPWLLALVGSWLIILSRDSLPNGLAAITTLALIEILLSYCLIMMMGLVTGSQHGAIGAM ALANLGFQGFLWGILQIPAIAQHRDSNSLAWNSTELSILAIQLVIIVGLLGITLVVQQRKTNFI >Mature_224_residues MNSMINHLVRKDWQINRTMMSIYLGAMLVALAMLLADDNSFVFGIGVILILTVLMILGIHLTTSNVISEHTQKTLAFIMS LPVSGRQYALAKILANLSMFLLPWLLALVGSWLIILSRDSLPNGLAAITTLALIEILLSYCLIMMMGLVTGSQHGAIGAM ALANLGFQGFLWGILQIPAIAQHRDSNSLAWNSTELSILAIQLVIIVGLLGITLVVQQRKTNFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24426; Mature: 24426
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSMINHLVRKDWQINRTMMSIYLGAMLVALAMLLADDNSFVFGIGVILILTVLMILGIH CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LTTSNVISEHTQKTLAFIMSLPVSGRQYALAKILANLSMFLLPWLLALVGSWLIILSRDS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LPNGLAAITTLALIEILLSYCLIMMMGLVTGSQHGAIGAMALANLGFQGFLWGILQIPAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH AQHRDSNSLAWNSTELSILAIQLVIIVGLLGITLVVQQRKTNFI HHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNSMINHLVRKDWQINRTMMSIYLGAMLVALAMLLADDNSFVFGIGVILILTVLMILGIH CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LTTSNVISEHTQKTLAFIMSLPVSGRQYALAKILANLSMFLLPWLLALVGSWLIILSRDS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LPNGLAAITTLALIEILLSYCLIMMMGLVTGSQHGAIGAMALANLGFQGFLWGILQIPAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH AQHRDSNSLAWNSTELSILAIQLVIIVGLLGITLVVQQRKTNFI HHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA