Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898163

Identifier: 159898163

GI number: 159898163

Start: 1895951

End: 1897804

Strand: Reverse

Name: 159898163

Synonym: Haur_1639

Alternate gene names: NA

Gene position: 1897804-1895951 (Counterclockwise)

Preceding gene: 159898164

Following gene: 159898162

Centisome position: 29.9

GC content: 55.77

Gene sequence:

>1854_bases
ATGAACGGACAAACACTCCTCACCCTTGCGCCCTTTGGGCTGATGATGATCATCGCTTTGGTCAGTTGGTTGACTGGTCA
GCGTTTGCGCACGCGCTTGTTGGGTTTAATCGCCAGTGGCTTGACCCTGGTAGCACTGGCAATCGTTTGGTGGCTCGCCC
AAGGCGATTTACCGCTCGATGTTGGGCAACGCGCTTGGCTCAGCAGTTATGGCGTTGGCCCCAACCCACTGATGCGTTCG
CTGCTGACCTTGCATCTTGATGGCTTGAGCTTACTATTTGCGGCAATCACCTTATTGCTCGCCAGCATTGGCTTTGCCCA
CTTGGCTTTGGCCTTGGGACGCGGCTTGGTTGGTTACGGTCGGCTCTGGTCGGGCATCGCAATTATGGTGTTTGGCAGTT
TGCTGGGCATTTTAGCTGGCGATTTGCTGCTGTTGGCTTTTGGCTGGGGCTTGGCCTTGTTGGGCAGCACACTGGCTCGT
CAAGTCGTGGGCAGCGATGATCAACGCACACCTTCAGCCTTGGGAATGAGCGGATTAAGTGGCTTTGCCATTTTGGTCGC
CGTGCTTAGTCAATCGGTACGCCCTGAAGATGTGCTTGATGGCTCGTTTGTGATGGCCGACATTGGAGTTGGTCAATATT
TGCGCACATGGTTGCCGCTGGCAGTGGGCGTAGGCATTGCGCTCGGCTTCCCGCCATTTGGTCGCGTGCTGAGCGACGAT
GAAGATACGACTCCAGCGTTGCATGGCTTGATCATCAGTGCTGGCGTGCCAGTTTTGGCGGTCTACACATTTTTACGTTT
CTTCGGGCTGAATCTTGGCACATGGCCGGAAGCATGGTTTGCAGCCTTGAGCTATGTTGGTGCTTTGGCCAGCATCGTGG
GCGCAGCCTATGCCTTACGAGCGACCCGTTTCGGCCCCTTGGTTGGCTGGCAAGCCGTCGCGCAATGGGGCAATGTCGCC
ATGGCTTTGGGTCGCTACGAGCCAAATCTGCCACTCGGCGGCGAACATAACACCGCCGTGGTGATGGCAACTCTCACGAT
CACAGTGACAACCTTGGTGGCAACAATGCTCGGAGCCATGGCCTTGGGTACGTTGGAGCGCCGCAGTGGCAGCGACCTGA
TCGCCAAACAACCAGCCTTGGGCGCACCATTACGCGCTGCTGGTTTAGCCTATGCCCTTGCCACCGCCGCCGCTGTTGGC
TTGCCCGCCTTACCAAGCTTTTGTGCACGCCGCTGGCTAATGGATTATACGGGCGCGGGTGGTTGGAGCATGGGAGTCTT
TTTCGTCAGCAGTGGCTTGCTCTTGCTCTCGTTTATTGGCTCGAATGCGCTGTTTTGGCGGGTCGATCCCCAACGCCCTG
TAACCCCAGTTGATGCTGGTCGCGCCAACGATGGCTTATTGCTCGGCTTGAGCTTGCCCTTGATTGGCCTGAGTTTGGCT
CCCGAAGTTTTAGTTTGGTTGTTGCAACCAGCCTTACGCACCTTGCAAGCAGTGCCTAGCCCAATGGATGATCTTGGGAG
CATGAGCTGGGGTTTGCGCGGCAGTTTGGTGCTTGGTTTTATGCTGTTGCTCTTTGGCTGTTTTCGCTCACAACGTCAGG
CAATTATGCCTTGGAATGGTGGCGAACAGCCCGATCGTGATGATGGCACAGCTCATTTACCAGCAGCGAGCAGCCGTATG
CTGAGTGGCCTTGCCGTTTTGGGCAATCCACGACCAGCTTTGCGGCAAAGCCATGGCATCTTGCAAGGCCTCAGCAGCCG
GATCGCTTGGGTTTTGCAATTCTTTAGCGGGCGCTACTATCTGACTGGAATTCTAATCGCGGCCCTAACAATTGTCTTGT
TATTAATGCAATAG

Upstream 100 bases:

>100_bases
CTTGATTGCCCGCACCATCTTGGCCGGAATGAACATCGACGACGCACCCTTAATTATCGCCTCGGCTAGTGCTTGCACTG
CCTGTAGCGAAGAATAACGC

Downstream 100 bases:

>100_bases
AGGAAGCTTGGTCACTCGCCGTGACGAGCATAAACAGCCTATGACAATCACCATCTGGATTTTAATTACGTTGCTGGTAG
CCAGCGGCGCAGTCATCGCA

Product: formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter MnhD subunit-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MNGQTLLTLAPFGLMMIIALVSWLTGQRLRTRLLGLIASGLTLVALAIVWWLAQGDLPLDVGQRAWLSSYGVGPNPLMRS
LLTLHLDGLSLLFAAITLLLASIGFAHLALALGRGLVGYGRLWSGIAIMVFGSLLGILAGDLLLLAFGWGLALLGSTLAR
QVVGSDDQRTPSALGMSGLSGFAILVAVLSQSVRPEDVLDGSFVMADIGVGQYLRTWLPLAVGVGIALGFPPFGRVLSDD
EDTTPALHGLIISAGVPVLAVYTFLRFFGLNLGTWPEAWFAALSYVGALASIVGAAYALRATRFGPLVGWQAVAQWGNVA
MALGRYEPNLPLGGEHNTAVVMATLTITVTTLVATMLGAMALGTLERRSGSDLIAKQPALGAPLRAAGLAYALATAAAVG
LPALPSFCARRWLMDYTGAGGWSMGVFFVSSGLLLLSFIGSNALFWRVDPQRPVTPVDAGRANDGLLLGLSLPLIGLSLA
PEVLVWLLQPALRTLQAVPSPMDDLGSMSWGLRGSLVLGFMLLLFGCFRSQRQAIMPWNGGEQPDRDDGTAHLPAASSRM
LSGLAVLGNPRPALRQSHGILQGLSSRIAWVLQFFSGRYYLTGILIAALTIVLLLMQ

Sequences:

>Translated_617_residues
MNGQTLLTLAPFGLMMIIALVSWLTGQRLRTRLLGLIASGLTLVALAIVWWLAQGDLPLDVGQRAWLSSYGVGPNPLMRS
LLTLHLDGLSLLFAAITLLLASIGFAHLALALGRGLVGYGRLWSGIAIMVFGSLLGILAGDLLLLAFGWGLALLGSTLAR
QVVGSDDQRTPSALGMSGLSGFAILVAVLSQSVRPEDVLDGSFVMADIGVGQYLRTWLPLAVGVGIALGFPPFGRVLSDD
EDTTPALHGLIISAGVPVLAVYTFLRFFGLNLGTWPEAWFAALSYVGALASIVGAAYALRATRFGPLVGWQAVAQWGNVA
MALGRYEPNLPLGGEHNTAVVMATLTITVTTLVATMLGAMALGTLERRSGSDLIAKQPALGAPLRAAGLAYALATAAAVG
LPALPSFCARRWLMDYTGAGGWSMGVFFVSSGLLLLSFIGSNALFWRVDPQRPVTPVDAGRANDGLLLGLSLPLIGLSLA
PEVLVWLLQPALRTLQAVPSPMDDLGSMSWGLRGSLVLGFMLLLFGCFRSQRQAIMPWNGGEQPDRDDGTAHLPAASSRM
LSGLAVLGNPRPALRQSHGILQGLSSRIAWVLQFFSGRYYLTGILIAALTIVLLLMQ
>Mature_617_residues
MNGQTLLTLAPFGLMMIIALVSWLTGQRLRTRLLGLIASGLTLVALAIVWWLAQGDLPLDVGQRAWLSSYGVGPNPLMRS
LLTLHLDGLSLLFAAITLLLASIGFAHLALALGRGLVGYGRLWSGIAIMVFGSLLGILAGDLLLLAFGWGLALLGSTLAR
QVVGSDDQRTPSALGMSGLSGFAILVAVLSQSVRPEDVLDGSFVMADIGVGQYLRTWLPLAVGVGIALGFPPFGRVLSDD
EDTTPALHGLIISAGVPVLAVYTFLRFFGLNLGTWPEAWFAALSYVGALASIVGAAYALRATRFGPLVGWQAVAQWGNVA
MALGRYEPNLPLGGEHNTAVVMATLTITVTTLVATMLGAMALGTLERRSGSDLIAKQPALGAPLRAAGLAYALATAAAVG
LPALPSFCARRWLMDYTGAGGWSMGVFFVSSGLLLLSFIGSNALFWRVDPQRPVTPVDAGRANDGLLLGLSLPLIGLSLA
PEVLVWLLQPALRTLQAVPSPMDDLGSMSWGLRGSLVLGFMLLLFGCFRSQRQAIMPWNGGEQPDRDDGTAHLPAASSRM
LSGLAVLGNPRPALRQSHGILQGLSSRIAWVLQFFSGRYYLTGILIAALTIVLLLMQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65037; Mature: 65037

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGQTLLTLAPFGLMMIIALVSWLTGQRLRTRLLGLIASGLTLVALAIVWWLAQGDLPLD
CCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VGQRAWLSSYGVGPNPLMRSLLTLHLDGLSLLFAAITLLLASIGFAHLALALGRGLVGYG
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RLWSGIAIMVFGSLLGILAGDLLLLAFGWGLALLGSTLARQVVGSDDQRTPSALGMSGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCH
GFAILVAVLSQSVRPEDVLDGSFVMADIGVGQYLRTWLPLAVGVGIALGFPPFGRVLSDD
HHHHHHHHHHCCCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EDTTPALHGLIISAGVPVLAVYTFLRFFGLNLGTWPEAWFAALSYVGALASIVGAAYALR
CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ATRFGPLVGWQAVAQWGNVAMALGRYEPNLPLGGEHNTAVVMATLTITVTTLVATMLGAM
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
ALGTLERRSGSDLIAKQPALGAPLRAAGLAYALATAAAVGLPALPSFCARRWLMDYTGAG
HHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
GWSMGVFFVSSGLLLLSFIGSNALFWRVDPQRPVTPVDAGRANDGLLLGLSLPLIGLSLA
CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH
PEVLVWLLQPALRTLQAVPSPMDDLGSMSWGLRGSLVLGFMLLLFGCFRSQRQAIMPWNG
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCC
GEQPDRDDGTAHLPAASSRMLSGLAVLGNPRPALRQSHGILQGLSSRIAWVLQFFSGRYY
CCCCCCCCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LTGILIAALTIVLLLMQ
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNGQTLLTLAPFGLMMIIALVSWLTGQRLRTRLLGLIASGLTLVALAIVWWLAQGDLPLD
CCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VGQRAWLSSYGVGPNPLMRSLLTLHLDGLSLLFAAITLLLASIGFAHLALALGRGLVGYG
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RLWSGIAIMVFGSLLGILAGDLLLLAFGWGLALLGSTLARQVVGSDDQRTPSALGMSGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCH
GFAILVAVLSQSVRPEDVLDGSFVMADIGVGQYLRTWLPLAVGVGIALGFPPFGRVLSDD
HHHHHHHHHHCCCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EDTTPALHGLIISAGVPVLAVYTFLRFFGLNLGTWPEAWFAALSYVGALASIVGAAYALR
CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ATRFGPLVGWQAVAQWGNVAMALGRYEPNLPLGGEHNTAVVMATLTITVTTLVATMLGAM
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
ALGTLERRSGSDLIAKQPALGAPLRAAGLAYALATAAAVGLPALPSFCARRWLMDYTGAG
HHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
GWSMGVFFVSSGLLLLSFIGSNALFWRVDPQRPVTPVDAGRANDGLLLGLSLPLIGLSLA
CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH
PEVLVWLLQPALRTLQAVPSPMDDLGSMSWGLRGSLVLGFMLLLFGCFRSQRQAIMPWNG
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCC
GEQPDRDDGTAHLPAASSRMLSGLAVLGNPRPALRQSHGILQGLSSRIAWVLQFFSGRYY
CCCCCCCCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LTGILIAALTIVLLLMQ
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA