| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898163
Identifier: 159898163
GI number: 159898163
Start: 1895951
End: 1897804
Strand: Reverse
Name: 159898163
Synonym: Haur_1639
Alternate gene names: NA
Gene position: 1897804-1895951 (Counterclockwise)
Preceding gene: 159898164
Following gene: 159898162
Centisome position: 29.9
GC content: 55.77
Gene sequence:
>1854_bases ATGAACGGACAAACACTCCTCACCCTTGCGCCCTTTGGGCTGATGATGATCATCGCTTTGGTCAGTTGGTTGACTGGTCA GCGTTTGCGCACGCGCTTGTTGGGTTTAATCGCCAGTGGCTTGACCCTGGTAGCACTGGCAATCGTTTGGTGGCTCGCCC AAGGCGATTTACCGCTCGATGTTGGGCAACGCGCTTGGCTCAGCAGTTATGGCGTTGGCCCCAACCCACTGATGCGTTCG CTGCTGACCTTGCATCTTGATGGCTTGAGCTTACTATTTGCGGCAATCACCTTATTGCTCGCCAGCATTGGCTTTGCCCA CTTGGCTTTGGCCTTGGGACGCGGCTTGGTTGGTTACGGTCGGCTCTGGTCGGGCATCGCAATTATGGTGTTTGGCAGTT TGCTGGGCATTTTAGCTGGCGATTTGCTGCTGTTGGCTTTTGGCTGGGGCTTGGCCTTGTTGGGCAGCACACTGGCTCGT CAAGTCGTGGGCAGCGATGATCAACGCACACCTTCAGCCTTGGGAATGAGCGGATTAAGTGGCTTTGCCATTTTGGTCGC CGTGCTTAGTCAATCGGTACGCCCTGAAGATGTGCTTGATGGCTCGTTTGTGATGGCCGACATTGGAGTTGGTCAATATT TGCGCACATGGTTGCCGCTGGCAGTGGGCGTAGGCATTGCGCTCGGCTTCCCGCCATTTGGTCGCGTGCTGAGCGACGAT GAAGATACGACTCCAGCGTTGCATGGCTTGATCATCAGTGCTGGCGTGCCAGTTTTGGCGGTCTACACATTTTTACGTTT CTTCGGGCTGAATCTTGGCACATGGCCGGAAGCATGGTTTGCAGCCTTGAGCTATGTTGGTGCTTTGGCCAGCATCGTGG GCGCAGCCTATGCCTTACGAGCGACCCGTTTCGGCCCCTTGGTTGGCTGGCAAGCCGTCGCGCAATGGGGCAATGTCGCC ATGGCTTTGGGTCGCTACGAGCCAAATCTGCCACTCGGCGGCGAACATAACACCGCCGTGGTGATGGCAACTCTCACGAT CACAGTGACAACCTTGGTGGCAACAATGCTCGGAGCCATGGCCTTGGGTACGTTGGAGCGCCGCAGTGGCAGCGACCTGA TCGCCAAACAACCAGCCTTGGGCGCACCATTACGCGCTGCTGGTTTAGCCTATGCCCTTGCCACCGCCGCCGCTGTTGGC TTGCCCGCCTTACCAAGCTTTTGTGCACGCCGCTGGCTAATGGATTATACGGGCGCGGGTGGTTGGAGCATGGGAGTCTT TTTCGTCAGCAGTGGCTTGCTCTTGCTCTCGTTTATTGGCTCGAATGCGCTGTTTTGGCGGGTCGATCCCCAACGCCCTG TAACCCCAGTTGATGCTGGTCGCGCCAACGATGGCTTATTGCTCGGCTTGAGCTTGCCCTTGATTGGCCTGAGTTTGGCT CCCGAAGTTTTAGTTTGGTTGTTGCAACCAGCCTTACGCACCTTGCAAGCAGTGCCTAGCCCAATGGATGATCTTGGGAG CATGAGCTGGGGTTTGCGCGGCAGTTTGGTGCTTGGTTTTATGCTGTTGCTCTTTGGCTGTTTTCGCTCACAACGTCAGG CAATTATGCCTTGGAATGGTGGCGAACAGCCCGATCGTGATGATGGCACAGCTCATTTACCAGCAGCGAGCAGCCGTATG CTGAGTGGCCTTGCCGTTTTGGGCAATCCACGACCAGCTTTGCGGCAAAGCCATGGCATCTTGCAAGGCCTCAGCAGCCG GATCGCTTGGGTTTTGCAATTCTTTAGCGGGCGCTACTATCTGACTGGAATTCTAATCGCGGCCCTAACAATTGTCTTGT TATTAATGCAATAG
Upstream 100 bases:
>100_bases CTTGATTGCCCGCACCATCTTGGCCGGAATGAACATCGACGACGCACCCTTAATTATCGCCTCGGCTAGTGCTTGCACTG CCTGTAGCGAAGAATAACGC
Downstream 100 bases:
>100_bases AGGAAGCTTGGTCACTCGCCGTGACGAGCATAAACAGCCTATGACAATCACCATCTGGATTTTAATTACGTTGCTGGTAG CCAGCGGCGCAGTCATCGCA
Product: formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter MnhD subunit-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 617; Mature: 617
Protein sequence:
>617_residues MNGQTLLTLAPFGLMMIIALVSWLTGQRLRTRLLGLIASGLTLVALAIVWWLAQGDLPLDVGQRAWLSSYGVGPNPLMRS LLTLHLDGLSLLFAAITLLLASIGFAHLALALGRGLVGYGRLWSGIAIMVFGSLLGILAGDLLLLAFGWGLALLGSTLAR QVVGSDDQRTPSALGMSGLSGFAILVAVLSQSVRPEDVLDGSFVMADIGVGQYLRTWLPLAVGVGIALGFPPFGRVLSDD EDTTPALHGLIISAGVPVLAVYTFLRFFGLNLGTWPEAWFAALSYVGALASIVGAAYALRATRFGPLVGWQAVAQWGNVA MALGRYEPNLPLGGEHNTAVVMATLTITVTTLVATMLGAMALGTLERRSGSDLIAKQPALGAPLRAAGLAYALATAAAVG LPALPSFCARRWLMDYTGAGGWSMGVFFVSSGLLLLSFIGSNALFWRVDPQRPVTPVDAGRANDGLLLGLSLPLIGLSLA PEVLVWLLQPALRTLQAVPSPMDDLGSMSWGLRGSLVLGFMLLLFGCFRSQRQAIMPWNGGEQPDRDDGTAHLPAASSRM LSGLAVLGNPRPALRQSHGILQGLSSRIAWVLQFFSGRYYLTGILIAALTIVLLLMQ
Sequences:
>Translated_617_residues MNGQTLLTLAPFGLMMIIALVSWLTGQRLRTRLLGLIASGLTLVALAIVWWLAQGDLPLDVGQRAWLSSYGVGPNPLMRS LLTLHLDGLSLLFAAITLLLASIGFAHLALALGRGLVGYGRLWSGIAIMVFGSLLGILAGDLLLLAFGWGLALLGSTLAR QVVGSDDQRTPSALGMSGLSGFAILVAVLSQSVRPEDVLDGSFVMADIGVGQYLRTWLPLAVGVGIALGFPPFGRVLSDD EDTTPALHGLIISAGVPVLAVYTFLRFFGLNLGTWPEAWFAALSYVGALASIVGAAYALRATRFGPLVGWQAVAQWGNVA MALGRYEPNLPLGGEHNTAVVMATLTITVTTLVATMLGAMALGTLERRSGSDLIAKQPALGAPLRAAGLAYALATAAAVG LPALPSFCARRWLMDYTGAGGWSMGVFFVSSGLLLLSFIGSNALFWRVDPQRPVTPVDAGRANDGLLLGLSLPLIGLSLA PEVLVWLLQPALRTLQAVPSPMDDLGSMSWGLRGSLVLGFMLLLFGCFRSQRQAIMPWNGGEQPDRDDGTAHLPAASSRM LSGLAVLGNPRPALRQSHGILQGLSSRIAWVLQFFSGRYYLTGILIAALTIVLLLMQ >Mature_617_residues MNGQTLLTLAPFGLMMIIALVSWLTGQRLRTRLLGLIASGLTLVALAIVWWLAQGDLPLDVGQRAWLSSYGVGPNPLMRS LLTLHLDGLSLLFAAITLLLASIGFAHLALALGRGLVGYGRLWSGIAIMVFGSLLGILAGDLLLLAFGWGLALLGSTLAR QVVGSDDQRTPSALGMSGLSGFAILVAVLSQSVRPEDVLDGSFVMADIGVGQYLRTWLPLAVGVGIALGFPPFGRVLSDD EDTTPALHGLIISAGVPVLAVYTFLRFFGLNLGTWPEAWFAALSYVGALASIVGAAYALRATRFGPLVGWQAVAQWGNVA MALGRYEPNLPLGGEHNTAVVMATLTITVTTLVATMLGAMALGTLERRSGSDLIAKQPALGAPLRAAGLAYALATAAAVG LPALPSFCARRWLMDYTGAGGWSMGVFFVSSGLLLLSFIGSNALFWRVDPQRPVTPVDAGRANDGLLLGLSLPLIGLSLA PEVLVWLLQPALRTLQAVPSPMDDLGSMSWGLRGSLVLGFMLLLFGCFRSQRQAIMPWNGGEQPDRDDGTAHLPAASSRM LSGLAVLGNPRPALRQSHGILQGLSSRIAWVLQFFSGRYYLTGILIAALTIVLLLMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65037; Mature: 65037
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGQTLLTLAPFGLMMIIALVSWLTGQRLRTRLLGLIASGLTLVALAIVWWLAQGDLPLD CCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VGQRAWLSSYGVGPNPLMRSLLTLHLDGLSLLFAAITLLLASIGFAHLALALGRGLVGYG CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RLWSGIAIMVFGSLLGILAGDLLLLAFGWGLALLGSTLARQVVGSDDQRTPSALGMSGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCH GFAILVAVLSQSVRPEDVLDGSFVMADIGVGQYLRTWLPLAVGVGIALGFPPFGRVLSDD HHHHHHHHHHCCCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC EDTTPALHGLIISAGVPVLAVYTFLRFFGLNLGTWPEAWFAALSYVGALASIVGAAYALR CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ATRFGPLVGWQAVAQWGNVAMALGRYEPNLPLGGEHNTAVVMATLTITVTTLVATMLGAM HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH ALGTLERRSGSDLIAKQPALGAPLRAAGLAYALATAAAVGLPALPSFCARRWLMDYTGAG HHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC GWSMGVFFVSSGLLLLSFIGSNALFWRVDPQRPVTPVDAGRANDGLLLGLSLPLIGLSLA CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH PEVLVWLLQPALRTLQAVPSPMDDLGSMSWGLRGSLVLGFMLLLFGCFRSQRQAIMPWNG HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCC GEQPDRDDGTAHLPAASSRMLSGLAVLGNPRPALRQSHGILQGLSSRIAWVLQFFSGRYY CCCCCCCCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LTGILIAALTIVLLLMQ HHHHHHHHHHHHHHHCC >Mature Secondary Structure MNGQTLLTLAPFGLMMIIALVSWLTGQRLRTRLLGLIASGLTLVALAIVWWLAQGDLPLD CCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VGQRAWLSSYGVGPNPLMRSLLTLHLDGLSLLFAAITLLLASIGFAHLALALGRGLVGYG CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RLWSGIAIMVFGSLLGILAGDLLLLAFGWGLALLGSTLARQVVGSDDQRTPSALGMSGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCH GFAILVAVLSQSVRPEDVLDGSFVMADIGVGQYLRTWLPLAVGVGIALGFPPFGRVLSDD HHHHHHHHHHCCCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC EDTTPALHGLIISAGVPVLAVYTFLRFFGLNLGTWPEAWFAALSYVGALASIVGAAYALR CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ATRFGPLVGWQAVAQWGNVAMALGRYEPNLPLGGEHNTAVVMATLTITVTTLVATMLGAM HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH ALGTLERRSGSDLIAKQPALGAPLRAAGLAYALATAAAVGLPALPSFCARRWLMDYTGAG HHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC GWSMGVFFVSSGLLLLSFIGSNALFWRVDPQRPVTPVDAGRANDGLLLGLSLPLIGLSLA CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH PEVLVWLLQPALRTLQAVPSPMDDLGSMSWGLRGSLVLGFMLLLFGCFRSQRQAIMPWNG HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCC GEQPDRDDGTAHLPAASSRMLSGLAVLGNPRPALRQSHGILQGLSSRIAWVLQFFSGRYY CCCCCCCCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LTGILIAALTIVLLLMQ HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA