| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898162
Identifier: 159898162
GI number: 159898162
Start: 1895161
End: 1895910
Strand: Reverse
Name: 159898162
Synonym: Haur_1638
Alternate gene names: NA
Gene position: 1895910-1895161 (Counterclockwise)
Preceding gene: 159898163
Following gene: 159898161
Centisome position: 29.87
GC content: 49.33
Gene sequence:
>750_bases ATGACAATCACCATCTGGATTTTAATTACGTTGCTGGTAGCCAGCGGCGCAGTCATCGCAATTATGCGCGATTGGCGCTT TAGCCTGATTGCGGTCTTGGTTAATTATATCGCCCAAGGCTTGTTTATTGCCCAACAGCAATTTGTCGTGCCCGATTTGG TGATTGCTGGGCGGCAGTTTAGCTCGCTGGTGTTTATCAAATTAATTACTGGCATCGGCGTGGCGATCATTCTTGGCATT ACCGCGCTAACCTTTTCTCGCGAATATGGGCTGGAAGATCTCGATGAATTTTCCTTGGCTGAACTACGGCGGGCTGCGCG GGTAGCTCAACGAGCCAGCAGCCAAGAAAATCGCAAAGTTGGCGATTACATTGTGCCAATCTGGTCAACTGTGTTGGTAG GCTTGGCCAGTTTCTTCTTGCCACGCGTGTTGCCCTTGGCGGTCGAAATGTATCCCGACCAAGTGGGTTTGGCACGGGCG ATCGATTTTATGTGGTATTGGCAAGTTTTTATTGGCTTAATTAGCTTGGTACTTGCAACCGATATTTTGAAAATTGGGCT AGGCTTGTTGCTCTGCCTCAGTGGCCTCGATTTGCTCTACACCACCTTGGCCAACCGGATTAATATTCTGGCCTTGGGAA CGCTCAGTTTGGTTACCTTGCTCTTGGCTTTGGCGATTGCCTACCTCAGCGGCTTGCTCTATGGTCGCTTCAAAACCTTG AATCTCAGTGAAACGGAGCGCCTGAAATGA
Upstream 100 bases:
>100_bases TACTATCTGACTGGAATTCTAATCGCGGCCCTAACAATTGTCTTGTTATTAATGCAATAGAGGAAGCTTGGTCACTCGCC GTGACGAGCATAAACAGCCT
Downstream 100 bases:
>100_bases CCTTTTTGCTGATGTTTTGCTTGCCATTGGTCATGGCGGCGGTCTGTTTTGGCTTGCGCCAACAACAAGGGTTGGCGCAA ATTTTGGCAATTGGCACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTITIWILITLLVASGAVIAIMRDWRFSLIAVLVNYIAQGLFIAQQQFVVPDLVIAGRQFSSLVFIKLITGIGVAIILGI TALTFSREYGLEDLDEFSLAELRRAARVAQRASSQENRKVGDYIVPIWSTVLVGLASFFLPRVLPLAVEMYPDQVGLARA IDFMWYWQVFIGLISLVLATDILKIGLGLLLCLSGLDLLYTTLANRINILALGTLSLVTLLLALAIAYLSGLLYGRFKTL NLSETERLK
Sequences:
>Translated_249_residues MTITIWILITLLVASGAVIAIMRDWRFSLIAVLVNYIAQGLFIAQQQFVVPDLVIAGRQFSSLVFIKLITGIGVAIILGI TALTFSREYGLEDLDEFSLAELRRAARVAQRASSQENRKVGDYIVPIWSTVLVGLASFFLPRVLPLAVEMYPDQVGLARA IDFMWYWQVFIGLISLVLATDILKIGLGLLLCLSGLDLLYTTLANRINILALGTLSLVTLLLALAIAYLSGLLYGRFKTL NLSETERLK >Mature_248_residues TITIWILITLLVASGAVIAIMRDWRFSLIAVLVNYIAQGLFIAQQQFVVPDLVIAGRQFSSLVFIKLITGIGVAIILGIT ALTFSREYGLEDLDEFSLAELRRAARVAQRASSQENRKVGDYIVPIWSTVLVGLASFFLPRVLPLAVEMYPDQVGLARAI DFMWYWQVFIGLISLVLATDILKIGLGLLLCLSGLDLLYTTLANRINILALGTLSLVTLLLALAIAYLSGLLYGRFKTLN LSETERLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27508; Mature: 27377
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITIWILITLLVASGAVIAIMRDWRFSLIAVLVNYIAQGLFIAQQQFVVPDLVIAGRQF CEEHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH SSLVFIKLITGIGVAIILGITALTFSREYGLEDLDEFSLAELRRAARVAQRASSQENRKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH GDYIVPIWSTVLVGLASFFLPRVLPLAVEMYPDQVGLARAIDFMWYWQVFIGLISLVLAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DILKIGLGLLLCLSGLDLLYTTLANRINILALGTLSLVTLLLALAIAYLSGLLYGRFKTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC NLSETERLK CCCHHHCCC >Mature Secondary Structure TITIWILITLLVASGAVIAIMRDWRFSLIAVLVNYIAQGLFIAQQQFVVPDLVIAGRQF EEHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH SSLVFIKLITGIGVAIILGITALTFSREYGLEDLDEFSLAELRRAARVAQRASSQENRKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH GDYIVPIWSTVLVGLASFFLPRVLPLAVEMYPDQVGLARAIDFMWYWQVFIGLISLVLAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DILKIGLGLLLCLSGLDLLYTTLANRINILALGTLSLVTLLLALAIAYLSGLLYGRFKTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC NLSETERLK CCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA