| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898114
Identifier: 159898114
GI number: 159898114
Start: 1844027
End: 1844710
Strand: Reverse
Name: 159898114
Synonym: Haur_1590
Alternate gene names: NA
Gene position: 1844710-1844027 (Counterclockwise)
Preceding gene: 159898115
Following gene: 159898113
Centisome position: 29.07
GC content: 53.51
Gene sequence:
>684_bases ATGAACCAGCCACCAGAGCCATATCCAGCAGAAACCTTGCGCGAACAAGCTCAGGCCTTTCCCTATCCGCCAACGCCCAA TTTGCAAATCAAGCAGGTGCGGCGAACGGTTTGGTCCAAACAGCTGGGCTGGGCACTAGCCCTAGGCATTATGTTAAGTC TCAGTATTCCGGCGGTGCGGGCACAGGTTGGGCGTTGGCTGCAAGTTGGCACAATCTTGATCGGCGTAGATTCGCCAAGC ACCAACGTGCCTTTGCCAACGCCAGCCCAAACTGCCAGCCCGCCAATCAAGCCAAGCACATTACCAAGCAGTTCATTGCT CGGCCCGCCCGATCAAATCCTGCAATTGGAGCCATATCCGCATGTTCAGCGCTTAATTTGGTTCAGCCAAGGCCAAACGA TCACGCTTGATCTATTGGATTCACAGGCATGGGCCAGCAAAACGATTCTTGCGCTGGCTAACGTCAGGCATACCCAAGTC CATGAGCAGGCAGCGATTTGGCTGCAAGGCCAGCGCGAATTAACCTTCTTCAACCCAAGCACAGGCCAAAGCTACAAAAC CAGCAACTTGAGCAACACCGCTAGCCTAATTTGGGCCGATCACAATCGTACTTATCGCCTCGAAACCGCCAGCGACTTAG CCACAATGCGCGATTTAGCCGAATCGTTTAGCCAAGGAGAATAA
Upstream 100 bases:
>100_bases TTGCCCAAGGCACAGTCAAATCGCGATTGCACCGAGCATTGGTGCGGCTACGCGGTGTTATTGATGGCGAATTTCCTGAG TTGCGGACGGAGCGTTGCGC
Downstream 100 bases:
>100_bases CCATGCGCCGTTTATTAATGTTCGTATGTCTGATCGGGTTGCAATTTGGGTTGATGAGCATCAGCAAAGCTGGCGGTTGG GCCACCACCCCAATCACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNQPPEPYPAETLREQAQAFPYPPTPNLQIKQVRRTVWSKQLGWALALGIMLSLSIPAVRAQVGRWLQVGTILIGVDSPS TNVPLPTPAQTASPPIKPSTLPSSSLLGPPDQILQLEPYPHVQRLIWFSQGQTITLDLLDSQAWASKTILALANVRHTQV HEQAAIWLQGQRELTFFNPSTGQSYKTSNLSNTASLIWADHNRTYRLETASDLATMRDLAESFSQGE
Sequences:
>Translated_227_residues MNQPPEPYPAETLREQAQAFPYPPTPNLQIKQVRRTVWSKQLGWALALGIMLSLSIPAVRAQVGRWLQVGTILIGVDSPS TNVPLPTPAQTASPPIKPSTLPSSSLLGPPDQILQLEPYPHVQRLIWFSQGQTITLDLLDSQAWASKTILALANVRHTQV HEQAAIWLQGQRELTFFNPSTGQSYKTSNLSNTASLIWADHNRTYRLETASDLATMRDLAESFSQGE >Mature_227_residues MNQPPEPYPAETLREQAQAFPYPPTPNLQIKQVRRTVWSKQLGWALALGIMLSLSIPAVRAQVGRWLQVGTILIGVDSPS TNVPLPTPAQTASPPIKPSTLPSSSLLGPPDQILQLEPYPHVQRLIWFSQGQTITLDLLDSQAWASKTILALANVRHTQV HEQAAIWLQGQRELTFFNPSTGQSYKTSNLSNTASLIWADHNRTYRLETASDLATMRDLAESFSQGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25142; Mature: 25142
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPPEPYPAETLREQAQAFPYPPTPNLQIKQVRRTVWSKQLGWALALGIMLSLSIPAVR CCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AQVGRWLQVGTILIGVDSPSTNVPLPTPAQTASPPIKPSTLPSSSLLGPPDQILQLEPYP HHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCC HVQRLIWFSQGQTITLDLLDSQAWASKTILALANVRHTQVHEQAAIWLQGQRELTFFNPS HHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHEEEEECCCEEEEECCC TGQSYKTSNLSNTASLIWADHNRTYRLETASDLATMRDLAESFSQGE CCCCEECCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNQPPEPYPAETLREQAQAFPYPPTPNLQIKQVRRTVWSKQLGWALALGIMLSLSIPAVR CCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AQVGRWLQVGTILIGVDSPSTNVPLPTPAQTASPPIKPSTLPSSSLLGPPDQILQLEPYP HHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCC HVQRLIWFSQGQTITLDLLDSQAWASKTILALANVRHTQVHEQAAIWLQGQRELTFFNPS HHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHEEEEECCCEEEEECCC TGQSYKTSNLSNTASLIWADHNRTYRLETASDLATMRDLAESFSQGE CCCCEECCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA