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The map label for this gene is tolB [H]

Identifier: 159898085

GI number: 159898085

Start: 1812652

End: 1813779

Strand: Reverse

Name: tolB [H]

Synonym: Haur_1561

Alternate gene names: 159898085

Gene position: 1813779-1812652 (Counterclockwise)

Preceding gene: 159898086

Following gene: 159898084

Centisome position: 28.58

GC content: 53.19

Gene sequence:

>1128_bases
GTGAGACGTTCGTTCTATTTGTTGATCCTACTGTGTTTGTTAGCCGCCTGTAGCGAAGCAGGCTCAGCCCTGCCAACCAT
GCAGCCACTCCCCACGAATCAAGCCCAACCAGCGGTCGATGAAACCCAAGCCACCCAAATTGTGGTCGAAAATCAAAGCA
ATGTGCCAGGCAAATTGCTGTTCGTGCGGGTCGAAAACGGCTCGGGTGATATTTGGGTTCACGAAGGCACTGAGGCTCGA
CGCATCACCACATCGCACAAAAAATACCAGCCCAGTTGGTCGCCCGATGGGAGCAAAATCGCCTATATTCAGCGCGAAGA
GAGTTTCGCCGATATTTGGGTGATGAATGCCAATGGCTCCAACAAACAGCAGGTCACGAATAACGAACCAACCAATATCG
CTGCCCGCTCGGAAGATCATATTCAAACCCTGCGTTGGGCGTTTTATCCGCGTTGGTCGCCTGATGGGCAGTTTCTCAGT
TATGTTTCGCAAGCCCAAACACCACGCGATGTTGGCGGCGGCTACCAAGAATATCCGCTTTCGCTATACATCTATGGCAC
TCGCCGCATCGGCACAGGCCAATTTCCTGAGGCTAGTTTCCAACGCTTTGTCCAAGCAGATACCGATTTGAGCCACCCAA
CCTGGTCTGATGATGGCACGATGATTGTCTATAGCCAAGCCGAACGCTGCTTTGGCTGCGAGGCTGCTGAGATCCAGCTG
GGCTACGCGGTGCTTGATCTACCTGGTGGCAACGATGAGTATGGGGTGCTGCAAGGGCCAAGCGAAGATACCTTTAAAGG
TGCGATTGATCCGTCCTTCTCGCCTGATGGCAAATGGCTGACCTTCACCAAAAGCGAAAATGGCTATAGTGATGTGTTTA
TCGTGCCCGCCCCCGATACCAACGGCAAAGTACGCAGTGCTCCCATTAAGCTCACCAGCACCGGACGTTCGCGCCAAGCC
ACATGGTCGCCTGATGGCACAAAACTAGCCTTTTTCACGATTAGCGATCAAGTCACGCTCTCGATTGCCGATCTCACGAT
TGAGGGCAGCACGCCCAGCCTCAGCCAACCAGTCGATATTCGGCGCGACTTGTTTGATGTCGATTCAGGGATGTCGTGGG
CCAAATAA

Upstream 100 bases:

>100_bases
ACAACACCCATGACCTTTCGGGTGGTTCCGCAAACGCTGCGCGTACTCTTACCGCGTACCACTGAAATCAACTAACCCTA
TAGCCAGATTGAGGTTCTGT

Downstream 100 bases:

>100_bases
GGCCCACCCCACCAAGGAGCAACGAAGCCCATGGATTTTGCAATTCCCAGTCATATTGCGGCAATGCGCGAACAAATTAG
CCAATTTTTGCGCGAAAAGG

Product: WD40 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MRRSFYLLILLCLLAACSEAGSALPTMQPLPTNQAQPAVDETQATQIVVENQSNVPGKLLFVRVENGSGDIWVHEGTEAR
RITTSHKKYQPSWSPDGSKIAYIQREESFADIWVMNANGSNKQQVTNNEPTNIAARSEDHIQTLRWAFYPRWSPDGQFLS
YVSQAQTPRDVGGGYQEYPLSLYIYGTRRIGTGQFPEASFQRFVQADTDLSHPTWSDDGTMIVYSQAERCFGCEAAEIQL
GYAVLDLPGGNDEYGVLQGPSEDTFKGAIDPSFSPDGKWLTFTKSENGYSDVFIVPAPDTNGKVRSAPIKLTSTGRSRQA
TWSPDGTKLAFFTISDQVTLSIADLTIEGSTPSLSQPVDIRRDLFDVDSGMSWAK

Sequences:

>Translated_375_residues
MRRSFYLLILLCLLAACSEAGSALPTMQPLPTNQAQPAVDETQATQIVVENQSNVPGKLLFVRVENGSGDIWVHEGTEAR
RITTSHKKYQPSWSPDGSKIAYIQREESFADIWVMNANGSNKQQVTNNEPTNIAARSEDHIQTLRWAFYPRWSPDGQFLS
YVSQAQTPRDVGGGYQEYPLSLYIYGTRRIGTGQFPEASFQRFVQADTDLSHPTWSDDGTMIVYSQAERCFGCEAAEIQL
GYAVLDLPGGNDEYGVLQGPSEDTFKGAIDPSFSPDGKWLTFTKSENGYSDVFIVPAPDTNGKVRSAPIKLTSTGRSRQA
TWSPDGTKLAFFTISDQVTLSIADLTIEGSTPSLSQPVDIRRDLFDVDSGMSWAK
>Mature_375_residues
MRRSFYLLILLCLLAACSEAGSALPTMQPLPTNQAQPAVDETQATQIVVENQSNVPGKLLFVRVENGSGDIWVHEGTEAR
RITTSHKKYQPSWSPDGSKIAYIQREESFADIWVMNANGSNKQQVTNNEPTNIAARSEDHIQTLRWAFYPRWSPDGQFLS
YVSQAQTPRDVGGGYQEYPLSLYIYGTRRIGTGQFPEASFQRFVQADTDLSHPTWSDDGTMIVYSQAERCFGCEAAEIQL
GYAVLDLPGGNDEYGVLQGPSEDTFKGAIDPSFSPDGKWLTFTKSENGYSDVFIVPAPDTNGKVRSAPIKLTSTGRSRQA
TWSPDGTKLAFFTISDQVTLSIADLTIEGSTPSLSQPVDIRRDLFDVDSGMSWAK

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 41410; Mature: 41410

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSFYLLILLCLLAACSEAGSALPTMQPLPTNQAQPAVDETQATQIVVENQSNVPGKLL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEE
FVRVENGSGDIWVHEGTEARRITTSHKKYQPSWSPDGSKIAYIQREESFADIWVMNANGS
EEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCC
NKQQVTNNEPTNIAARSEDHIQTLRWAFYPRWSPDGQFLSYVSQAQTPRDVGGGYQEYPL
CCCEECCCCCCEEEECCHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCE
SLYIYGTRRIGTGQFPEASFQRFVQADTDLSHPTWSDDGTMIVYSQAERCFGCEAAEIQL
EEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHCCCCEEEEEE
GYAVLDLPGGNDEYGVLQGPSEDTFKGAIDPSFSPDGKWLTFTKSENGYSDVFIVPAPDT
EEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCC
NGKVRSAPIKLTSTGRSRQATWSPDGTKLAFFTISDQVTLSIADLTIEGSTPSLSQPVDI
CCCEEECCEEEEECCCCCCCEECCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCHHH
RRDLFDVDSGMSWAK
HHHHHHCCCCCCCCC
>Mature Secondary Structure
MRRSFYLLILLCLLAACSEAGSALPTMQPLPTNQAQPAVDETQATQIVVENQSNVPGKLL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEE
FVRVENGSGDIWVHEGTEARRITTSHKKYQPSWSPDGSKIAYIQREESFADIWVMNANGS
EEEEECCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCC
NKQQVTNNEPTNIAARSEDHIQTLRWAFYPRWSPDGQFLSYVSQAQTPRDVGGGYQEYPL
CCCEECCCCCCEEEECCHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCE
SLYIYGTRRIGTGQFPEASFQRFVQADTDLSHPTWSDDGTMIVYSQAERCFGCEAAEIQL
EEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHCCCCEEEEEE
GYAVLDLPGGNDEYGVLQGPSEDTFKGAIDPSFSPDGKWLTFTKSENGYSDVFIVPAPDT
EEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCC
NGKVRSAPIKLTSTGRSRQATWSPDGTKLAFFTISDQVTLSIADLTIEGSTPSLSQPVDI
CCCEEECCEEEEECCCCCCCEECCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCCCHHH
RRDLFDVDSGMSWAK
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA