Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898019

Identifier: 159898019

GI number: 159898019

Start: 1743105

End: 1743659

Strand: Reverse

Name: 159898019

Synonym: Haur_1494

Alternate gene names: NA

Gene position: 1743659-1743105 (Counterclockwise)

Preceding gene: 159898021

Following gene: 159898018

Centisome position: 27.47

GC content: 52.79

Gene sequence:

>555_bases
ATGGACCAATCAATTTCTGAAGCCCAAGCAGACATGCGTGATGGCTATTATAGTGGGGCTGCTGGAATTTTGGCTTCAGC
ACTGGCATGGTCAATTGCGGCAGGTGTGGCACTTACTGGCTCAGCCGAACGATCAATCTGGGCACTACTACTGGGTGGTA
TGCTGATCTTCCCAGTATCGATTCTGATCAGCAAGGCGCTTGGCGCACGAGGAACGCACACCAAAGGCAATCCGCTTGGG
CAACTCGCGGGCGCTAGCACTTTCTGGCTGGTCTTTTCTATGCCGCTTGCCTATGGTTTAGGTCAGCAAAAACCAAGCTG
GTTCTTTATGGCAATGCTGTTGGTCATCGGGGGACGCTATCTTGTATTCGCAACGCTTTATGGCATGCGGCTCTACTGGG
TTTTAGGCCTTGTCCTTGCGGCAGTAGCAATCGCACTGGCATTTCTAGCAGCAGCTCCTGCTATCGCAGCAAGCGCCGGA
GCCGCAACCGAAATGGTCTTTGCGATTATTTGTCTCGTACAACACCGTCAGTCACTGCGCCAAGCTGTTCGCTAA

Upstream 100 bases:

>100_bases
TATTCTATTCAGACTGAGTAACCTGCTCAGAATTTAATGAAGCCTGCGACCGAGGCATTGGTCGTTATAGTGCACATGAT
GCACAAGGGGATCTGGACGC

Downstream 100 bases:

>100_bases
AATCCTACCTGCATTAGCCTTTGTATCCCAGCATAGTCATTCATGGTTGCATGTGGGGATTGGTCGTTGGGGAACGAGGA
TCGGGTTTTAACCCAGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MDQSISEAQADMRDGYYSGAAGILASALAWSIAAGVALTGSAERSIWALLLGGMLIFPVSILISKALGARGTHTKGNPLG
QLAGASTFWLVFSMPLAYGLGQQKPSWFFMAMLLVIGGRYLVFATLYGMRLYWVLGLVLAAVAIALAFLAAAPAIAASAG
AATEMVFAIICLVQHRQSLRQAVR

Sequences:

>Translated_184_residues
MDQSISEAQADMRDGYYSGAAGILASALAWSIAAGVALTGSAERSIWALLLGGMLIFPVSILISKALGARGTHTKGNPLG
QLAGASTFWLVFSMPLAYGLGQQKPSWFFMAMLLVIGGRYLVFATLYGMRLYWVLGLVLAAVAIALAFLAAAPAIAASAG
AATEMVFAIICLVQHRQSLRQAVR
>Mature_184_residues
MDQSISEAQADMRDGYYSGAAGILASALAWSIAAGVALTGSAERSIWALLLGGMLIFPVSILISKALGARGTHTKGNPLG
QLAGASTFWLVFSMPLAYGLGQQKPSWFFMAMLLVIGGRYLVFATLYGMRLYWVLGLVLAAVAIALAFLAAAPAIAASAG
AATEMVFAIICLVQHRQSLRQAVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19312; Mature: 19312

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQSISEAQADMRDGYYSGAAGILASALAWSIAAGVALTGSAERSIWALLLGGMLIFPVS
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ILISKALGARGTHTKGNPLGQLAGASTFWLVFSMPLAYGLGQQKPSWFFMAMLLVIGGRY
HHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
LVFATLYGMRLYWVLGLVLAAVAIALAFLAAAPAIAASAGAATEMVFAIICLVQHRQSLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
QAVR
HHCC
>Mature Secondary Structure
MDQSISEAQADMRDGYYSGAAGILASALAWSIAAGVALTGSAERSIWALLLGGMLIFPVS
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ILISKALGARGTHTKGNPLGQLAGASTFWLVFSMPLAYGLGQQKPSWFFMAMLLVIGGRY
HHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
LVFATLYGMRLYWVLGLVLAAVAIALAFLAAAPAIAASAGAATEMVFAIICLVQHRQSLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
QAVR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA