BacMap

Definition	Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession	NC_009972
Length	6,346,587

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The map label for this gene is fabG [H]

Identifier: 159898018

GI number: 159898018

Start: 1741948

End: 1742697

Strand: Reverse

Name: fabG [H]

Synonym: Haur_1493

Alternate gene names: 159898018

Gene position: 1742697-1741948 (Counterclockwise)

Preceding gene: 159898019

Following gene: 159898010

Centisome position: 27.46

GC content: 53.2

Gene sequence:

>750_bases
ATGAGCAAGCCATTAGCCGGAAAAGTTGCCTTGGTCACTGGTGGTTCACGCGGAATTGGCGCAGCCAGCGCGGTTGCCTT
GGCTGAACAAGGCGCAGATGTCGCCATTAGTTATGTCGCCTCAGCCAGCAAAGCCGAAGCCGTGGTTGAGCAATTGCAAG
CCCTTGGGGTTAAAGCTGTGGCCTTCCAAGCCGACCAAGCCGATAGCGACCAAGTAGCCGCCTTGGTCAATAAGGTTGTG
TCACATTTTGGCAAGCTCGATATTTTGGTCAATAACGCTGGAGTGATTCAATTAGCTCCATTGAATGATGCTAACGCCGA
TTTGGAAGCCGTTGAGCATATGTTTGCCGTGAATGTGAAGGGTGTCGCCAGCGCAGTGCGGGCAGCAACCCCACTTTTGC
AAGATGGCGGACGAATCATTTCGATTGGCTCAGTCTCGGCAGATACCGCTCCAATTCCTGGTTTTGGCGACTATTCAGCG
ACCAAAGCAGCGGTCGCAGGCTATACCCGCGCATGGGCCAATGAGCTAGGACGACGTGGCATCACGGTTAATAATATTCA
GCCAGGCCCAATCGACACCGATATGGGACCAGGCGATGGCCCAATGCTCGATATGATCACTCAAGCAATTGCGCTCAAAC
GGCTTGGCAAGGCTGAAGAAGTTGGAGCAACCGTGGCATTTTTGGCCAGTCCTGGCGCAGCTTTTATCACTGGCGCGACG
ATTAATGTTGATGGCGGATTGTTGGCCTAA

Upstream 100 bases:

>100_bases
CTTGACAAACCAGCGAATTCTCTATATAGTACCGATCAGTACAAAATATATGTACTAATCGGTACTATATTATTCTAATT
GAAATTTAGAAGGATGTTCG

Downstream 100 bases:

>100_bases
ATCAATAAAGGCCTGTGAGTTAATCCCAACTCACAGGCCATCCATTTAACTATTGGGTTGCTAGGAAGGTTTTCAAATCA
GCGCTACGGGTCTTAATGCG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSKPLAGKVALVTGGSRGIGAASAVALAEQGADVAISYVASASKAEAVVEQLQALGVKAVAFQADQADSDQVAALVNKVV
SHFGKLDILVNNAGVIQLAPLNDANADLEAVEHMFAVNVKGVASAVRAATPLLQDGGRIISIGSVSADTAPIPGFGDYSA
TKAAVAGYTRAWANELGRRGITVNNIQPGPIDTDMGPGDGPMLDMITQAIALKRLGKAEEVGATVAFLASPGAAFITGAT
INVDGGLLA

Sequences:

>Translated_249_residues
MSKPLAGKVALVTGGSRGIGAASAVALAEQGADVAISYVASASKAEAVVEQLQALGVKAVAFQADQADSDQVAALVNKVV
SHFGKLDILVNNAGVIQLAPLNDANADLEAVEHMFAVNVKGVASAVRAATPLLQDGGRIISIGSVSADTAPIPGFGDYSA
TKAAVAGYTRAWANELGRRGITVNNIQPGPIDTDMGPGDGPMLDMITQAIALKRLGKAEEVGATVAFLASPGAAFITGAT
INVDGGLLA
>Mature_248_residues
SKPLAGKVALVTGGSRGIGAASAVALAEQGADVAISYVASASKAEAVVEQLQALGVKAVAFQADQADSDQVAALVNKVVS
HFGKLDILVNNAGVIQLAPLNDANADLEAVEHMFAVNVKGVASAVRAATPLLQDGGRIISIGSVSADTAPIPGFGDYSAT
KAAVAGYTRAWANELGRRGITVNNIQPGPIDTDMGPGDGPMLDMITQAIALKRLGKAEEVGATVAFLASPGAAFITGATI
NVDGGLLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=34.8, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=35.7692307692308, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=31.8367346938775, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=30.7086614173228, Blast_Score=101, Evalue=8e-22,
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=34.4262295081967, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI126723750, Length=256, Percent_Identity=32.421875, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI31542939, Length=197, Percent_Identity=37.0558375634518, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=31.0483870967742, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=32.8125, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI7705925, Length=257, Percent_Identity=29.9610894941634, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI224922801, Length=173, Percent_Identity=36.9942196531792, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI66933014, Length=260, Percent_Identity=29.6153846153846, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI59889578, Length=201, Percent_Identity=32.3383084577114, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI40254986, Length=193, Percent_Identity=30.0518134715026, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI210032110, Length=196, Percent_Identity=26.530612244898, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI4503301, Length=256, Percent_Identity=32.421875, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4504505, Length=203, Percent_Identity=32.512315270936, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI126723191, Length=192, Percent_Identity=32.8125, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI109715829, Length=197, Percent_Identity=29.4416243654822, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI7706318, Length=205, Percent_Identity=27.8048780487805, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI40807363, Length=201, Percent_Identity=26.865671641791, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI142976729, Length=212, Percent_Identity=26.8867924528302, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=41.1522633744856, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=35.9183673469388, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=36.9918699186992, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=34.2857142857143, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=35.1778656126482, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1787335, Length=250, Percent_Identity=38, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=34.5238095238095, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI87082160, Length=257, Percent_Identity=34.6303501945525, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=31.3253012048193, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=30.2325581395349, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=32.6848249027237, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1787545, Length=254, Percent_Identity=26.3779527559055, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786701, Length=200, Percent_Identity=33.5, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787820, Length=184, Percent_Identity=29.8913043478261, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=31.9391634980989, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17561402, Length=261, Percent_Identity=36.0153256704981, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=33.8645418326693, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17560676, Length=261, Percent_Identity=34.0996168582375, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=32.7067669172932, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=31.2741312741313, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=31.9391634980989, Blast_Score=104, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=31.2252964426877, Blast_Score=103, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=32.183908045977, Blast_Score=103, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI71994600, Length=254, Percent_Identity=29.1338582677165, Blast_Score=103, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=34.4569288389513, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17555706, Length=258, Percent_Identity=34.4961240310078, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=29.9625468164794, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17544670, Length=261, Percent_Identity=30.2681992337165, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI115534694, Length=255, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=30.3501945525292, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17531453, Length=259, Percent_Identity=29.3436293436293, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=31.3207547169811, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=30.6513409961686, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=29.5454545454545, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17551412, Length=276, Percent_Identity=31.1594202898551, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=30.3846153846154, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=30.6513409961686, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17538480, Length=264, Percent_Identity=30.6818181818182, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=31.9702602230483, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17538182, Length=262, Percent_Identity=30.1526717557252, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17536025, Length=254, Percent_Identity=32.2834645669291, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17568967, Length=204, Percent_Identity=31.3725490196078, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17536651, Length=259, Percent_Identity=32.046332046332, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17564282, Length=201, Percent_Identity=29.8507462686567, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=253, Percent_Identity=26.4822134387352, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=249, Percent_Identity=26.5060240963855, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982365, Length=193, Percent_Identity=26.4248704663212, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=258, Percent_Identity=25.968992248062, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17507613, Length=202, Percent_Identity=27.2277227722772, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32563809, Length=202, Percent_Identity=27.2277227722772, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322227, Length=197, Percent_Identity=30.9644670050761, Blast_Score=75, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6322226, Length=192, Percent_Identity=32.2916666666667, Blast_Score=73, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6324126, Length=250, Percent_Identity=29.2, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323882, Length=206, Percent_Identity=28.1553398058252, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=35.0806451612903, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=33.9920948616601, Blast_Score=117, Evalue=7e-27,
Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=34.8178137651822, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=35.8565737051793, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=34.7826086956522, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21355319, Length=259, Percent_Identity=34.3629343629344, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24643142, Length=254, Percent_Identity=35.8267716535433, Blast_Score=103, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24644337, Length=255, Percent_Identity=32.5490196078431, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI17737361, Length=261, Percent_Identity=31.8007662835249, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24580925, Length=204, Percent_Identity=33.8235294117647, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24648944, Length=235, Percent_Identity=30.6382978723404, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24649181, Length=198, Percent_Identity=31.8181818181818, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI116007236, Length=247, Percent_Identity=29.1497975708502, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281364892, Length=182, Percent_Identity=30.2197802197802, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355631, Length=177, Percent_Identity=27.683615819209, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357673, Length=198, Percent_Identity=29.7979797979798, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356301, Length=198, Percent_Identity=28.7878787878788, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24640492, Length=193, Percent_Identity=26.4248704663212, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI18859837, Length=195, Percent_Identity=31.7948717948718, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21358495, Length=198, Percent_Identity=28.7878787878788, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24665243, Length=199, Percent_Identity=32.1608040201005, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI221331218, Length=199, Percent_Identity=32.1608040201005, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581726, Length=233, Percent_Identity=26.1802575107296, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24663911, Length=207, Percent_Identity=28.0193236714976, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 24914; Mature: 24782

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPLAGKVALVTGGSRGIGAASAVALAEQGADVAISYVASASKAEAVVEQLQALGVKAV
CCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEE
AFQADQADSDQVAALVNKVVSHFGKLDILVNNAGVIQLAPLNDANADLEAVEHMFAVNVK
EEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHCCHH
GVASAVRAATPLLQDGGRIISIGSVSADTAPIPGFGDYSATKAAVAGYTRAWANELGRRG
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
ITVNNIQPGPIDTDMGPGDGPMLDMITQAIALKRLGKAEEVGATVAFLASPGAAFITGAT
CEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCCEEEEEEE
INVDGGLLA
EECCCCCCC
>Mature Secondary Structure 
SKPLAGKVALVTGGSRGIGAASAVALAEQGADVAISYVASASKAEAVVEQLQALGVKAV
CCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEE
AFQADQADSDQVAALVNKVVSHFGKLDILVNNAGVIQLAPLNDANADLEAVEHMFAVNVK
EEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHCCHH
GVASAVRAATPLLQDGGRIISIGSVSADTAPIPGFGDYSATKAAVAGYTRAWANELGRRG
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
ITVNNIQPGPIDTDMGPGDGPMLDMITQAIALKRLGKAEEVGATVAFLASPGAAFITGAT
CEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCCEEEEEEE
INVDGGLLA
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA