| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is crt [H]
Identifier: 159897731
GI number: 159897731
Start: 1384826
End: 1385611
Strand: Reverse
Name: crt [H]
Synonym: Haur_1202
Alternate gene names: 159897731
Gene position: 1385611-1384826 (Counterclockwise)
Preceding gene: 159897732
Following gene: 159897730
Centisome position: 21.83
GC content: 49.87
Gene sequence:
>786_bases ATGTCATTTGAAAATATTCTGTTTGAAATTAATGAACAAATTGCAGTTATCACGGTTAATCGGCCTAAGGCCTTGAATGC CTTGAATAGCGCAACCATTCGCGAATTAGGCCAAGCCGTCGAGCAATTAGCCAACAATACCCAAGTGCGAGCATTAATTA TTACTGGGGCTGGCGAAAAAGCCTTTGTTGCTGGCGCAGATATTAGCGAGGTTAACAGCATTGAAAGCTCGCTGCAAGGC AGCCAAATGTCGGAAGCCTTGCACGATGTGCTCTGGAAACTAGGCGAATTGCCACAAGTCACAATCGCTGCAATTAATGG TTTTGCGCTTGGTGGTGGCTTTGAGCTAGCCTTGGGCTGCGATATTCGAATCGCCAGCGAACAAGCTCAGGTTGGCTTGC CTGAAGTTGGTTTGGGGCTTGTGCCTGGTTGGGGTGGGGCTTTGCGGGTTCAACGCTTGGCTGGCACTGGTGTGGCCAAA TATTTAGTCCTCACTGGCGAACGGATTCCAGCCAGCGAAGCGCAGCGGCTTGGCTTAATTGAAAAAATCGTGCCTGCTGC CGAATTGCTTGATCAAGCGCATCAATTGGCGGCCAAAGTTGCCAAAAATGCCCCATTAGCGACGGCTCTTGCCAAACGGT TAATCAATCGGGGCGCAGAAATGAGCTTGCGCGATGCCATCGCCTACGAAAATGGCCTCTTTGGCCAACTTTGCGTTACC GAAGATGTCAAGGAAGGGACGAGCGCCTTTTTAGAAAAACGCGCTGCCAAATGGCAAGGGAAATAA
Upstream 100 bases:
>100_bases AGTCAAAATACATCATATGCCCGTTTGATTCGCTAGACCAATGACAATATAACCTTTCTGCCTTTTGATTTTTGCCTTCT GATTTTACATAGGGGGTTCC
Downstream 100 bases:
>100_bases CTCAACCTTTAGGCTGAGTTGAGCAAGCTGCTAGTTAGGTATAATCGTACATACGTTCTGTTATAGGAGTGTGTATCAGA TGCAAAACGCTACTGTTGCC
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: Crotonase [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSFENILFEINEQIAVITVNRPKALNALNSATIRELGQAVEQLANNTQVRALIITGAGEKAFVAGADISEVNSIESSLQG SQMSEALHDVLWKLGELPQVTIAAINGFALGGGFELALGCDIRIASEQAQVGLPEVGLGLVPGWGGALRVQRLAGTGVAK YLVLTGERIPASEAQRLGLIEKIVPAAELLDQAHQLAAKVAKNAPLATALAKRLINRGAEMSLRDAIAYENGLFGQLCVT EDVKEGTSAFLEKRAAKWQGK
Sequences:
>Translated_261_residues MSFENILFEINEQIAVITVNRPKALNALNSATIRELGQAVEQLANNTQVRALIITGAGEKAFVAGADISEVNSIESSLQG SQMSEALHDVLWKLGELPQVTIAAINGFALGGGFELALGCDIRIASEQAQVGLPEVGLGLVPGWGGALRVQRLAGTGVAK YLVLTGERIPASEAQRLGLIEKIVPAAELLDQAHQLAAKVAKNAPLATALAKRLINRGAEMSLRDAIAYENGLFGQLCVT EDVKEGTSAFLEKRAAKWQGK >Mature_260_residues SFENILFEINEQIAVITVNRPKALNALNSATIRELGQAVEQLANNTQVRALIITGAGEKAFVAGADISEVNSIESSLQGS QMSEALHDVLWKLGELPQVTIAAINGFALGGGFELALGCDIRIASEQAQVGLPEVGLGLVPGWGGALRVQRLAGTGVAKY LVLTGERIPASEAQRLGLIEKIVPAAELLDQAHQLAAKVAKNAPLATALAKRLINRGAEMSLRDAIAYENGLFGQLCVTE DVKEGTSAFLEKRAAKWQGK
Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=262, Percent_Identity=42.3664122137405, Blast_Score=192, Evalue=3e-49, Organism=Homo sapiens, GI4502327, Length=259, Percent_Identity=37.4517374517375, Blast_Score=130, Evalue=9e-31, Organism=Homo sapiens, GI150378541, Length=255, Percent_Identity=34.1176470588235, Blast_Score=113, Evalue=1e-25, Organism=Homo sapiens, GI68989263, Length=208, Percent_Identity=35.5769230769231, Blast_Score=110, Evalue=9e-25, Organism=Homo sapiens, GI20127408, Length=183, Percent_Identity=31.1475409836066, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI157694516, Length=225, Percent_Identity=25.3333333333333, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI213417737, Length=225, Percent_Identity=25.3333333333333, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI31542718, Length=245, Percent_Identity=28.9795918367347, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI37594469, Length=263, Percent_Identity=29.277566539924, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI37594471, Length=263, Percent_Identity=29.277566539924, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI70995211, Length=269, Percent_Identity=27.1375464684015, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI157694520, Length=204, Percent_Identity=25, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI261878539, Length=110, Percent_Identity=45.4545454545455, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI62530384, Length=245, Percent_Identity=24.4897959183673, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1787659, Length=254, Percent_Identity=40.1574803149606, Blast_Score=179, Evalue=2e-46, Organism=Escherichia coli, GI221142681, Length=262, Percent_Identity=37.0229007633588, Blast_Score=162, Evalue=3e-41, Organism=Escherichia coli, GI1788682, Length=198, Percent_Identity=35.8585858585859, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1790281, Length=187, Percent_Identity=35.8288770053476, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI87082183, Length=264, Percent_Identity=29.5454545454545, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1788597, Length=262, Percent_Identity=29.0076335877863, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787660, Length=262, Percent_Identity=32.4427480916031, Blast_Score=107, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17554946, Length=253, Percent_Identity=41.501976284585, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI25145438, Length=248, Percent_Identity=41.5322580645161, Blast_Score=180, Evalue=5e-46, Organism=Caenorhabditis elegans, GI17540714, Length=233, Percent_Identity=33.4763948497854, Blast_Score=150, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17536985, Length=258, Percent_Identity=29.0697674418605, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI25144157, Length=193, Percent_Identity=33.6787564766839, Blast_Score=110, Evalue=7e-25, Organism=Caenorhabditis elegans, GI25144160, Length=193, Percent_Identity=33.6787564766839, Blast_Score=110, Evalue=8e-25, Organism=Caenorhabditis elegans, GI17558304, Length=176, Percent_Identity=34.0909090909091, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17560910, Length=250, Percent_Identity=28.8, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17534483, Length=249, Percent_Identity=23.6947791164659, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17508953, Length=216, Percent_Identity=30.0925925925926, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17508951, Length=216, Percent_Identity=30.0925925925926, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI25144276, Length=216, Percent_Identity=30.0925925925926, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI25141363, Length=200, Percent_Identity=29, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17540306, Length=238, Percent_Identity=28.9915966386555, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17549921, Length=241, Percent_Identity=25.7261410788382, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320241, Length=195, Percent_Identity=26.6666666666667, Blast_Score=86, Evalue=8e-18, Organism=Drosophila melanogaster, GI20129971, Length=250, Percent_Identity=41.2, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI24653477, Length=250, Percent_Identity=41.2, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI24653139, Length=252, Percent_Identity=32.9365079365079, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI19922422, Length=249, Percent_Identity=26.5060240963855, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI21357171, Length=207, Percent_Identity=29.951690821256, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI24650670, Length=211, Percent_Identity=30.3317535545024, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24583077, Length=186, Percent_Identity=33.8709677419355, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24583079, Length=186, Percent_Identity=33.8709677419355, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI19921000, Length=174, Percent_Identity=33.9080459770115, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI19920382, Length=250, Percent_Identity=24.8, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI28571729, Length=176, Percent_Identity=28.9772727272727, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI28571730, Length=176, Percent_Identity=28.9772727272727, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI19921018, Length=211, Percent_Identity=32.7014218009479, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24583165, Length=213, Percent_Identity=31.4553990610329, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24654903, Length=188, Percent_Identity=25, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.55 [H]
Molecular weight: Translated: 27589; Mature: 27458
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFENILFEINEQIAVITVNRPKALNALNSATIRELGQAVEQLANNTQVRALIITGAGEK CCHHHHHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCE AFVAGADISEVNSIESSLQGSQMSEALHDVLWKLGELPQVTIAAINGFALGGGFELALGC EEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCEEEEEEC DIRIASEQAQVGLPEVGLGLVPGWGGALRVQRLAGTGVAKYLVLTGERIPASEAQRLGLI EEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHH EKIVPAAELLDQAHQLAAKVAKNAPLATALAKRLINRGAEMSLRDAIAYENGLFGQLCVT HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEC EDVKEGTSAFLEKRAAKWQGK HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SFENILFEINEQIAVITVNRPKALNALNSATIRELGQAVEQLANNTQVRALIITGAGEK CHHHHHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCE AFVAGADISEVNSIESSLQGSQMSEALHDVLWKLGELPQVTIAAINGFALGGGFELALGC EEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCEEEEEEC DIRIASEQAQVGLPEVGLGLVPGWGGALRVQRLAGTGVAKYLVLTGERIPASEAQRLGLI EEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHH EKIVPAAELLDQAHQLAAKVAKNAPLATALAKRLINRGAEMSLRDAIAYENGLFGQLCVT HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEC EDVKEGTSAFLEKRAAKWQGK HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8655474; 11466286 [H]