| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897700
Identifier: 159897700
GI number: 159897700
Start: 1344927
End: 1345634
Strand: Direct
Name: 159897700
Synonym: Haur_1171
Alternate gene names: NA
Gene position: 1344927-1345634 (Clockwise)
Preceding gene: 159897685
Following gene: 159897715
Centisome position: 21.19
GC content: 50.85
Gene sequence:
>708_bases ATGAAGCAATTGAAATGTTTGATGCTGGCAATGTTGTTAATCGTGCCAATTCGCGCTAGTACTGCCGCGAGCAGCTATTG TTTCCCCGAACTCAAGGCCCATTGCGTCGAAGCGCCATTTGACGATTATTGGCGTGATAACGGTGGTCTGCCAGTTTTTG GCTACCCAATTACGGCCAAAGAACGCTACCAAGCTCCCGATCATGGCCCAACCCTCAGCATTCAATGGACTGAACGCCAA CGGTTGGAGCATCATAGCAATTTGACGGGCACGCCCTACGAAATTCAAATTGGCTTGTTGGGCAAAGAGCGCCTCGCCCA ACTCAACCGCGAATTGGAACCCGCTGCCCGCCGTCCAGCCGCCGATTGTTTGTGGTTTGGTGAAACTGGACATAATGTTT GTAATCAAGATCTGGGGATGGGGTTTAAGCAATATTGGGAGAGCCATGGCACAACCACCGCCGGCTTGGATAGCTATGGG CGTTCATTACAATTGTTTGGGTTGCCGCTAACCAGCGCTCAATATGAAATTAATGCTGATGGCGACCAAGTGGTTACCCA GTGGTTTGAACGCGCTCGCTTCGAGTGGCATCCTGATAATCCCGACCAATTCAAGGTGTTATTGGGGCGTTTGGGCAGCG AATTAACTGGGCTTGAACCAGTAATTGAGCCTGAGCCAATTCCTGGGCCAAACCCGCCTGATAAGTAA
Upstream 100 bases:
>100_bases GAAGTATAGGCTCTAAATTCGTATAGAACTTGACATTTTCTACCAAAGCTGGGGTTGAGGCTTATGCTATACTCGCAATC TAAAGCAAGGAGTTTTTGCG
Downstream 100 bases:
>100_bases AAAGAGGCGCTGGTAACGTCCAACGCCTCAGTATATTTCCTACAAACCAGTCATTTTTTCTAAATCTTCGGGGTAGCGTG CGCCTTGGATGTTCACTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKQLKCLMLAMLLIVPIRASTAASSYCFPELKAHCVEAPFDDYWRDNGGLPVFGYPITAKERYQAPDHGPTLSIQWTERQ RLEHHSNLTGTPYEIQIGLLGKERLAQLNRELEPAARRPAADCLWFGETGHNVCNQDLGMGFKQYWESHGTTTAGLDSYG RSLQLFGLPLTSAQYEINADGDQVVTQWFERARFEWHPDNPDQFKVLLGRLGSELTGLEPVIEPEPIPGPNPPDK
Sequences:
>Translated_235_residues MKQLKCLMLAMLLIVPIRASTAASSYCFPELKAHCVEAPFDDYWRDNGGLPVFGYPITAKERYQAPDHGPTLSIQWTERQ RLEHHSNLTGTPYEIQIGLLGKERLAQLNRELEPAARRPAADCLWFGETGHNVCNQDLGMGFKQYWESHGTTTAGLDSYG RSLQLFGLPLTSAQYEINADGDQVVTQWFERARFEWHPDNPDQFKVLLGRLGSELTGLEPVIEPEPIPGPNPPDK >Mature_235_residues MKQLKCLMLAMLLIVPIRASTAASSYCFPELKAHCVEAPFDDYWRDNGGLPVFGYPITAKERYQAPDHGPTLSIQWTERQ RLEHHSNLTGTPYEIQIGLLGKERLAQLNRELEPAARRPAADCLWFGETGHNVCNQDLGMGFKQYWESHGTTTAGLDSYG RSLQLFGLPLTSAQYEINADGDQVVTQWFERARFEWHPDNPDQFKVLLGRLGSELTGLEPVIEPEPIPGPNPPDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26449; Mature: 26449
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLKCLMLAMLLIVPIRASTAASSYCFPELKAHCVEAPFDDYWRDNGGLPVFGYPITAK CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCH ERYQAPDHGPTLSIQWTERQRLEHHSNLTGTPYEIQIGLLGKERLAQLNRELEPAARRPA HHCCCCCCCCEEEEEECHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCHHHCCCC ADCLWFGETGHNVCNQDLGMGFKQYWESHGTTTAGLDSYGRSLQLFGLPLTSAQYEINAD HHEEEECCCCCHHHHHHHCCCHHHHHHHCCCEECCHHHHCCEEEEEECCCCCCEEEECCC GDQVVTQWFERARFEWHPDNPDQFKVLLGRLGSELTGLEPVIEPEPIPGPNPPDK HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQLKCLMLAMLLIVPIRASTAASSYCFPELKAHCVEAPFDDYWRDNGGLPVFGYPITAK CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCEEEECCCCCH ERYQAPDHGPTLSIQWTERQRLEHHSNLTGTPYEIQIGLLGKERLAQLNRELEPAARRPA HHCCCCCCCCEEEEEECHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCHHHCCCC ADCLWFGETGHNVCNQDLGMGFKQYWESHGTTTAGLDSYGRSLQLFGLPLTSAQYEINAD HHEEEECCCCCHHHHHHHCCCHHHHHHHCCCEECCHHHHCCEEEEEECCCCCCEEEECCC GDQVVTQWFERARFEWHPDNPDQFKVLLGRLGSELTGLEPVIEPEPIPGPNPPDK HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA