Click here to switch to the map view.

The map label for this gene is glnA [H]

Identifier: 159897670

GI number: 159897670

Start: 1304668

End: 1306089

Strand: Reverse

Name: glnA [H]

Synonym: Haur_1141

Alternate gene names: 159897670

Gene position: 1306089-1304668 (Counterclockwise)

Preceding gene: 159897671

Following gene: 159897667

Centisome position: 20.58

GC content: 50.28

Gene sequence:

>1422_bases
ATGACACTTCGCGATTTTCTCGAAATTCCCTACGAAGAGTTGGAAGAACTGAACCTGGCTGCTAAAGCCCAACGGGTTGG
CCGCACGCCATTGGACAAGTTGCAAGAAGAGCGCATGCGTTATTTGAATGACGAAAAGCGCATCAAGGCCGTGACCGTCT
GTTTCACCGACCTTGAAGGCCGCTTGCATATGCTCGATTACGACAAGAAATTCTTGTTGAAATCAGCTGATAACTTGACC
TTTGATGGCTCGTCGATCCGTGGCTTCTCACAACAATCAGAATCCGACTTGCGCTTGGGCATCGATTGGGGTGCATTCTA
TTGGTTGCCAGCCGATATCTTTGGGCCTGGTAAAGTCTTGGTGTTCGGCCAAGTGTTGGAACGCGATGGTTCGGCCTATC
CTGCCGACTTCCGCTCACGCTTGCAAGCCTACACCGCTGAATTATTTGCCAAACAAGGGATTGTTTGTAACGTTGCTAAC
GAAATTGAAGGCTTCTTGTTCAAGGGCCGCAACGCCGAGCAACACTATCGCGATACTGGTCACTTCGATTTTGTGAGCAC
TGGCGGCTATTACAACTCATTGCCAGGCGATCCACTGCGCTTGTTCATCGATGCTGCTGCTGAAGCACAACGCGCAATGG
GCTTTGCCAATGAAAAAGATCACCCAGAAGTTGCGCCTTCACAGTTCGAAATGAACTACTCCTACACCGAAGCTTCGGTC
GCAGCCGACCAAGTGTTGCTGTATAAATTGATTTGTCGCCAATTGGCCTACAAACTCGATTTGACCGCCAGCTTCTTGCC
CAAGCCAGTGACTGGTGTCAATGGTAGCGGGATGCACACCAACATGTCGTTGGCCAAGGGCGATACCAACTTGTTCTATG
ATGCTAACGGCGAAGAAGGCCTCTCAGAATATGGCTGGAGCTATGTTGATCGCATCTTGACCAGTGGCTTGGATCTGTGT
TTGTTGCTGAATTCCAGCGTCAACTCATATCGCCGCCTCGACCCACACTACGAAGCGCCAAACCAAATCAAGGCTTCGGC
GATCGACCGTGGTTCGATGGTGCGGATTCCATTGGGCAACGCTCGTTCAGCACGGATCGAAGTGCGCTCGATTGCTCCAG
ATGCCAACCCACACATGGCGATTTACTCGATCTTGAAAGTTGGTTTGGAAGGGCCAAAGGCCGATACTTCAGTTCGCAAG
GGCGCAAAAGTATTGCCAGACAACATCTACGATGCAATTGATGCCTTCCAAGCAAGCGAAATTATCGCTTCAGTCTTGGG
CGAAGAAATTCAATCCAAGTATGCTGAATTGAAAATTGCCTCGGCTGATCGCTGTCCACATCGCTTGGGCACGTTGATCA
AGCGCTCGGAAGTTCAATTCCACCACGAAGTGACCAACCAATTCCTCTGGAGCAAGTTCTAA

Upstream 100 bases:

>100_bases
GTTCCTTGGCAATATCCCAAAACTTTCCCAAGCACAATACTAAACCACCATGCTCGCGGGACACCGAGTATGGCTTTGTT
AGTACAAAGGATGACACACC

Downstream 100 bases:

>100_bases
TTCTTGGTTCGAGGTTAAGTCAACGCCCAGGGCAATTGCTCTGGGCGTTGCTGTTTTTAGGCTTTTCATGCCCTCACCCC
CTAGTCCCCTCTCCCGCCGA

Product: glutamine synthetase catalytic region

Products: NA

Alternate protein names: GS; Glutamate--ammonia ligase [H]

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MTLRDFLEIPYEELEELNLAAKAQRVGRTPLDKLQEERMRYLNDEKRIKAVTVCFTDLEGRLHMLDYDKKFLLKSADNLT
FDGSSIRGFSQQSESDLRLGIDWGAFYWLPADIFGPGKVLVFGQVLERDGSAYPADFRSRLQAYTAELFAKQGIVCNVAN
EIEGFLFKGRNAEQHYRDTGHFDFVSTGGYYNSLPGDPLRLFIDAAAEAQRAMGFANEKDHPEVAPSQFEMNYSYTEASV
AADQVLLYKLICRQLAYKLDLTASFLPKPVTGVNGSGMHTNMSLAKGDTNLFYDANGEEGLSEYGWSYVDRILTSGLDLC
LLLNSSVNSYRRLDPHYEAPNQIKASAIDRGSMVRIPLGNARSARIEVRSIAPDANPHMAIYSILKVGLEGPKADTSVRK
GAKVLPDNIYDAIDAFQASEIIASVLGEEIQSKYAELKIASADRCPHRLGTLIKRSEVQFHHEVTNQFLWSKF

Sequences:

>Translated_473_residues
MTLRDFLEIPYEELEELNLAAKAQRVGRTPLDKLQEERMRYLNDEKRIKAVTVCFTDLEGRLHMLDYDKKFLLKSADNLT
FDGSSIRGFSQQSESDLRLGIDWGAFYWLPADIFGPGKVLVFGQVLERDGSAYPADFRSRLQAYTAELFAKQGIVCNVAN
EIEGFLFKGRNAEQHYRDTGHFDFVSTGGYYNSLPGDPLRLFIDAAAEAQRAMGFANEKDHPEVAPSQFEMNYSYTEASV
AADQVLLYKLICRQLAYKLDLTASFLPKPVTGVNGSGMHTNMSLAKGDTNLFYDANGEEGLSEYGWSYVDRILTSGLDLC
LLLNSSVNSYRRLDPHYEAPNQIKASAIDRGSMVRIPLGNARSARIEVRSIAPDANPHMAIYSILKVGLEGPKADTSVRK
GAKVLPDNIYDAIDAFQASEIIASVLGEEIQSKYAELKIASADRCPHRLGTLIKRSEVQFHHEVTNQFLWSKF
>Mature_472_residues
TLRDFLEIPYEELEELNLAAKAQRVGRTPLDKLQEERMRYLNDEKRIKAVTVCFTDLEGRLHMLDYDKKFLLKSADNLTF
DGSSIRGFSQQSESDLRLGIDWGAFYWLPADIFGPGKVLVFGQVLERDGSAYPADFRSRLQAYTAELFAKQGIVCNVANE
IEGFLFKGRNAEQHYRDTGHFDFVSTGGYYNSLPGDPLRLFIDAAAEAQRAMGFANEKDHPEVAPSQFEMNYSYTEASVA
ADQVLLYKLICRQLAYKLDLTASFLPKPVTGVNGSGMHTNMSLAKGDTNLFYDANGEEGLSEYGWSYVDRILTSGLDLCL
LLNSSVNSYRRLDPHYEAPNQIKASAIDRGSMVRIPLGNARSARIEVRSIAPDANPHMAIYSILKVGLEGPKADTSVRKG
AKVLPDNIYDAIDAFQASEIIASVLGEEIQSKYAELKIASADRCPHRLGTLIKRSEVQFHHEVTNQFLWSKF

Specific function: Unknown

COG id: COG0174

COG function: function code E; Glutamine synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1790301, Length=410, Percent_Identity=30.2439024390244, Blast_Score=142, Evalue=5e-35,
Organism=Escherichia coli, GI87081870, Length=175, Percent_Identity=33.1428571428571, Blast_Score=89, Evalue=9e-19,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008147
- InterPro:   IPR014746
- InterPro:   IPR008146
- InterPro:   IPR004809 [H]

Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]

EC number: =6.3.1.2 [H]

Molecular weight: Translated: 52995; Mature: 52864

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRDFLEIPYEELEELNLAAKAQRVGRTPLDKLQEERMRYLNDEKRIKAVTVCFTDLEG
CCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHEEEEEEEEECCCC
RLHMLDYDKKFLLKSADNLTFDGSSIRGFSQQSESDLRLGIDWGAFYWLPADIFGPGKVL
EEEEECCCHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEEECEEEEECCCCCCCCCEE
VFGQVLERDGSAYPADFRSRLQAYTAELFAKQGIVCNVANEIEGFLFKGRNAEQHYRDTG
EEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHCHHEECCCCCHHHHCCCC
HFDFVSTGGYYNSLPGDPLRLFIDAAAEAQRAMGFANEKDHPEVAPSQFEMNYSYTEASV
CEEEEECCCCCCCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHH
AADQVLLYKLICRQLAYKLDLTASFLPKPVTGVNGSGMHTNMSLAKGDTNLFYDANGEEG
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCC
LSEYGWSYVDRILTSGLDLCLLLNSSVNSYRRLDPHYEAPNQIKASAIDRGSMVRIPLGN
HHHHCHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEECCC
ARSARIEVRSIAPDANPHMAIYSILKVGLEGPKADTSVRKGAKVLPDNIYDAIDAFQASE
CCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
IIASVLGEEIQSKYAELKIASADRCPHRLGTLIKRSEVQFHHEVTNQFLWSKF
HHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLRDFLEIPYEELEELNLAAKAQRVGRTPLDKLQEERMRYLNDEKRIKAVTVCFTDLEG
CHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHEEEEEEEEECCCC
RLHMLDYDKKFLLKSADNLTFDGSSIRGFSQQSESDLRLGIDWGAFYWLPADIFGPGKVL
EEEEECCCHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEEECEEEEECCCCCCCCCEE
VFGQVLERDGSAYPADFRSRLQAYTAELFAKQGIVCNVANEIEGFLFKGRNAEQHYRDTG
EEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHCHHEECCCCCHHHHCCCC
HFDFVSTGGYYNSLPGDPLRLFIDAAAEAQRAMGFANEKDHPEVAPSQFEMNYSYTEASV
CEEEEECCCCCCCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHH
AADQVLLYKLICRQLAYKLDLTASFLPKPVTGVNGSGMHTNMSLAKGDTNLFYDANGEEG
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCC
LSEYGWSYVDRILTSGLDLCLLLNSSVNSYRRLDPHYEAPNQIKASAIDRGSMVRIPLGN
HHHHCHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEECCC
ARSARIEVRSIAPDANPHMAIYSILKVGLEGPKADTSVRKGAKVLPDNIYDAIDAFQASE
CCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
IIASVLGEEIQSKYAELKIASADRCPHRLGTLIKRSEVQFHHEVTNQFLWSKF
HHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA