| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897654
Identifier: 159897654
GI number: 159897654
Start: 1290110
End: 1290592
Strand: Direct
Name: 159897654
Synonym: Haur_1125
Alternate gene names: NA
Gene position: 1290110-1290592 (Clockwise)
Preceding gene: 159897653
Following gene: 159897655
Centisome position: 20.33
GC content: 49.69
Gene sequence:
>483_bases ATGAACGAATTAATCAATCAAGCCCAAGCAGCCTTACTCAGCGGCGATCTCAGCCGTGCCCGTGGTCATCTAGCTCAGGT CATTCAACAAGAACCGCTGAATGTTTTAGCATGGCTGATGCTCAGCGAAGTAGTGCACGAGCCTGAACGCCAGCGCGAAT GTTTACAGCGGGTTTTGACGCTAGAACCACAAAACCAAACCGCCCAAAAACGCCTCGCCGCCCTCGATCAACCAACTACT GTAACTCAAGCCGCCCAACCGCCAACGCCCCTAAAACTGCGCCAACCACAACCAATAATTGCGCCACAAACACCGACTTC AGCCACCATGCCACCAATTTCGATTATTTCAATTGGCCTAGTCTTATTAGTTCTCTTGGTTATTGCAATCGTGGTGCTGC GCGGTTTACCTGAAACTGCTAGCGAGCAATCGCGGGTTGTGGAAGGTGTGCTTTTATTGGTTAGCTACATTCGATTCTTT TAA
Upstream 100 bases:
>100_bases AGTGGGAGAGGGGTCGGGGTGAGGGGAGCCTAGAACCAACATGGAACCTTGGTTTTTGGTTAAAATACTGCTGCTCTTTT AACCAAATAGGTGCAATTCC
Downstream 100 bases:
>100_bases TTGAGAGAATATATGGATACTAATACAATTCTCAAACAAGCGATTATCCAACTTAATCAAATGATTGGCCATACATTTGA TGTGCTTCAACTGAGCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNELINQAQAALLSGDLSRARGHLAQVIQQEPLNVLAWLMLSEVVHEPERQRECLQRVLTLEPQNQTAQKRLAALDQPTT VTQAAQPPTPLKLRQPQPIIAPQTPTSATMPPISIISIGLVLLVLLVIAIVVLRGLPETASEQSRVVEGVLLLVSYIRFF
Sequences:
>Translated_160_residues MNELINQAQAALLSGDLSRARGHLAQVIQQEPLNVLAWLMLSEVVHEPERQRECLQRVLTLEPQNQTAQKRLAALDQPTT VTQAAQPPTPLKLRQPQPIIAPQTPTSATMPPISIISIGLVLLVLLVIAIVVLRGLPETASEQSRVVEGVLLLVSYIRFF >Mature_160_residues MNELINQAQAALLSGDLSRARGHLAQVIQQEPLNVLAWLMLSEVVHEPERQRECLQRVLTLEPQNQTAQKRLAALDQPTT VTQAAQPPTPLKLRQPQPIIAPQTPTSATMPPISIISIGLVLLVLLVIAIVVLRGLPETASEQSRVVEGVLLLVSYIRFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17587; Mature: 17587
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELINQAQAALLSGDLSRARGHLAQVIQQEPLNVLAWLMLSEVVHEPERQRECLQRVLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LEPQNQTAQKRLAALDQPTTVTQAAQPPTPLKLRQPQPIIAPQTPTSATMPPISIISIGL CCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VLLVLLVIAIVVLRGLPETASEQSRVVEGVLLLVSYIRFF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNELINQAQAALLSGDLSRARGHLAQVIQQEPLNVLAWLMLSEVVHEPERQRECLQRVLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LEPQNQTAQKRLAALDQPTTVTQAAQPPTPLKLRQPQPIIAPQTPTSATMPPISIISIGL CCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VLLVLLVIAIVVLRGLPETASEQSRVVEGVLLLVSYIRFF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA