Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897614
Identifier: 159897614
GI number: 159897614
Start: 1242739
End: 1243023
Strand: Direct
Name: 159897614
Synonym: Haur_1085
Alternate gene names: NA
Gene position: 1242739-1243023 (Clockwise)
Preceding gene: 159897607
Following gene: 159897616
Centisome position: 19.58
GC content: 44.56
Gene sequence:
>285_bases ATGAACCACCCAACGATTCAAAAAGATACTGGTGCTTGGATCGCCTTTACCTGGATTTCGTTCTTCATTTCGATTGTGGC GTTGCTTTTGGGCATTTATCATGCGCCAGTCGATATTTGGGTCAAGAGCTTTTTGGCGGTTGCTGCCTTGTTTGCGATTG GTAGCACCTTCACCTTGGCCAAAACCATTCGCGATAACTCGGAAGCCAGCAAAATGATTAATCGTTATGCCGATGCCAAA ACCGAGCAAATTATCTCTAATTATGAGATTCGCGCTTCAGTCTAA
Upstream 100 bases:
>100_bases CACGCTGTTGGCGCAATGTATCGGCCAATGTATCTCGCGGTGTATGTGCTACCACTTGCGCCGATTTATACTGCTTGCAT CAACACAAGGAGCGAGCAAT
Downstream 100 bases:
>100_bases TGAAAGTCAAAAGTCAGAGGGTAAAAGTCAAAAGGGATCAGGATTCAGCGATCAGGGGCTAGATGTTAACGCAGCGGCGC AGAGAATGGATGGCGATGGG
Product: YiaAB two helix domain-containing protein
Products: NA
Alternate protein names: YiaA/B Two Helix Domain Family; YiaAB Two Helix Domain Protein; Transmembrane Protein
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MNHPTIQKDTGAWIAFTWISFFISIVALLLGIYHAPVDIWVKSFLAVAALFAIGSTFTLAKTIRDNSEASKMINRYADAK TEQIISNYEIRASV
Sequences:
>Translated_94_residues MNHPTIQKDTGAWIAFTWISFFISIVALLLGIYHAPVDIWVKSFLAVAALFAIGSTFTLAKTIRDNSEASKMINRYADAK TEQIISNYEIRASV >Mature_94_residues MNHPTIQKDTGAWIAFTWISFFISIVALLLGIYHAPVDIWVKSFLAVAALFAIGSTFTLAKTIRDNSEASKMINRYADAK TEQIISNYEIRASV
Specific function: Unknown
COG id: COG4298
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10495; Mature: 10495
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHPTIQKDTGAWIAFTWISFFISIVALLLGIYHAPVDIWVKSFLAVAALFAIGSTFTLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH KTIRDNSEASKMINRYADAKTEQIISNYEIRASV HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure MNHPTIQKDTGAWIAFTWISFFISIVALLLGIYHAPVDIWVKSFLAVAALFAIGSTFTLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH KTIRDNSEASKMINRYADAKTEQIISNYEIRASV HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA