| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897611
Identifier: 159897611
GI number: 159897611
Start: 1238833
End: 1239141
Strand: Reverse
Name: 159897611
Synonym: Haur_1082
Alternate gene names: NA
Gene position: 1239141-1238833 (Counterclockwise)
Preceding gene: 159897612
Following gene: 159897610
Centisome position: 19.52
GC content: 44.66
Gene sequence:
>309_bases ATGGCTAACAAATCATGCCCGCGCTGCCAAGCACCAATCGGTTTAAACACCTTCCTGATGAGCACCAATCCGTTTCAAAT CAAATGCCCAGCTTGCCGCCAAACCATCAAATATAAGGCGTGGGTCATAGCCGTGAATGGATTATTGATTGCAGCATTCG TAGGCTTACTTATCTATCTTATTCCACAGATTATCGCCGACCCACGCGGTTTTCGCTCGACCATGCGCCTAATAATGTTT AGTTCCATCGTCATTTTGTTAATCCTTTATGGCATCACATACATGATTGATCCATTCGAACGGTCGTAA
Upstream 100 bases:
>100_bases TCGATGTTCTATATTCTTTTCCCCAAACAATGGTTATTTGCCTATAACTGCTAGTCTATGGTAGGATAGCGCTATCGCCA CTTAGTTGAGAGAGAACCAT
Downstream 100 bases:
>100_bases GCAAGGATGCAGTTGTTAGGGGTCAGGGGTCAGCAGCATATCGTGTAAAGCGATAGATCTTCTGTGATCTTCGCGTTCTT CGCGGTTAACATCTCCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MANKSCPRCQAPIGLNTFLMSTNPFQIKCPACRQTIKYKAWVIAVNGLLIAAFVGLLIYLIPQIIADPRGFRSTMRLIMF SSIVILLILYGITYMIDPFERS
Sequences:
>Translated_102_residues MANKSCPRCQAPIGLNTFLMSTNPFQIKCPACRQTIKYKAWVIAVNGLLIAAFVGLLIYLIPQIIADPRGFRSTMRLIMF SSIVILLILYGITYMIDPFERS >Mature_101_residues ANKSCPRCQAPIGLNTFLMSTNPFQIKCPACRQTIKYKAWVIAVNGLLIAAFVGLLIYLIPQIIADPRGFRSTMRLIMFS SIVILLILYGITYMIDPFERS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11487; Mature: 11356
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKSCPRCQAPIGLNTFLMSTNPFQIKCPACRQTIKYKAWVIAVNGLLIAAFVGLLIYL CCCCCCCCCCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPQIIADPRGFRSTMRLIMFSSIVILLILYGITYMIDPFERS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ANKSCPRCQAPIGLNTFLMSTNPFQIKCPACRQTIKYKAWVIAVNGLLIAAFVGLLIYL CCCCCCCCCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPQIIADPRGFRSTMRLIMFSSIVILLILYGITYMIDPFERS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA