| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is yaaT [H]
Identifier: 159897605
GI number: 159897605
Start: 1231139
End: 1232665
Strand: Reverse
Name: yaaT [H]
Synonym: Haur_1076
Alternate gene names: 159897605
Gene position: 1232665-1231139 (Counterclockwise)
Preceding gene: 159897606
Following gene: 159897604
Centisome position: 19.42
GC content: 53.77
Gene sequence:
>1527_bases ATGCCCTTGGTTGTTGGAGTTAAGTTTAAAGATTCGGGCAAAATTTACCATTTTGACCCAAATCAACATCATTTAGAGCT AGGCGATGCCGTAGTAGTTGAAACGGTACGCGGGCTAGAGCTTGGCAAAGTGGCAGCACCGATCGAAGATCTACCCGATT CTGATTTGATTGCCGAACTCAAACCAGTGATTCGCCAGCCCACCACCGAAGATTATGACCGCATGCGAGTGCTAGCTGAG CGACGCGATGATGTATTGCGGATTTGTGCCGAACGAATTAGCGTGCATCGCTTGCCGATGCGCCTGATTCGCAGCGATTG GAATTTTGATGGCACCCGTTTGACGATCTATTTCACCTCGCAGCAGCGGGTTGATTTTCGCCATTTGGTACGCGAACTAG CGCGAATTTTCCATGCACGGATCGAATTACGGCAAATTGGGGCACGCGATGAAGCCAAACTGCTGGGCGGATTAGGGCCA TGTGGCCGACCATTGTGCTGCTCAACCTTCTTGCCCGATTTTGCCCGCGTTTCGGTCAAAATGGCCAAAGATCAAGACTT GCCACTCAATCCCTCGAAAATTTCGGGGGTTTGCGGGCGCTTGCTCTGCTGCCTTTCGTATGAACAAGAGCAATATCTTG AGATTAAGGCCGAGCTGCCAACCCGTGGCGAGCAGGTCAAAACGCCCGAAGGCATTGGCTATGTAGTTGCTGTCAATACC ATTCGCGAAACCGTTACCGTTGATATTGAAAGTAATTACCACGATTTCAAAGCTGATCAACTTGAAACCCTGACAGGCGC AGCTGGAGCGATTGCCCGCGAACGGCTCGAACAAGGCGAGGCCGCACCAATTGCCCAAAAACGTTTCAACCGCCCAGTTG GCGAAACGATTAAATCAACGCTGAACAACTGGGATAACGAAGATTGGGGCTTGGATGAACTACGCTCGTTTGAGGAAGAT CCCGAAAGTTCAGGCGATAAGCCCAAACCACGCCCCAAGCCAGCCCAACAAGCTCGGCCAAACCCCGAGGCACGCGAACA ACGTACAAATCCGAACGAGCAACGGCCACGCTTTGACCGAGCAGAACGCCAGAAACGCTTTAATCGCTCGGAGGCGGCCA ACGCTGAGGCTAGCGTAGCCCCAACACCAAGCAACGAGCCAAGTGAACGGAAACCACGTCATGCCTTCAAGCGCAAAGGC GACACGACCCCAACGCCTGAGCGACCAAAACTACCGGCGACAGTGCGTCAGCAATCGCTGGGCGGCGTGCCAGAGCAACT AACTCCGCGCGGTCGGCAGCCCTCGACGAATGACCCTGATGAACCGAAGCAACCAAATCGTCGCCGACGGCGCGGCAATG GTGGTAATGGCAATCAGCAAGGGCAACAGCAAGTTCAGCCCAAGCCCAACCAGCCGCAAGTAACATCAAGCAAGCCATCT ACGGTCGAGAAAACCGAATCAGAATCAGCGAAGCCAGAGGCGAATAACGAGCGTCGTTCGCCAAGGCGACGCAAACGCCG CAGCTAA
Upstream 100 bases:
>100_bases TAGCTACCTGATACTTACCACTACCACAAAATTCTGTTCGATGTATTAACCGAACATTCTGCCTTTTGACTTCTGCCTTT TACTTTTTTAGGATAGATCT
Downstream 100 bases:
>100_bases ACGCAAAAGCTCCTTGGTTTTGTACCAAGGAGCTTTTTTAATACTTGCTAAAACAACAACACCGCGAGCTTACTCACGGT GTTGCTTGGAGCGGTACGCA
Product: PSP1 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MPLVVGVKFKDSGKIYHFDPNQHHLELGDAVVVETVRGLELGKVAAPIEDLPDSDLIAELKPVIRQPTTEDYDRMRVLAE RRDDVLRICAERISVHRLPMRLIRSDWNFDGTRLTIYFTSQQRVDFRHLVRELARIFHARIELRQIGARDEAKLLGGLGP CGRPLCCSTFLPDFARVSVKMAKDQDLPLNPSKISGVCGRLLCCLSYEQEQYLEIKAELPTRGEQVKTPEGIGYVVAVNT IRETVTVDIESNYHDFKADQLETLTGAAGAIARERLEQGEAAPIAQKRFNRPVGETIKSTLNNWDNEDWGLDELRSFEED PESSGDKPKPRPKPAQQARPNPEAREQRTNPNEQRPRFDRAERQKRFNRSEAANAEASVAPTPSNEPSERKPRHAFKRKG DTTPTPERPKLPATVRQQSLGGVPEQLTPRGRQPSTNDPDEPKQPNRRRRRGNGGNGNQQGQQQVQPKPNQPQVTSSKPS TVEKTESESAKPEANNERRSPRRRKRRS
Sequences:
>Translated_508_residues MPLVVGVKFKDSGKIYHFDPNQHHLELGDAVVVETVRGLELGKVAAPIEDLPDSDLIAELKPVIRQPTTEDYDRMRVLAE RRDDVLRICAERISVHRLPMRLIRSDWNFDGTRLTIYFTSQQRVDFRHLVRELARIFHARIELRQIGARDEAKLLGGLGP CGRPLCCSTFLPDFARVSVKMAKDQDLPLNPSKISGVCGRLLCCLSYEQEQYLEIKAELPTRGEQVKTPEGIGYVVAVNT IRETVTVDIESNYHDFKADQLETLTGAAGAIARERLEQGEAAPIAQKRFNRPVGETIKSTLNNWDNEDWGLDELRSFEED PESSGDKPKPRPKPAQQARPNPEAREQRTNPNEQRPRFDRAERQKRFNRSEAANAEASVAPTPSNEPSERKPRHAFKRKG DTTPTPERPKLPATVRQQSLGGVPEQLTPRGRQPSTNDPDEPKQPNRRRRRGNGGNGNQQGQQQVQPKPNQPQVTSSKPS TVEKTESESAKPEANNERRSPRRRKRRS >Mature_507_residues PLVVGVKFKDSGKIYHFDPNQHHLELGDAVVVETVRGLELGKVAAPIEDLPDSDLIAELKPVIRQPTTEDYDRMRVLAER RDDVLRICAERISVHRLPMRLIRSDWNFDGTRLTIYFTSQQRVDFRHLVRELARIFHARIELRQIGARDEAKLLGGLGPC GRPLCCSTFLPDFARVSVKMAKDQDLPLNPSKISGVCGRLLCCLSYEQEQYLEIKAELPTRGEQVKTPEGIGYVVAVNTI RETVTVDIESNYHDFKADQLETLTGAAGAIARERLEQGEAAPIAQKRFNRPVGETIKSTLNNWDNEDWGLDELRSFEEDP ESSGDKPKPRPKPAQQARPNPEAREQRTNPNEQRPRFDRAERQKRFNRSEAANAEASVAPTPSNEPSERKPRHAFKRKGD TTPTPERPKLPATVRQQSLGGVPEQLTPRGRQPSTNDPDEPKQPNRRRRRGNGGNGNQQGQQQVQPKPNQPQVTSSKPST VEKTESESAKPEANNERRSPRRRKRRS
Specific function: Essential for the phosphorelay during initiation of sporulation. May control the level of phosphorylated spo0A through spo0E activity during sporulation [H]
COG id: COG1774
COG function: function code S; Uncharacterized homolog of PSP1
Gene ontology:
Cell location: Cytoplasm. Note=In the vegetative phase, localized throughout the periphery of the cell and the division septum. In the sporulation stages, fluorescence of the yaaT-GFP fusion protein was observed as two dots at the sides of an asymmetric septum and at th
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PSP1 C-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007557 [H]
Pfam domain/function: PF04468 PSP1 [H]
EC number: NA
Molecular weight: Translated: 57493; Mature: 57362
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVVGVKFKDSGKIYHFDPNQHHLELGDAVVVETVRGLELGKVAAPIEDLPDSDLIAEL CCEEEEEEECCCCCEEEECCCCCEEECCCHHHHHHHHCCHHHHHHCCHHHCCCCHHHHHH KPVIRQPTTEDYDRMRVLAERRDDVLRICAERISVHRLPMRLIRSDWNFDGTRLTIYFTS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC QQRVDFRHLVRELARIFHARIELRQIGARDEAKLLGGLGPCGRPLCCSTFLPDFARVSVK CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHH MAKDQDLPLNPSKISGVCGRLLCCLSYEQEQYLEIKAELPTRGEQVKTPEGIGYVVAVNT HCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCCCCEEEEEEEC IRETVTVDIESNYHDFKADQLETLTGAAGAIARERLEQGEAAPIAQKRFNRPVGETIKST CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHH LNNWDNEDWGLDELRSFEEDPESSGDKPKPRPKPAQQARPNPEAREQRTNPNEQRPRFDR HHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCCCCCCCCHHH AERQKRFNRSEAANAEASVAPTPSNEPSERKPRHAFKRKGDTTPTPERPKLPATVRQQSL HHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHH GGVPEQLTPRGRQPSTNDPDEPKQPNRRRRRGNGGNGNQQGQQQVQPKPNQPQVTSSKPS CCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC TVEKTESESAKPEANNERRSPRRRKRRS CHHHCCCCCCCCCCCCHHCCHHHHHCCC >Mature Secondary Structure PLVVGVKFKDSGKIYHFDPNQHHLELGDAVVVETVRGLELGKVAAPIEDLPDSDLIAEL CEEEEEEECCCCCEEEECCCCCEEECCCHHHHHHHHCCHHHHHHCCHHHCCCCHHHHHH KPVIRQPTTEDYDRMRVLAERRDDVLRICAERISVHRLPMRLIRSDWNFDGTRLTIYFTS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC QQRVDFRHLVRELARIFHARIELRQIGARDEAKLLGGLGPCGRPLCCSTFLPDFARVSVK CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHH MAKDQDLPLNPSKISGVCGRLLCCLSYEQEQYLEIKAELPTRGEQVKTPEGIGYVVAVNT HCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCCCCEEEEEEEC IRETVTVDIESNYHDFKADQLETLTGAAGAIARERLEQGEAAPIAQKRFNRPVGETIKST CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHH LNNWDNEDWGLDELRSFEEDPESSGDKPKPRPKPAQQARPNPEAREQRTNPNEQRPRFDR HHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHHHHCCCCCCCCCCHHH AERQKRFNRSEAANAEASVAPTPSNEPSERKPRHAFKRKGDTTPTPERPKLPATVRQQSL HHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHH GGVPEQLTPRGRQPSTNDPDEPKQPNRRRRRGNGGNGNQQGQQQVQPKPNQPQVTSSKPS CCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC TVEKTESESAKPEANNERRSPRRRKRRS CHHHCCCCCCCCCCCCHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]