| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897604
Identifier: 159897604
GI number: 159897604
Start: 1224941
End: 1225483
Strand: Reverse
Name: 159897604
Synonym: Haur_1075
Alternate gene names: NA
Gene position: 1225483-1224941 (Counterclockwise)
Preceding gene: 159897605
Following gene: 159897603
Centisome position: 19.31
GC content: 46.41
Gene sequence:
>543_bases ATGTACTCAACTTATATGCAGGAATTAGCCAGCTTTGTGGTAGAAGCAAACGTGGTCGAGACGGTTGCCGGGGTTGATGA GGCAGTCATAGCTGAACTTGAGCAAGCTCGTGGATATCGTTTGCCAGCCTGTTATCGTGCCTTTTTACAAACCTTTGGCA AGACCAATACATGGCGTTGGTTTGATGGCGATTATGCCTCGATCGATCGGTTTGATGAGACGCTTGAAGTCGTGCAAGAT TTGATAGCAGAGGGCTTAATCCCTTGGTTAGACGATCGAGCGATTATTCCATTCACTCAACATGCAGGTTATGTTGTCTA TTATATTCGGTGTGATGATGGTGATGATCCAGCAGTTTTTTGCGCTATCTCAGGTGATGAAACTACTCCTGCTGAATGCA GCCAGCTTGCGCCAGCGTTTTCGATCTGGCTGCGTAATAGTGCCTTTGACTCAATCGAACGCCGATCGTGGACTGAAGTG AAGCCTATATCAAGTACATTCGGCAGCCTGAGGGAACAGTCGATGAACGAAGCAAATTTTTAA
Upstream 100 bases:
>100_bases ACCACTGCCCGCTGATCCCTGACCCCTGAATCCTCGCCCCTCTTCGTTTGCCTTTATAATTTGGGTTACCACAACGATTG AGAAATTGGGAGAATCTCAG
Downstream 100 bases:
>100_bases TCCAATATATGCAGGAATATAGAAAATTTTATGAGCATTTTAGTGCTCAATGCTATCAAACAGACATACAAAAGCAACAC TTAACGAGTCCTTGGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MYSTYMQELASFVVEANVVETVAGVDEAVIAELEQARGYRLPACYRAFLQTFGKTNTWRWFDGDYASIDRFDETLEVVQD LIAEGLIPWLDDRAIIPFTQHAGYVVYYIRCDDGDDPAVFCAISGDETTPAECSQLAPAFSIWLRNSAFDSIERRSWTEV KPISSTFGSLREQSMNEANF
Sequences:
>Translated_180_residues MYSTYMQELASFVVEANVVETVAGVDEAVIAELEQARGYRLPACYRAFLQTFGKTNTWRWFDGDYASIDRFDETLEVVQD LIAEGLIPWLDDRAIIPFTQHAGYVVYYIRCDDGDDPAVFCAISGDETTPAECSQLAPAFSIWLRNSAFDSIERRSWTEV KPISSTFGSLREQSMNEANF >Mature_180_residues MYSTYMQELASFVVEANVVETVAGVDEAVIAELEQARGYRLPACYRAFLQTFGKTNTWRWFDGDYASIDRFDETLEVVQD LIAEGLIPWLDDRAIIPFTQHAGYVVYYIRCDDGDDPAVFCAISGDETTPAECSQLAPAFSIWLRNSAFDSIERRSWTEV KPISSTFGSLREQSMNEANF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20373; Mature: 20373
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSTYMQELASFVVEANVVETVAGVDEAVIAELEQARGYRLPACYRAFLQTFGKTNTWRW CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE FDGDYASIDRFDETLEVVQDLIAEGLIPWLDDRAIIPFTQHAGYVVYYIRCDDGDDPAVF ECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECEEECCCCEEEEEEEECCCCCCEEE CAISGDETTPAECSQLAPAFSIWLRNSAFDSIERRSWTEVKPISSTFGSLREQSMNEANF EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYSTYMQELASFVVEANVVETVAGVDEAVIAELEQARGYRLPACYRAFLQTFGKTNTWRW CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE FDGDYASIDRFDETLEVVQDLIAEGLIPWLDDRAIIPFTQHAGYVVYYIRCDDGDDPAVF ECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECEEECCCCEEEEEEEECCCCCCEEE CAISGDETTPAECSQLAPAFSIWLRNSAFDSIERRSWTEVKPISSTFGSLREQSMNEANF EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA