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The map label for this gene is yvrB [H]

Identifier: 159897584

GI number: 159897584

Start: 1203861

End: 1204895

Strand: Reverse

Name: yvrB [H]

Synonym: Haur_1055

Alternate gene names: 159897584

Gene position: 1204895-1203861 (Counterclockwise)

Preceding gene: 159897585

Following gene: 159897583

Centisome position: 18.98

GC content: 54.49

Gene sequence:

>1035_bases
TTGGCACGATTAATATCCAAGCCCTATTGGCGCGATTTGCTAGCATTTGGCGGGCTACTTGGCTTGTTGCTCTTGACGAT
GGTGCTGAGCCTTGGCATCGGTGCGGTGCAATTTAGCCCCAGCGAAGTGCTGCAAGCAATTATTCAGCCTCAGCATTCCA
GCACCAACAGCACTGCTGTCACGATTGTTTGGGATTTGCGGCTGGCTCGCATGCTCTTGGCGGCCTTGATTGGCGCTGGT
TTGGCTAGTGCGGGCGCGGCATTTCAGGGCTTATTTCAAAATCCCTTGGCTGATCCATTTGCGATTGGTGCATCGGGCGG
GGCGGCATTGGGCGCAACTTTAGCGATTGTGCTGCAAATTCAGTGGCAATGGCTGGGGTTTAGTGCGGTTGCCCTGTGTG
CTTTTATTGGTGCTTTGTTGGCGGTTGGCGTGGTGTATACAATTGCCGAAGTTGGTGGGCAAGCACCACGCACGGCCTTG
CTCTTGGCAGGAGCAGCGCTCAGCACCATGCTTTCGGCTACAGTTTCGTTATTGTTATTGATGAATGAGCAACCGTTGTA
TGAGGTGTTTGCTTGGTTATTGGGCGGTTTATCGGGCCGTAGCTGGGATAATTTGCGCAGCAGTTTGCCGTTTGTGGTAT
TGGGTATTGCCTGGCTTTGGCTGTTAGCACGGCGGATCGATGCCCTGAGTTGTGGCGATGAAGTAGCCCAAAGTTTGGGC
TTATCGCTGTGGCGTACTCGAAGTGCCGTGATTGCCGCCGCCAGCATCACGACCGCCGCAACCGTGGCCAATGGTGGCAT
TATCGGCTTTGTTGGCTTGATTGCGCCGCATATTGCTCGCTTGCTGTTTGGAGCCAACCATGCCCGTTTGATTCCTGCCA
GCGGCTTGGTTGGGGCAATGTTGTTGGTGCTCGCTGATACAACGGCTCGTACAATCGCCGCACCCTTGGAATTACCCGTT
GGCATTTTAACCGCCATGCTCGGCGGCCCATTCTTTTTGTATCTGCTCAAGCGGTCGCGAGGGATCAGGGACTAG

Upstream 100 bases:

>100_bases
TGTATCCAGAATTGTTTAACTAAGCCTGATTGAGCTTAATCAGCGTTTGCCAAGCAGCGTCAGCAATGGCGCTGCTTGCT
CCAGTTTTGAAGGGTTGGTT

Downstream 100 bases:

>100_bases
GCAGAAAGATGAAGGATGAGGGATGAGGGATGAAGCAAAAGTCAGACGAGGGCTATGGGCTTTTGGCTATAGGCTATTGG
GCAGTTTTTGTGGTTATGAG

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MARLISKPYWRDLLAFGGLLGLLLLTMVLSLGIGAVQFSPSEVLQAIIQPQHSSTNSTAVTIVWDLRLARMLLAALIGAG
LASAGAAFQGLFQNPLADPFAIGASGGAALGATLAIVLQIQWQWLGFSAVALCAFIGALLAVGVVYTIAEVGGQAPRTAL
LLAGAALSTMLSATVSLLLLMNEQPLYEVFAWLLGGLSGRSWDNLRSSLPFVVLGIAWLWLLARRIDALSCGDEVAQSLG
LSLWRTRSAVIAAASITTAATVANGGIIGFVGLIAPHIARLLFGANHARLIPASGLVGAMLLVLADTTARTIAAPLELPV
GILTAMLGGPFFLYLLKRSRGIRD

Sequences:

>Translated_344_residues
MARLISKPYWRDLLAFGGLLGLLLLTMVLSLGIGAVQFSPSEVLQAIIQPQHSSTNSTAVTIVWDLRLARMLLAALIGAG
LASAGAAFQGLFQNPLADPFAIGASGGAALGATLAIVLQIQWQWLGFSAVALCAFIGALLAVGVVYTIAEVGGQAPRTAL
LLAGAALSTMLSATVSLLLLMNEQPLYEVFAWLLGGLSGRSWDNLRSSLPFVVLGIAWLWLLARRIDALSCGDEVAQSLG
LSLWRTRSAVIAAASITTAATVANGGIIGFVGLIAPHIARLLFGANHARLIPASGLVGAMLLVLADTTARTIAAPLELPV
GILTAMLGGPFFLYLLKRSRGIRD
>Mature_343_residues
ARLISKPYWRDLLAFGGLLGLLLLTMVLSLGIGAVQFSPSEVLQAIIQPQHSSTNSTAVTIVWDLRLARMLLAALIGAGL
ASAGAAFQGLFQNPLADPFAIGASGGAALGATLAIVLQIQWQWLGFSAVALCAFIGALLAVGVVYTIAEVGGQAPRTALL
LAGAALSTMLSATVSLLLLMNEQPLYEVFAWLLGGLSGRSWDNLRSSLPFVVLGIAWLWLLARRIDALSCGDEVAQSLGL
SLWRTRSAVIAAASITTAATVANGGIIGFVGLIAPHIARLLFGANHARLIPASGLVGAMLLVLADTTARTIAAPLELPVG
ILTAMLGGPFFLYLLKRSRGIRD

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=279, Percent_Identity=37.9928315412186, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI1788004, Length=279, Percent_Identity=38.3512544802867, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1790741, Length=304, Percent_Identity=35.1973684210526, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1786805, Length=317, Percent_Identity=35.6466876971609, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1786804, Length=309, Percent_Identity=35.9223300970874, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1786347, Length=274, Percent_Identity=32.8467153284672, Blast_Score=104, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35799; Mature: 35668

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLISKPYWRDLLAFGGLLGLLLLTMVLSLGIGAVQFSPSEVLQAIIQPQHSSTNSTAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCCCCCCCEEE
TIVWDLRLARMLLAALIGAGLASAGAAFQGLFQNPLADPFAIGASGGAALGATLAIVLQI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHH
QWQWLGFSAVALCAFIGALLAVGVVYTIAEVGGQAPRTALLLAGAALSTMLSATVSLLLL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MNEQPLYEVFAWLLGGLSGRSWDNLRSSLPFVVLGIAWLWLLARRIDALSCGDEVAQSLG
HCCCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
LSLWRTRSAVIAAASITTAATVANGGIIGFVGLIAPHIARLLFGANHARLIPASGLVGAM
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH
LLVLADTTARTIAAPLELPVGILTAMLGGPFFLYLLKRSRGIRD
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARLISKPYWRDLLAFGGLLGLLLLTMVLSLGIGAVQFSPSEVLQAIIQPQHSSTNSTAV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCCCCCCCEEE
TIVWDLRLARMLLAALIGAGLASAGAAFQGLFQNPLADPFAIGASGGAALGATLAIVLQI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHH
QWQWLGFSAVALCAFIGALLAVGVVYTIAEVGGQAPRTALLLAGAALSTMLSATVSLLLL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MNEQPLYEVFAWLLGGLSGRSWDNLRSSLPFVVLGIAWLWLLARRIDALSCGDEVAQSLG
HCCCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
LSLWRTRSAVIAAASITTAATVANGGIIGFVGLIAPHIARLLFGANHARLIPASGLVGAM
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH
LLVLADTTARTIAAPLELPVGILTAMLGGPFFLYLLKRSRGIRD
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]