Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897557
Identifier: 159897557
GI number: 159897557
Start: 1173989
End: 1174765
Strand: Reverse
Name: 159897557
Synonym: Haur_1028
Alternate gene names: NA
Gene position: 1174765-1173989 (Counterclockwise)
Preceding gene: 159897558
Following gene: 159897556
Centisome position: 18.51
GC content: 50.19
Gene sequence:
>777_bases ATGTCGTGGAAAAGCCGAGTCCGGCCATTTATCCCCAAGCCAGTGTTGCAACGTTATATCGCTTGGCGCGTTGCCAATAA TCAAAAAACTGTGCGCCAACGCCTATTCGAGCAATATGGCCGCTACGCCGAATATACATTAACCCAACGCTCGCTACCTG AGCTATTTCCCGAAGGTCGTCAGGCCAGCATCGAAGTGCCAGTTGCGGCGATTGTGCGCGACGACACCATGGAAATGCCT TTGGCTGAATTGCTATCATTGGCGGGTGTGACCCAAATTAGCCAACCCAAAACTATTTTTGAATTTGGCACCTACATGGG CGCAACCACGCGCATGATGGCTCAGCATAGCAGCCCGGAAACCAAAATCTACACGCTTGACCTCGATGTCAAGACCCGCA ACGAGTATTTGCGGCGCAATGGCTATCAGTTTGAATTAAGCTTCACGCCAGGCCAACACTTTCACAATACCCCTGAGGCC AGCAAAATCACCCAGCTTTGGCTTGGTTTAGAGCCATTCGATTTTAGCCCATATTATGGCCAAATGGATTTAGTCTTGGT TGATGCTGATCATTCGTATCCCTTCGTTAAGGCTGATACCGAAGTGGCGCTGAAATTGGTGCGGCCTGGTGGAGTAGTTG TTTGGGATGATTATACTTGGGTCGATGCGCATCCTGAGTGTGTTGGGGTCACCCGCTGTGTCAACGAATTGGCTGAGCGC TTGCCGATTTACCGCATCAAACAAACTCGTTTAGCGATCTATCGAGTGCCTGCATGA
Upstream 100 bases:
>100_bases CCCTCGCCTCGCGTGCGGGAGAGGGGGCTAGGGGGTGAGGGTATGCACGTCATTGCCAACCAATTAACCATTACATGTAT TAATTATCAAAGGAACCGCT
Downstream 100 bases:
>100_bases AACGGCGACTCTGGTTCGTCACCGATAGCACAGCCCTTGGGGGAGCCGAGGGCTATTTAGAAACCCTGTTGCTCAATGCC GACCAACAGCAATTTGAACT
Product: O-methyltransferase family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSWKSRVRPFIPKPVLQRYIAWRVANNQKTVRQRLFEQYGRYAEYTLTQRSLPELFPEGRQASIEVPVAAIVRDDTMEMP LAELLSLAGVTQISQPKTIFEFGTYMGATTRMMAQHSSPETKIYTLDLDVKTRNEYLRRNGYQFELSFTPGQHFHNTPEA SKITQLWLGLEPFDFSPYYGQMDLVLVDADHSYPFVKADTEVALKLVRPGGVVVWDDYTWVDAHPECVGVTRCVNELAER LPIYRIKQTRLAIYRVPA
Sequences:
>Translated_258_residues MSWKSRVRPFIPKPVLQRYIAWRVANNQKTVRQRLFEQYGRYAEYTLTQRSLPELFPEGRQASIEVPVAAIVRDDTMEMP LAELLSLAGVTQISQPKTIFEFGTYMGATTRMMAQHSSPETKIYTLDLDVKTRNEYLRRNGYQFELSFTPGQHFHNTPEA SKITQLWLGLEPFDFSPYYGQMDLVLVDADHSYPFVKADTEVALKLVRPGGVVVWDDYTWVDAHPECVGVTRCVNELAER LPIYRIKQTRLAIYRVPA >Mature_257_residues SWKSRVRPFIPKPVLQRYIAWRVANNQKTVRQRLFEQYGRYAEYTLTQRSLPELFPEGRQASIEVPVAAIVRDDTMEMPL AELLSLAGVTQISQPKTIFEFGTYMGATTRMMAQHSSPETKIYTLDLDVKTRNEYLRRNGYQFELSFTPGQHFHNTPEAS KITQLWLGLEPFDFSPYYGQMDLVLVDADHSYPFVKADTEVALKLVRPGGVVVWDDYTWVDAHPECVGVTRCVNELAERL PIYRIKQTRLAIYRVPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29830; Mature: 29698
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWKSRVRPFIPKPVLQRYIAWRVANNQKTVRQRLFEQYGRYAEYTLTQRSLPELFPEGR CCCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEEECHHHHHHHCCCCC QASIEVPVAAIVRDDTMEMPLAELLSLAGVTQISQPKTIFEFGTYMGATTRMMAQHSSPE CCEEECCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCC TKIYTLDLDVKTRNEYLRRNGYQFELSFTPGQHFHNTPEASKITQLWLGLEPFDFSPYYG CEEEEEEEEEEHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC QMDLVLVDADHSYPFVKADTEVALKLVRPGGVVVWDDYTWVDAHPECVGVTRCVNELAER CEEEEEEECCCCCCEEECCHHHEEEEECCCCEEEECCEEEECCCCHHHHHHHHHHHHHHH LPIYRIKQTRLAIYRVPA CCEEEEECCEEEEEECCC >Mature Secondary Structure SWKSRVRPFIPKPVLQRYIAWRVANNQKTVRQRLFEQYGRYAEYTLTQRSLPELFPEGR CCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEEECHHHHHHHCCCCC QASIEVPVAAIVRDDTMEMPLAELLSLAGVTQISQPKTIFEFGTYMGATTRMMAQHSSPE CCEEECCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCC TKIYTLDLDVKTRNEYLRRNGYQFELSFTPGQHFHNTPEASKITQLWLGLEPFDFSPYYG CEEEEEEEEEEHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC QMDLVLVDADHSYPFVKADTEVALKLVRPGGVVVWDDYTWVDAHPECVGVTRCVNELAER CEEEEEEECCCCCCEEECCHHHEEEEECCCCEEEECCEEEECCCCHHHHHHHHHHHHHHH LPIYRIKQTRLAIYRVPA CCEEEEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA