Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897552

Identifier: 159897552

GI number: 159897552

Start: 1166937

End: 1168370

Strand: Reverse

Name: 159897552

Synonym: Haur_1023

Alternate gene names: NA

Gene position: 1168370-1166937 (Counterclockwise)

Preceding gene: 159897553

Following gene: 159897548

Centisome position: 18.41

GC content: 49.58

Gene sequence:

>1434_bases
ATGAAGATCACCACAAGTCAAGAGCTGATCGGCTGGCATCGGTATCTTGAGCAATTGGGTCCACGGCTGACTGGCAGTGA
GGCTCATCAGGCCTTTATCGAATTTTTAGCGACAGAATTAACCAGTTTGGGCTGTGAGGTTCAGCGTGATCGCTATTATT
TTACCCGTTGGCAAGCTCAAAACTGGAGTTTAGCGCTCCTCGATAGCGCTGGCAACGAAACGAGCATTCCCTGTAGCTTT
TATTACCCATATTCAGGCTCTACACCGCCTGAGGGCATCATTGGCGAGTTGGTGGATTGTGGCAAAAGCCCTGGCAATTT
TCAGCAAGCTGCTGGCAAAATTGCTTTGGTTGAAGTGGCAGTTCCGGCGTTACCAACCATGCTATTTCTGCACCCAACCA
AATTCGCCCAAGCCCAGAAATTGCCAAAACTGCTGCGAAACCCAACCCTTGGCTCGTTTTTGACTGGCCCAAATTTAGCC
GCCGCCAAACAAGCTGGAGTAAAAGGGGTAATTTGCATTTGGTCGAAAATCTCAGCGGCCAATGCCGATGCTCAATATTT
GCCCTTCACCACCAGCTATCAAGCTTGCCCAGCGCTTTGGGTCAACGCTGCGGTTGGTCAGCAACTCAAACAGGCAGTTG
GCCAAAAGATTCGCTTCACCCTCGAAGCAACGCTCACTGAGCAATGCCCAACTGATAGCTTGTATGTGGTTTTGCCAGGT
CAGCAATCCAACGAAAGCCTTTTGATTAATACTCATACCGATGGGCCGAACGCACCTGAGGAAAATGGCGCACTGGGCTT
GCTGGCATTAGTGCGTTGGTTCAAACAGCAGCAGCATCAACGGAATTTGATTTTTATTTTTGCCACAGGCCATTTTCAAT
TGCCGCAACTTGGCAAGCATGGCCAAGCTACCAGCACATGGCTCGCTGAGCACCCCGAATTGTGGAATGGCCAGCAAATG
CGGGCAATTGCAGGTGTGACCTTAGAGCATTTGGGCTGTACTGAATGGCTCGATAATCGGGCATTAAGCGATTATCAACC
AAGCCAGCAACCTGAACTTGAGCTAACCTACACCACCAGCCCAATGTTGGAGCAACTGTATTACACCGCGTTGTTGCAGC
GCACCAAACAGCGGGTACTCACGATTATGCCAATTAACGAGATTTATTTTGGCGAGGGCGAGCCATTCTACAAAGCCAAC
ATTCCGACAATTTCGCTGATTCCAGCGCCTAATTATCTATGTGCCACACCGAGCAACGCTGTAATCGATAAACTTGATTT
TGATTTGATGCAGCAACAAATCGAAACCTTCGCCCGCGTGATCAAGATGATCGATCAGATCAGCACTAGCCATTTGGGCG
TAGCTGAACCCCAGCCATTTAGCCTTGTTGGCAGTGTATTCCGCCGCATGGTTGGAGCCAATCAGCGGCACTAA

Upstream 100 bases:

>100_bases
TGATTGTCTCACAGTTGCGCAACGATTGGCATTGGCAGCGTAAAATTGTGGCAGAATTGAGCTGGTTGATTGAGAATCCT
GTGGTAGTGAGGTTGAATCA

Downstream 100 bases:

>100_bases
ATCACCACAGCCTCAAATTCGATCTGTTCAATTTCAAAGTAGGGGGCAAAGCAACAAACCCATGCTTGGCGCTTTGCCCC
TTGTTCATTTAATATATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKITTSQELIGWHRYLEQLGPRLTGSEAHQAFIEFLATELTSLGCEVQRDRYYFTRWQAQNWSLALLDSAGNETSIPCSF
YYPYSGSTPPEGIIGELVDCGKSPGNFQQAAGKIALVEVAVPALPTMLFLHPTKFAQAQKLPKLLRNPTLGSFLTGPNLA
AAKQAGVKGVICIWSKISAANADAQYLPFTTSYQACPALWVNAAVGQQLKQAVGQKIRFTLEATLTEQCPTDSLYVVLPG
QQSNESLLINTHTDGPNAPEENGALGLLALVRWFKQQQHQRNLIFIFATGHFQLPQLGKHGQATSTWLAEHPELWNGQQM
RAIAGVTLEHLGCTEWLDNRALSDYQPSQQPELELTYTTSPMLEQLYYTALLQRTKQRVLTIMPINEIYFGEGEPFYKAN
IPTISLIPAPNYLCATPSNAVIDKLDFDLMQQQIETFARVIKMIDQISTSHLGVAEPQPFSLVGSVFRRMVGANQRH

Sequences:

>Translated_477_residues
MKITTSQELIGWHRYLEQLGPRLTGSEAHQAFIEFLATELTSLGCEVQRDRYYFTRWQAQNWSLALLDSAGNETSIPCSF
YYPYSGSTPPEGIIGELVDCGKSPGNFQQAAGKIALVEVAVPALPTMLFLHPTKFAQAQKLPKLLRNPTLGSFLTGPNLA
AAKQAGVKGVICIWSKISAANADAQYLPFTTSYQACPALWVNAAVGQQLKQAVGQKIRFTLEATLTEQCPTDSLYVVLPG
QQSNESLLINTHTDGPNAPEENGALGLLALVRWFKQQQHQRNLIFIFATGHFQLPQLGKHGQATSTWLAEHPELWNGQQM
RAIAGVTLEHLGCTEWLDNRALSDYQPSQQPELELTYTTSPMLEQLYYTALLQRTKQRVLTIMPINEIYFGEGEPFYKAN
IPTISLIPAPNYLCATPSNAVIDKLDFDLMQQQIETFARVIKMIDQISTSHLGVAEPQPFSLVGSVFRRMVGANQRH
>Mature_477_residues
MKITTSQELIGWHRYLEQLGPRLTGSEAHQAFIEFLATELTSLGCEVQRDRYYFTRWQAQNWSLALLDSAGNETSIPCSF
YYPYSGSTPPEGIIGELVDCGKSPGNFQQAAGKIALVEVAVPALPTMLFLHPTKFAQAQKLPKLLRNPTLGSFLTGPNLA
AAKQAGVKGVICIWSKISAANADAQYLPFTTSYQACPALWVNAAVGQQLKQAVGQKIRFTLEATLTEQCPTDSLYVVLPG
QQSNESLLINTHTDGPNAPEENGALGLLALVRWFKQQQHQRNLIFIFATGHFQLPQLGKHGQATSTWLAEHPELWNGQQM
RAIAGVTLEHLGCTEWLDNRALSDYQPSQQPELELTYTTSPMLEQLYYTALLQRTKQRVLTIMPINEIYFGEGEPFYKAN
IPTISLIPAPNYLCATPSNAVIDKLDFDLMQQQIETFARVIKMIDQISTSHLGVAEPQPFSLVGSVFRRMVGANQRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52969; Mature: 52969

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITTSQELIGWHRYLEQLGPRLTGSEAHQAFIEFLATELTSLGCEVQRDRYYFTRWQAQ
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECC
NWSLALLDSAGNETSIPCSFYYPYSGSTPPEGIIGELVDCGKSPGNFQQAAGKIALVEVA
CCCEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCEEEEEEH
VPALPTMLFLHPTKFAQAQKLPKLLRNPTLGSFLTGPNLAAAKQAGVKGVICIWSKISAA
HHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEHHHCC
NADAQYLPFTTSYQACPALWVNAAVGQQLKQAVGQKIRFTLEATLTEQCPTDSLYVVLPG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEEEEECCCCCCCCEEEEECC
QQSNESLLINTHTDGPNAPEENGALGLLALVRWFKQQQHQRNLIFIFATGHFQLPQLGKH
CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCC
GQATSTWLAEHPELWNGQQMRAIAGVTLEHLGCTEWLDNRALSDYQPSQQPELELTYTTS
CCCHHHHHHCCCCCCCCCHHHHHHCCHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEECCC
PMLEQLYYTALLQRTKQRVLTIMPINEIYFGEGEPFYKANIPTISLIPAPNYLCATPSNA
HHHHHHHHHHHHHHHHHHEEEEEECCCEEECCCCCEEECCCCEEEEECCCCEEEECCCCH
VIDKLDFDLMQQQIETFARVIKMIDQISTSHLGVAEPQPFSLVGSVFRRMVGANQRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKITTSQELIGWHRYLEQLGPRLTGSEAHQAFIEFLATELTSLGCEVQRDRYYFTRWQAQ
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECC
NWSLALLDSAGNETSIPCSFYYPYSGSTPPEGIIGELVDCGKSPGNFQQAAGKIALVEVA
CCCEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCEEEEEEH
VPALPTMLFLHPTKFAQAQKLPKLLRNPTLGSFLTGPNLAAAKQAGVKGVICIWSKISAA
HHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEHHHCC
NADAQYLPFTTSYQACPALWVNAAVGQQLKQAVGQKIRFTLEATLTEQCPTDSLYVVLPG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEEEEECCCCCCCCEEEEECC
QQSNESLLINTHTDGPNAPEENGALGLLALVRWFKQQQHQRNLIFIFATGHFQLPQLGKH
CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCC
GQATSTWLAEHPELWNGQQMRAIAGVTLEHLGCTEWLDNRALSDYQPSQQPELELTYTTS
CCCHHHHHHCCCCCCCCCHHHHHHCCHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEECCC
PMLEQLYYTALLQRTKQRVLTIMPINEIYFGEGEPFYKANIPTISLIPAPNYLCATPSNA
HHHHHHHHHHHHHHHHHHEEEEEECCCEEECCCCCEEECCCCEEEEECCCCEEEECCCCH
VIDKLDFDLMQQQIETFARVIKMIDQISTSHLGVAEPQPFSLVGSVFRRMVGANQRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA