| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897548
Identifier: 159897548
GI number: 159897548
Start: 1165403
End: 1165894
Strand: Reverse
Name: 159897548
Synonym: Haur_1019
Alternate gene names: NA
Gene position: 1165894-1165403 (Counterclockwise)
Preceding gene: 159897552
Following gene: 159897541
Centisome position: 18.37
GC content: 49.59
Gene sequence:
>492_bases ATGAGCAATGAGCTATTTCTACGCCGCAAATGGACATTCAAGGCCCATGGTTCGCAGGTGGTGATGATCAAACGCCCAGT TGAATCGAGCGAACATGTGATGATGAAGGCATTAATTTGGGCGTTGTATTTGCCCAATTATCCTGAGGCACGGGTTGAAA CGCCAATCGGCTTGCGCTATAAGCCCGATGTGATTGCACTGGATTGCCAAGGGTTGCCGAGTTTTTGGGGCGAGGCTGGC CATGTGGGCATGGATAAGCTGGAAACCTTGCTCAAGCGCTATCGCCACACTCATTTTGTGTTTGCCAAATGGGATAGTAA TTTAGAAGCCTTAGCTCAGGTGGTTAGCGAATTGACCAGCAGCATCAAACGCTCAGCCCCGATTGATCTGCTTTCGATCC CGGCTGACAGTGGCGAGCGTTTCTTTGGCGCTGATGGCACAATTACGGTTGAGCATAGCCAGATTAATTATCGGCGTTTA ATGCAGCCATAA
Upstream 100 bases:
>100_bases AAATGGTAAAAACGAATCCATCATCAATCCTTTCAAACTCTCAGAACGTAGAATCGTTATACTATAGGCTGTACGTGCTG ATGCATGTGGAGTTGCAAAC
Downstream 100 bases:
>100_bases TTTGGCTAACGGTGTGTTCATGATCTTCGCCAGTGCAATCTACGGTGATATTGGCAAATTGGCGATACAGCGGCACGCGC TCGGCATATAAATCGGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSNELFLRRKWTFKAHGSQVVMIKRPVESSEHVMMKALIWALYLPNYPEARVETPIGLRYKPDVIALDCQGLPSFWGEAG HVGMDKLETLLKRYRHTHFVFAKWDSNLEALAQVVSELTSSIKRSAPIDLLSIPADSGERFFGADGTITVEHSQINYRRL MQP
Sequences:
>Translated_163_residues MSNELFLRRKWTFKAHGSQVVMIKRPVESSEHVMMKALIWALYLPNYPEARVETPIGLRYKPDVIALDCQGLPSFWGEAG HVGMDKLETLLKRYRHTHFVFAKWDSNLEALAQVVSELTSSIKRSAPIDLLSIPADSGERFFGADGTITVEHSQINYRRL MQP >Mature_162_residues SNELFLRRKWTFKAHGSQVVMIKRPVESSEHVMMKALIWALYLPNYPEARVETPIGLRYKPDVIALDCQGLPSFWGEAGH VGMDKLETLLKRYRHTHFVFAKWDSNLEALAQVVSELTSSIKRSAPIDLLSIPADSGERFFGADGTITVEHSQINYRRLM QP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18630; Mature: 18499
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNELFLRRKWTFKAHGSQVVMIKRPVESSEHVMMKALIWALYLPNYPEARVETPIGLRY CCCCEEEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE KPDVIALDCQGLPSFWGEAGHVGMDKLETLLKRYRHTHFVFAKWDSNLEALAQVVSELTS CCCEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHH SIKRSAPIDLLSIPADSGERFFGADGTITVEHSQINYRRLMQP HHHHCCCCEEEECCCCCCCEEECCCCEEEEEECCCCHHHCCCC >Mature Secondary Structure SNELFLRRKWTFKAHGSQVVMIKRPVESSEHVMMKALIWALYLPNYPEARVETPIGLRY CCCEEEEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE KPDVIALDCQGLPSFWGEAGHVGMDKLETLLKRYRHTHFVFAKWDSNLEALAQVVSELTS CCCEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHH SIKRSAPIDLLSIPADSGERFFGADGTITVEHSQINYRRLMQP HHHHCCCCEEEECCCCCCCEEECCCCEEEEEECCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA