| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is aroK [H]
Identifier: 159897547
GI number: 159897547
Start: 1164919
End: 1165431
Strand: Direct
Name: aroK [H]
Synonym: Haur_1018
Alternate gene names: 159897547
Gene position: 1164919-1165431 (Clockwise)
Preceding gene: 159897546
Following gene: 159897549
Centisome position: 18.36
GC content: 47.56
Gene sequence:
>513_bases ATGGCGCAGCATCGCAATGTGATTTTAATTGGCATGCCTGGATCGGGCAAAAGTACGCTGGGCATTTTATTAGCTAAAGC CTTAGTTTTTGATTTTATTGATACCGATGTGGTGATTCAAACCCGCCAGCATGGCCGCTTGATTGAGATTCTCGAACGGC TAGGCGCTGAGCAATTTTGTGCGGTCGAAAATCAATATTGCGCTGAGCTAGAGCTTGATCAATATGTGGTGGCGACTGGT GGCAGCGTGATTTATAGCCCCGATGCTATGGCCAATTTCCAGCGGCTTGGCACAATCGTCTATCTTTCAATCGCATTCGA TGAACTGTTGCCACGCATCACCGATATGGATTCGCGGGGAATTGTGATGCAGCCAGGCCAAAGTTTTGCCGATTTATATG CCGAGCGCGTGCCGCTGTATCGCCAATTTGCCAATATCACCGTAGATTGCACTGGCGAAGATCATGAACACACCGTTAGC CAAATTATGGCTGCATTAAACGCCGATAATTAA
Upstream 100 bases:
>100_bases TCGCACCGCGCCGATCTCTCCCTGATCGCGGTGCGAGCTTTTTTGTATTTACGCTGCTTGGCGTATAATACAGCCCACGC TTGTGTTTGGAGATTTGGCA
Downstream 100 bases:
>100_bases TCTGGCTATGCTCAACCGTAATTGTGCCATCAGCGCCAAAGAAACGCTCGCCACTGTCAGCCGGGATCGAAAGCAGATCA ATCGGGGCTGAGCGTTTGAT
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MAQHRNVILIGMPGSGKSTLGILLAKALVFDFIDTDVVIQTRQHGRLIEILERLGAEQFCAVENQYCAELELDQYVVATG GSVIYSPDAMANFQRLGTIVYLSIAFDELLPRITDMDSRGIVMQPGQSFADLYAERVPLYRQFANITVDCTGEDHEHTVS QIMAALNADN
Sequences:
>Translated_170_residues MAQHRNVILIGMPGSGKSTLGILLAKALVFDFIDTDVVIQTRQHGRLIEILERLGAEQFCAVENQYCAELELDQYVVATG GSVIYSPDAMANFQRLGTIVYLSIAFDELLPRITDMDSRGIVMQPGQSFADLYAERVPLYRQFANITVDCTGEDHEHTVS QIMAALNADN >Mature_169_residues AQHRNVILIGMPGSGKSTLGILLAKALVFDFIDTDVVIQTRQHGRLIEILERLGAEQFCAVENQYCAELELDQYVVATGG SVIYSPDAMANFQRLGTIVYLSIAFDELLPRITDMDSRGIVMQPGQSFADLYAERVPLYRQFANITVDCTGEDHEHTVSQ IMAALNADN
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=173, Percent_Identity=30.0578034682081, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786587, Length=165, Percent_Identity=32.1212121212121, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 18812; Mature: 18681
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQHRNVILIGMPGSGKSTLGILLAKALVFDFIDTDVVIQTRQHGRLIEILERLGAEQFC CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCHHHH AVENQYCAELELDQYVVATGGSVIYSPDAMANFQRLGTIVYLSIAFDELLPRITDMDSRG HHCCCHHCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IVMQPGQSFADLYAERVPLYRQFANITVDCTGEDHEHTVSQIMAALNADN EEECCCCHHHHHHHHHCHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure AQHRNVILIGMPGSGKSTLGILLAKALVFDFIDTDVVIQTRQHGRLIEILERLGAEQFC CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCHHHH AVENQYCAELELDQYVVATGGSVIYSPDAMANFQRLGTIVYLSIAFDELLPRITDMDSRG HHCCCHHCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IVMQPGQSFADLYAERVPLYRQFANITVDCTGEDHEHTVSQIMAALNADN EEECCCCHHHHHHHHHCHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA