| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897527
Identifier: 159897527
GI number: 159897527
Start: 1142241
End: 1142681
Strand: Reverse
Name: 159897527
Synonym: Haur_0998
Alternate gene names: NA
Gene position: 1142681-1142241 (Counterclockwise)
Preceding gene: 159897529
Following gene: 159897526
Centisome position: 18.0
GC content: 49.89
Gene sequence:
>441_bases ATGAGTTATCCACCGCCAACCGTGATCATCAACAATGGCAACGCTGGGCCTGGCTGCTTGATTCGCGGCTTGTGGTTTAT TTTTGTCGGTTTGTGGTTGGGAGCATTAGTCACTGGTGTAGCATGGTTCTTGATTGTCAGCATTATAGGCTTGCCACTAG GCCTGATGTTGCTCAATCGGCTGCCTCAAATGATGACCTTGCGCCCAAATCCCGCCAATGCCCAAATGGTGGTGCTCTCA AATGGACAGGTGGTCGTTGGCCACAGTCGCCCTCAACAATCCTTTATCATTCGGGCGATCTACTTTATTGTGGTTGGTTG GTGGTTTAGCGGCATTTGGCTAGCAACGGCTTGGGCAATCGCTGGCTTTAGTTTTGGCTTGGGCTTACCATTATCGTTTT GGATGTTCAACCGTGTGCCAGCGATTACAACCTTAGGCTAA
Upstream 100 bases:
>100_bases ATTAATCAAAATCCGATCTAGTTCAAGTACATAGCCCACATATGTGAACAGTGTATGGGGTATGCTACGCTCAAGCATCT AGAGTTAGAAAGGGAATCCA
Downstream 100 bases:
>100_bases GCGCGACCACTGCTGGTTTTAAGGCTTGCCCGCGTTACATCCAACTGTGGCACGGGCAAGTGATGCTGAATACAATACTG TTGCAAAGCCAGCAGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSYPPPTVIINNGNAGPGCLIRGLWFIFVGLWLGALVTGVAWFLIVSIIGLPLGLMLLNRLPQMMTLRPNPANAQMVVLS NGQVVVGHSRPQQSFIIRAIYFIVVGWWFSGIWLATAWAIAGFSFGLGLPLSFWMFNRVPAITTLG
Sequences:
>Translated_146_residues MSYPPPTVIINNGNAGPGCLIRGLWFIFVGLWLGALVTGVAWFLIVSIIGLPLGLMLLNRLPQMMTLRPNPANAQMVVLS NGQVVVGHSRPQQSFIIRAIYFIVVGWWFSGIWLATAWAIAGFSFGLGLPLSFWMFNRVPAITTLG >Mature_145_residues SYPPPTVIINNGNAGPGCLIRGLWFIFVGLWLGALVTGVAWFLIVSIIGLPLGLMLLNRLPQMMTLRPNPANAQMVVLSN GQVVVGHSRPQQSFIIRAIYFIVVGWWFSGIWLATAWAIAGFSFGLGLPLSFWMFNRVPAITTLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15970; Mature: 15839
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYPPPTVIINNGNAGPGCLIRGLWFIFVGLWLGALVTGVAWFLIVSIIGLPLGLMLLNR CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPQMMTLRPNPANAQMVVLSNGQVVVGHSRPQQSFIIRAIYFIVVGWWFSGIWLATAWAI CCHHEEECCCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFSFGLGLPLSFWMFNRVPAITTLG HHHHHCCCCHHHHHHHHCCCCEEECC >Mature Secondary Structure SYPPPTVIINNGNAGPGCLIRGLWFIFVGLWLGALVTGVAWFLIVSIIGLPLGLMLLNR CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPQMMTLRPNPANAQMVVLSNGQVVVGHSRPQQSFIIRAIYFIVVGWWFSGIWLATAWAI CCHHEEECCCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFSFGLGLPLSFWMFNRVPAITTLG HHHHHCCCCHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA