| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897526
Identifier: 159897526
GI number: 159897526
Start: 1140463
End: 1141755
Strand: Reverse
Name: 159897526
Synonym: Haur_0997
Alternate gene names: NA
Gene position: 1141755-1140463 (Counterclockwise)
Preceding gene: 159897527
Following gene: 159897525
Centisome position: 17.99
GC content: 52.28
Gene sequence:
>1293_bases ATGGATTCGTCGCTTTCAGCGATGCCTGTGCAAGCCCGCCAAGCTCGTTTGATTGAACACTATCAGACAGTGCGCCAATT CTCGGAGTATCTTTGTGAGCCGCTTGTAACCGAAGATTATGTGATTCAGTCGATGCCTGATGTTAGCCCAACCAAGTGGC ATCTTGCCCATACCAGTTGGTTTTTTGAAACGTTTGTACTGACCCAAGCCGTGCCCAACTACCAAACCTTACACCCTCAA TATGCTTACCTCTTTAATTCGTATTATGTAACGCTCGGCAAACGCCATTGTCGCCCCAAACGTGGCTTGATTTCGCGGCC AACCGTCGAGGAAACCTACCGCTACCGTGCCTATGTTGATCAGCAGATGTTGGCCTTGTTGATTGCGATGGATGCCGAAA CCTTTGCCCGTTGGGAGCCAATTCTCGATTTGGGGATTCATCACGAGCAGCAGCATCAAGAATTAATGTTGACTGACCTC AAGCATGTTTTTTCAGAAAACCCCTTGCGCCCAGCCTACCGTGAATTTGCCCCAAGCAACCAACAGCCTGCCGCACCATT GCGTTGGCTCAGCTATCCCGAAGGCATTGTTTGGCTTGGCTATGAAGGTCAAAGTTTTGCCTTCGATAATGAATCGCCGC GTCATCGCCAATTTGTACACAGTTTCAAATTGGCCTCACGGCTTGTCACCAACGGTGAATATTTGGCGTTTATCGAAGAT GCTGGCTATGCCCGCCAAGATTTGTGGCTCTCATCAGGCTGGTACACCCGCGAAGATGCTGGCTGGACTGCGCCGCTGTA TTGGGAGCAACTCGATGGGGTGTGGCAGCAGATGACGCTTGGTGGTTTGCGACCGCTTGATCTAGCCGAGCCTGTTTGTC ATCTCAGCTATTATGAAGCCGATGCTTTTGCCCGTTGGGCGGGCAAGCGCTTGCCCACCGAAGCCGAATGGGAGTTGGCA GCCCAAACCGTGCCGCTCGATGGATCATACGCTGATGCAGGCCGCTATCACCCAACAGCGCTCAATCTCGATAATAGCAC TTTGCCCCAACAAATGTTTGGCGAAGTTTGGCAATGGACCCAAAGTGCCTACTCGCCATATCCTGGGTTTCAGCCAGCAG CAGGCGCACTAGGCGAATACAATGGCAAATTTATGTCGGGGCAATATGTTTTGCGCGGCGCTTCATGTGCCACCTCGCGC TCCCATGCCCGCCTGACCTATCGCAATTTCTTCCCACCCGATGCCCGTTGGCAATTTAGTGGCTTGCGCTTGGCAGCAGA TGGTGAAGCATGA
Upstream 100 bases:
>100_bases CATGTTGGTTATCGACCAACTGACCTCTGTTCGTCACCCGCCGCCCTTGAGTGTGTGTACTTTGGGGCAATAGCAAAGGA TGCAGTCGATGGAGACACTG
Downstream 100 bases:
>100_bases GCGAAACTCAACAAGTAGCCAAAGTACGCTTGCTTGATGCCGCCCCCACCATAGCCTGCTTCCGCAGCGAAGTGCTTGAG GGCTTGCGTCAACCAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MDSSLSAMPVQARQARLIEHYQTVRQFSEYLCEPLVTEDYVIQSMPDVSPTKWHLAHTSWFFETFVLTQAVPNYQTLHPQ YAYLFNSYYVTLGKRHCRPKRGLISRPTVEETYRYRAYVDQQMLALLIAMDAETFARWEPILDLGIHHEQQHQELMLTDL KHVFSENPLRPAYREFAPSNQQPAAPLRWLSYPEGIVWLGYEGQSFAFDNESPRHRQFVHSFKLASRLVTNGEYLAFIED AGYARQDLWLSSGWYTREDAGWTAPLYWEQLDGVWQQMTLGGLRPLDLAEPVCHLSYYEADAFARWAGKRLPTEAEWELA AQTVPLDGSYADAGRYHPTALNLDNSTLPQQMFGEVWQWTQSAYSPYPGFQPAAGALGEYNGKFMSGQYVLRGASCATSR SHARLTYRNFFPPDARWQFSGLRLAADGEA
Sequences:
>Translated_430_residues MDSSLSAMPVQARQARLIEHYQTVRQFSEYLCEPLVTEDYVIQSMPDVSPTKWHLAHTSWFFETFVLTQAVPNYQTLHPQ YAYLFNSYYVTLGKRHCRPKRGLISRPTVEETYRYRAYVDQQMLALLIAMDAETFARWEPILDLGIHHEQQHQELMLTDL KHVFSENPLRPAYREFAPSNQQPAAPLRWLSYPEGIVWLGYEGQSFAFDNESPRHRQFVHSFKLASRLVTNGEYLAFIED AGYARQDLWLSSGWYTREDAGWTAPLYWEQLDGVWQQMTLGGLRPLDLAEPVCHLSYYEADAFARWAGKRLPTEAEWELA AQTVPLDGSYADAGRYHPTALNLDNSTLPQQMFGEVWQWTQSAYSPYPGFQPAAGALGEYNGKFMSGQYVLRGASCATSR SHARLTYRNFFPPDARWQFSGLRLAADGEA >Mature_430_residues MDSSLSAMPVQARQARLIEHYQTVRQFSEYLCEPLVTEDYVIQSMPDVSPTKWHLAHTSWFFETFVLTQAVPNYQTLHPQ YAYLFNSYYVTLGKRHCRPKRGLISRPTVEETYRYRAYVDQQMLALLIAMDAETFARWEPILDLGIHHEQQHQELMLTDL KHVFSENPLRPAYREFAPSNQQPAAPLRWLSYPEGIVWLGYEGQSFAFDNESPRHRQFVHSFKLASRLVTNGEYLAFIED AGYARQDLWLSSGWYTREDAGWTAPLYWEQLDGVWQQMTLGGLRPLDLAEPVCHLSYYEADAFARWAGKRLPTEAEWELA AQTVPLDGSYADAGRYHPTALNLDNSTLPQQMFGEVWQWTQSAYSPYPGFQPAAGALGEYNGKFMSGQYVLRGASCATSR SHARLTYRNFFPPDARWQFSGLRLAADGEA
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49521; Mature: 49521
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSSLSAMPVQARQARLIEHYQTVRQFSEYLCEPLVTEDYVIQSMPDVSPTKWHLAHTSW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEHHHHH FFETFVLTQAVPNYQTLHPQYAYLFNSYYVTLGKRHCRPKRGLISRPTVEETYRYRAYVD HHHHHHHHHCCCCCHHCCCHHHHHHHHHHEEECHHCCCCCCCCCCCCCHHHHHHHHHHHH QQMLALLIAMDAETFARWEPILDLGIHHEQQHQELMLTDLKHVFSENPLRPAYREFAPSN HHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC QQPAAPLRWLSYPEGIVWLGYEGQSFAFDNESPRHRQFVHSFKLASRLVTNGEYLAFIED CCCCCCHHHCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC AGYARQDLWLSSGWYTREDAGWTAPLYWEQLDGVWQQMTLGGLRPLDLAEPVCHLSYYEA CCCCHHHEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DAFARWAGKRLPTEAEWELAAQTVPLDGSYADAGRYHPTALNLDNSTLPQQMFGEVWQWT HHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHH QSAYSPYPGFQPAAGALGEYNGKFMSGQYVLRGASCATSRSHARLTYRNFFPPDARWQFS HHHCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCEEEECCCCCCCCCEEEC GLRLAADGEA CEEEECCCCC >Mature Secondary Structure MDSSLSAMPVQARQARLIEHYQTVRQFSEYLCEPLVTEDYVIQSMPDVSPTKWHLAHTSW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEHHHHH FFETFVLTQAVPNYQTLHPQYAYLFNSYYVTLGKRHCRPKRGLISRPTVEETYRYRAYVD HHHHHHHHHCCCCCHHCCCHHHHHHHHHHEEECHHCCCCCCCCCCCCCHHHHHHHHHHHH QQMLALLIAMDAETFARWEPILDLGIHHEQQHQELMLTDLKHVFSENPLRPAYREFAPSN HHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC QQPAAPLRWLSYPEGIVWLGYEGQSFAFDNESPRHRQFVHSFKLASRLVTNGEYLAFIED CCCCCCHHHCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC AGYARQDLWLSSGWYTREDAGWTAPLYWEQLDGVWQQMTLGGLRPLDLAEPVCHLSYYEA CCCCHHHEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DAFARWAGKRLPTEAEWELAAQTVPLDGSYADAGRYHPTALNLDNSTLPQQMFGEVWQWT HHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHH QSAYSPYPGFQPAAGALGEYNGKFMSGQYVLRGASCATSRSHARLTYRNFFPPDARWQFS HHHCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCEEEECCCCCCCCCEEEC GLRLAADGEA CEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA