Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897526

Identifier: 159897526

GI number: 159897526

Start: 1140463

End: 1141755

Strand: Reverse

Name: 159897526

Synonym: Haur_0997

Alternate gene names: NA

Gene position: 1141755-1140463 (Counterclockwise)

Preceding gene: 159897527

Following gene: 159897525

Centisome position: 17.99

GC content: 52.28

Gene sequence:

>1293_bases
ATGGATTCGTCGCTTTCAGCGATGCCTGTGCAAGCCCGCCAAGCTCGTTTGATTGAACACTATCAGACAGTGCGCCAATT
CTCGGAGTATCTTTGTGAGCCGCTTGTAACCGAAGATTATGTGATTCAGTCGATGCCTGATGTTAGCCCAACCAAGTGGC
ATCTTGCCCATACCAGTTGGTTTTTTGAAACGTTTGTACTGACCCAAGCCGTGCCCAACTACCAAACCTTACACCCTCAA
TATGCTTACCTCTTTAATTCGTATTATGTAACGCTCGGCAAACGCCATTGTCGCCCCAAACGTGGCTTGATTTCGCGGCC
AACCGTCGAGGAAACCTACCGCTACCGTGCCTATGTTGATCAGCAGATGTTGGCCTTGTTGATTGCGATGGATGCCGAAA
CCTTTGCCCGTTGGGAGCCAATTCTCGATTTGGGGATTCATCACGAGCAGCAGCATCAAGAATTAATGTTGACTGACCTC
AAGCATGTTTTTTCAGAAAACCCCTTGCGCCCAGCCTACCGTGAATTTGCCCCAAGCAACCAACAGCCTGCCGCACCATT
GCGTTGGCTCAGCTATCCCGAAGGCATTGTTTGGCTTGGCTATGAAGGTCAAAGTTTTGCCTTCGATAATGAATCGCCGC
GTCATCGCCAATTTGTACACAGTTTCAAATTGGCCTCACGGCTTGTCACCAACGGTGAATATTTGGCGTTTATCGAAGAT
GCTGGCTATGCCCGCCAAGATTTGTGGCTCTCATCAGGCTGGTACACCCGCGAAGATGCTGGCTGGACTGCGCCGCTGTA
TTGGGAGCAACTCGATGGGGTGTGGCAGCAGATGACGCTTGGTGGTTTGCGACCGCTTGATCTAGCCGAGCCTGTTTGTC
ATCTCAGCTATTATGAAGCCGATGCTTTTGCCCGTTGGGCGGGCAAGCGCTTGCCCACCGAAGCCGAATGGGAGTTGGCA
GCCCAAACCGTGCCGCTCGATGGATCATACGCTGATGCAGGCCGCTATCACCCAACAGCGCTCAATCTCGATAATAGCAC
TTTGCCCCAACAAATGTTTGGCGAAGTTTGGCAATGGACCCAAAGTGCCTACTCGCCATATCCTGGGTTTCAGCCAGCAG
CAGGCGCACTAGGCGAATACAATGGCAAATTTATGTCGGGGCAATATGTTTTGCGCGGCGCTTCATGTGCCACCTCGCGC
TCCCATGCCCGCCTGACCTATCGCAATTTCTTCCCACCCGATGCCCGTTGGCAATTTAGTGGCTTGCGCTTGGCAGCAGA
TGGTGAAGCATGA

Upstream 100 bases:

>100_bases
CATGTTGGTTATCGACCAACTGACCTCTGTTCGTCACCCGCCGCCCTTGAGTGTGTGTACTTTGGGGCAATAGCAAAGGA
TGCAGTCGATGGAGACACTG

Downstream 100 bases:

>100_bases
GCGAAACTCAACAAGTAGCCAAAGTACGCTTGCTTGATGCCGCCCCCACCATAGCCTGCTTCCGCAGCGAAGTGCTTGAG
GGCTTGCGTCAACCAATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MDSSLSAMPVQARQARLIEHYQTVRQFSEYLCEPLVTEDYVIQSMPDVSPTKWHLAHTSWFFETFVLTQAVPNYQTLHPQ
YAYLFNSYYVTLGKRHCRPKRGLISRPTVEETYRYRAYVDQQMLALLIAMDAETFARWEPILDLGIHHEQQHQELMLTDL
KHVFSENPLRPAYREFAPSNQQPAAPLRWLSYPEGIVWLGYEGQSFAFDNESPRHRQFVHSFKLASRLVTNGEYLAFIED
AGYARQDLWLSSGWYTREDAGWTAPLYWEQLDGVWQQMTLGGLRPLDLAEPVCHLSYYEADAFARWAGKRLPTEAEWELA
AQTVPLDGSYADAGRYHPTALNLDNSTLPQQMFGEVWQWTQSAYSPYPGFQPAAGALGEYNGKFMSGQYVLRGASCATSR
SHARLTYRNFFPPDARWQFSGLRLAADGEA

Sequences:

>Translated_430_residues
MDSSLSAMPVQARQARLIEHYQTVRQFSEYLCEPLVTEDYVIQSMPDVSPTKWHLAHTSWFFETFVLTQAVPNYQTLHPQ
YAYLFNSYYVTLGKRHCRPKRGLISRPTVEETYRYRAYVDQQMLALLIAMDAETFARWEPILDLGIHHEQQHQELMLTDL
KHVFSENPLRPAYREFAPSNQQPAAPLRWLSYPEGIVWLGYEGQSFAFDNESPRHRQFVHSFKLASRLVTNGEYLAFIED
AGYARQDLWLSSGWYTREDAGWTAPLYWEQLDGVWQQMTLGGLRPLDLAEPVCHLSYYEADAFARWAGKRLPTEAEWELA
AQTVPLDGSYADAGRYHPTALNLDNSTLPQQMFGEVWQWTQSAYSPYPGFQPAAGALGEYNGKFMSGQYVLRGASCATSR
SHARLTYRNFFPPDARWQFSGLRLAADGEA
>Mature_430_residues
MDSSLSAMPVQARQARLIEHYQTVRQFSEYLCEPLVTEDYVIQSMPDVSPTKWHLAHTSWFFETFVLTQAVPNYQTLHPQ
YAYLFNSYYVTLGKRHCRPKRGLISRPTVEETYRYRAYVDQQMLALLIAMDAETFARWEPILDLGIHHEQQHQELMLTDL
KHVFSENPLRPAYREFAPSNQQPAAPLRWLSYPEGIVWLGYEGQSFAFDNESPRHRQFVHSFKLASRLVTNGEYLAFIED
AGYARQDLWLSSGWYTREDAGWTAPLYWEQLDGVWQQMTLGGLRPLDLAEPVCHLSYYEADAFARWAGKRLPTEAEWELA
AQTVPLDGSYADAGRYHPTALNLDNSTLPQQMFGEVWQWTQSAYSPYPGFQPAAGALGEYNGKFMSGQYVLRGASCATSR
SHARLTYRNFFPPDARWQFSGLRLAADGEA

Specific function: Unknown

COG id: COG1262

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49521; Mature: 49521

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSLSAMPVQARQARLIEHYQTVRQFSEYLCEPLVTEDYVIQSMPDVSPTKWHLAHTSW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEHHHHH
FFETFVLTQAVPNYQTLHPQYAYLFNSYYVTLGKRHCRPKRGLISRPTVEETYRYRAYVD
HHHHHHHHHCCCCCHHCCCHHHHHHHHHHEEECHHCCCCCCCCCCCCCHHHHHHHHHHHH
QQMLALLIAMDAETFARWEPILDLGIHHEQQHQELMLTDLKHVFSENPLRPAYREFAPSN
HHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
QQPAAPLRWLSYPEGIVWLGYEGQSFAFDNESPRHRQFVHSFKLASRLVTNGEYLAFIED
CCCCCCHHHCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
AGYARQDLWLSSGWYTREDAGWTAPLYWEQLDGVWQQMTLGGLRPLDLAEPVCHLSYYEA
CCCCHHHEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DAFARWAGKRLPTEAEWELAAQTVPLDGSYADAGRYHPTALNLDNSTLPQQMFGEVWQWT
HHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHH
QSAYSPYPGFQPAAGALGEYNGKFMSGQYVLRGASCATSRSHARLTYRNFFPPDARWQFS
HHHCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCEEEECCCCCCCCCEEEC
GLRLAADGEA
CEEEECCCCC
>Mature Secondary Structure
MDSSLSAMPVQARQARLIEHYQTVRQFSEYLCEPLVTEDYVIQSMPDVSPTKWHLAHTSW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEHHHHH
FFETFVLTQAVPNYQTLHPQYAYLFNSYYVTLGKRHCRPKRGLISRPTVEETYRYRAYVD
HHHHHHHHHCCCCCHHCCCHHHHHHHHHHEEECHHCCCCCCCCCCCCCHHHHHHHHHHHH
QQMLALLIAMDAETFARWEPILDLGIHHEQQHQELMLTDLKHVFSENPLRPAYREFAPSN
HHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
QQPAAPLRWLSYPEGIVWLGYEGQSFAFDNESPRHRQFVHSFKLASRLVTNGEYLAFIED
CCCCCCHHHCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
AGYARQDLWLSSGWYTREDAGWTAPLYWEQLDGVWQQMTLGGLRPLDLAEPVCHLSYYEA
CCCCHHHEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DAFARWAGKRLPTEAEWELAAQTVPLDGSYADAGRYHPTALNLDNSTLPQQMFGEVWQWT
HHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHH
QSAYSPYPGFQPAAGALGEYNGKFMSGQYVLRGASCATSRSHARLTYRNFFPPDARWQFS
HHHCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCEEEECCCCCCCCCEEEC
GLRLAADGEA
CEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA