Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897520

Identifier: 159897520

GI number: 159897520

Start: 1136365

End: 1137405

Strand: Direct

Name: 159897520

Synonym: Haur_0991

Alternate gene names: NA

Gene position: 1136365-1137405 (Clockwise)

Preceding gene: 159897519

Following gene: 159897528

Centisome position: 17.91

GC content: 55.24

Gene sequence:

>1041_bases
ATGCTAAAGCCCCTCTACATTTCGCCGCTCGGCAAGGGCGGCGTTGATATTGGCATTCAAAATATCACCCGTTCGATGCA
ACGAGCTGGCCATCAACCAAGTTTACGCCGTTTATCGCACTTATTTAATTTTGCCCCGATGGCCGCGAAATTGGCGCTGG
GCCGCAATTGGTGGCAAGGCCATGATCTGGTTCAGGCGCGTTCACGCTGCGCATGGGCGTTACGCGCACCTGGTTTGCCA
TTGGTGACGACGGTGCATCACATCGTGACCGACCCATTGCTTCAGCCCTATAGCTCACCGCAACAACGCTTGTTTTATCG
CTTGGTTGAAAAAACCTACGATGGCTTATCGGTACGCTTGGCTGATGAAGTGATTTGTGTCAGCCGTTACACGCAGGAGC
AAACCCGCCTGACCTACGGCGACCGCCCGACCACCGTGATTTACGATGGGATTGATACCGAAGTTTTTACCCCAGCCCCA
GATTTTCAGCGCACCAACGATTTGCCTGAGCATCCCGCACCGATTCGTTTGCTGTTTGTTGGCAATCGCACGCGGCGCAA
AGGCTTTGATCTGCTGCCAAAAATTATGGATCAACTGGGGCCGCAGTATGTGCTGTATTACACCGAGTCGTTTCAAGGGG
TGCAGGCAGCGCCGCCGCATCCGCAGATGGTGCGGATTGGCACGCCCGACCGTGATGGTTTGATTGCGGCCTATCGTTCC
TGTGATGTATTGTTGTTTCCGGCGCGAGTTGAAGGCTTTGGAATTGTTGCAGCCGAGGCGGGAGCTTGTGGCAAGCCTGT
CATTACCACCAACGCCTCAGCGCTGCCCGAAGTGGTTAATCATGGCGAAACGGGGCTGCTCTGCGAATTGGATAATGTCC
AAGCCTTTGTTCAAGCCATCCAAGAGTTGGGCGAAGATCCAGCACGGCGTTTGCAGATGGGCCAAGCCGCCCGCGAACGC
GTGGCCAGCAATTTTGGCTACGATGTCTTGGCGCGAGAACTAGCGGCGGTTTACCGTCGCGCCTTATTTGGCACTGCCTA
G

Upstream 100 bases:

>100_bases
ATATCGGCACTGATGCTAGTGGTATCCGCTACGAAGTAACAATTCGCGCCTCGGTTGCCATTCCTAAGCCCTAATCCGCA
CGAGGAAGTTGCAGACATTT

Downstream 100 bases:

>100_bases
TTAAGCGTATGAATCAAGGGTTTCGCTCTTATTGCAAAACCCTTGATTTAGATTTCATCACTGAATTATTTCAAGCCATT
AATTGCCTTTTTAGGGGGTG

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MLKPLYISPLGKGGVDIGIQNITRSMQRAGHQPSLRRLSHLFNFAPMAAKLALGRNWWQGHDLVQARSRCAWALRAPGLP
LVTTVHHIVTDPLLQPYSSPQQRLFYRLVEKTYDGLSVRLADEVICVSRYTQEQTRLTYGDRPTTVIYDGIDTEVFTPAP
DFQRTNDLPEHPAPIRLLFVGNRTRRKGFDLLPKIMDQLGPQYVLYYTESFQGVQAAPPHPQMVRIGTPDRDGLIAAYRS
CDVLLFPARVEGFGIVAAEAGACGKPVITTNASALPEVVNHGETGLLCELDNVQAFVQAIQELGEDPARRLQMGQAARER
VASNFGYDVLARELAAVYRRALFGTA

Sequences:

>Translated_346_residues
MLKPLYISPLGKGGVDIGIQNITRSMQRAGHQPSLRRLSHLFNFAPMAAKLALGRNWWQGHDLVQARSRCAWALRAPGLP
LVTTVHHIVTDPLLQPYSSPQQRLFYRLVEKTYDGLSVRLADEVICVSRYTQEQTRLTYGDRPTTVIYDGIDTEVFTPAP
DFQRTNDLPEHPAPIRLLFVGNRTRRKGFDLLPKIMDQLGPQYVLYYTESFQGVQAAPPHPQMVRIGTPDRDGLIAAYRS
CDVLLFPARVEGFGIVAAEAGACGKPVITTNASALPEVVNHGETGLLCELDNVQAFVQAIQELGEDPARRLQMGQAARER
VASNFGYDVLARELAAVYRRALFGTA
>Mature_346_residues
MLKPLYISPLGKGGVDIGIQNITRSMQRAGHQPSLRRLSHLFNFAPMAAKLALGRNWWQGHDLVQARSRCAWALRAPGLP
LVTTVHHIVTDPLLQPYSSPQQRLFYRLVEKTYDGLSVRLADEVICVSRYTQEQTRLTYGDRPTTVIYDGIDTEVFTPAP
DFQRTNDLPEHPAPIRLLFVGNRTRRKGFDLLPKIMDQLGPQYVLYYTESFQGVQAAPPHPQMVRIGTPDRDGLIAAYRS
CDVLLFPARVEGFGIVAAEAGACGKPVITTNASALPEVVNHGETGLLCELDNVQAFVQAIQELGEDPARRLQMGQAARER
VASNFGYDVLARELAAVYRRALFGTA

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI32564184, Length=271, Percent_Identity=25.4612546125461, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 38435; Mature: 38435

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPLYISPLGKGGVDIGIQNITRSMQRAGHQPSLRRLSHLFNFAPMAAKLALGRNWWQG
CCCCCEECCCCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HDLVQARSRCAWALRAPGLPLVTTVHHIVTDPLLQPYSSPQQRLFYRLVEKTYDGLSVRL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEE
ADEVICVSRYTQEQTRLTYGDRPTTVIYDGIDTEVFTPAPDFQRTNDLPEHPAPIRLLFV
HHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCEEEEEE
GNRTRRKGFDLLPKIMDQLGPQYVLYYTESFQGVQAAPPHPQMVRIGTPDRDGLIAAYRS
CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHCCC
CDVLLFPARVEGFGIVAAEAGACGKPVITTNASALPEVVNHGETGLLCELDNVQAFVQAI
CCEEEEECEECCCEEEEECCCCCCCCEEECCHHHHHHHHCCCCCCEEEEHHHHHHHHHHH
QELGEDPARRLQMGQAARERVASNFGYDVLARELAAVYRRALFGTA
HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKPLYISPLGKGGVDIGIQNITRSMQRAGHQPSLRRLSHLFNFAPMAAKLALGRNWWQG
CCCCCEECCCCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HDLVQARSRCAWALRAPGLPLVTTVHHIVTDPLLQPYSSPQQRLFYRLVEKTYDGLSVRL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEE
ADEVICVSRYTQEQTRLTYGDRPTTVIYDGIDTEVFTPAPDFQRTNDLPEHPAPIRLLFV
HHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCEEEEEE
GNRTRRKGFDLLPKIMDQLGPQYVLYYTESFQGVQAAPPHPQMVRIGTPDRDGLIAAYRS
CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHCCC
CDVLLFPARVEGFGIVAAEAGACGKPVITTNASALPEVVNHGETGLLCELDNVQAFVQAI
CCEEEEECEECCCEEEEECCCCCCCCEEECCHHHHHHHHCCCCCCEEEEHHHHHHHHHHH
QELGEDPARRLQMGQAARERVASNFGYDVLARELAAVYRRALFGTA
HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]