| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is pksS [H]
Identifier: 159897502
GI number: 159897502
Start: 1115891
End: 1117129
Strand: Direct
Name: pksS [H]
Synonym: Haur_0973
Alternate gene names: 159897502
Gene position: 1115891-1117129 (Clockwise)
Preceding gene: 159897501
Following gene: 159897503
Centisome position: 17.58
GC content: 53.03
Gene sequence:
>1239_bases ATGACACAATCACAAGTGCACATATATGCCGATGATCCAACGGCGCAGATTTTTCAGTCCAGCGCAATTGAAAATCCGTA TCCGTTGTTTGCCCAAATGCGGGCCAAAGCGGCGGTGCTGGCGGTTCCCTCGCCCTATGAATTTGTCAAAGCCGATGCGT GGCTGGTAACGCGCTATGCCGAAGCAGTCCAAGTATTAAAGGATAGCCGCTTCACGGTCGATGCAACGATCCTCAACCCT GAGGCTGGCGTATTTGGCCAAACTGCCTCGGAAGGAGCCGAAGATCGCAGCTTCTTGGGCGCAAAATCGATGGTTAGCGC CGATGGAGCCGAACACTCGCGCTTACGCAGTTTGGTGGCCAAAGCCTTTACCCCGCGCTATATCGAACAGCTGCGCCCAC GCATCCAAGAGCTTGCCGATGAATTGCTTGATCAGGTGCAGGCTCACGGCACGATGGATTTGGTGCAAGATTACGCCTAT CCTTTGCCAATTAACGTTATCTCCGAAATGCTGGGCGTACCAACCCATGAACGCGACCAGATGCGCGAATGGTCGGACGC ATTGACCAGCCATAGCCCTGAAAGCCAAGGCCAGTTGCGCGAATTTGCCATGTATGTGCAAAAGCTGATCGCTGATAAAC GCCGCAATCCGCAAGCTGATCTGATTAGTAAATTGGTCGAGTTGGAAGCCACAGGCGATGCCCTCAGCGAATCAGAATTA TTGGCAACCGCAGGCTTGTTAATTTTTGCGGGCCACGAAACCACCTCGAATTTAATCAGCATTGGCTCGTTGATGTTGCT TGATCATCCTGAGCAACGCGCTCGCTTGCAAGCCGATCCCAGCCTTATTCCAACAGCCGTCGAAGAATTATTGCGCTTCA ATGGGCCAATCTTTAGCCCTGCCCCACGTTTTGCGCTCGAAGATGTGGAGATCGCAGGTCAGCCGATTCGCCGTGGCGAT TTGGTGTTGGTGGCGCTTGGCTCGGCCAACCACGATCAAAGCGTTTTCAACGATCCTGAATCATTGGATGTGGCGCGTGA AATTAGCCGCCAACTCGCTTTTGGCCATGGCGTGCACTTCTGTTTGGGTGCGCCGCTCGCTCGCTTAGAAGCTGAAATCG CTTTCACCAGCTTATTGAAACGCATGCCCAACTTACAGTTAGCTGTGCCACGCGAACACATTCAGTGGCGCGATAACGTG AATTTACGGGGTCTCAAAGCCCTCCCTGTGATCTTCTAG
Upstream 100 bases:
>100_bases GCCCTGCCGACTTGATTCCCCATATTAGCCAGATCTTCTTTCGCGGCATTGTCGCACCAACTGGAAGTTAAGTTAATTGA TAGCAAGGAATCATACAACA
Downstream 100 bases:
>100_bases ATCACTTTTTCGATCAACCATTCATTCTTACCACAGGAGTCGATCAATGCGTTTACACGACAACGTTGTCATCATTACCG GAGCCGCCTCAGGGATGGGC
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MTQSQVHIYADDPTAQIFQSSAIENPYPLFAQMRAKAAVLAVPSPYEFVKADAWLVTRYAEAVQVLKDSRFTVDATILNP EAGVFGQTASEGAEDRSFLGAKSMVSADGAEHSRLRSLVAKAFTPRYIEQLRPRIQELADELLDQVQAHGTMDLVQDYAY PLPINVISEMLGVPTHERDQMREWSDALTSHSPESQGQLREFAMYVQKLIADKRRNPQADLISKLVELEATGDALSESEL LATAGLLIFAGHETTSNLISIGSLMLLDHPEQRARLQADPSLIPTAVEELLRFNGPIFSPAPRFALEDVEIAGQPIRRGD LVLVALGSANHDQSVFNDPESLDVAREISRQLAFGHGVHFCLGAPLARLEAEIAFTSLLKRMPNLQLAVPREHIQWRDNV NLRGLKALPVIF
Sequences:
>Translated_412_residues MTQSQVHIYADDPTAQIFQSSAIENPYPLFAQMRAKAAVLAVPSPYEFVKADAWLVTRYAEAVQVLKDSRFTVDATILNP EAGVFGQTASEGAEDRSFLGAKSMVSADGAEHSRLRSLVAKAFTPRYIEQLRPRIQELADELLDQVQAHGTMDLVQDYAY PLPINVISEMLGVPTHERDQMREWSDALTSHSPESQGQLREFAMYVQKLIADKRRNPQADLISKLVELEATGDALSESEL LATAGLLIFAGHETTSNLISIGSLMLLDHPEQRARLQADPSLIPTAVEELLRFNGPIFSPAPRFALEDVEIAGQPIRRGD LVLVALGSANHDQSVFNDPESLDVAREISRQLAFGHGVHFCLGAPLARLEAEIAFTSLLKRMPNLQLAVPREHIQWRDNV NLRGLKALPVIF >Mature_411_residues TQSQVHIYADDPTAQIFQSSAIENPYPLFAQMRAKAAVLAVPSPYEFVKADAWLVTRYAEAVQVLKDSRFTVDATILNPE AGVFGQTASEGAEDRSFLGAKSMVSADGAEHSRLRSLVAKAFTPRYIEQLRPRIQELADELLDQVQAHGTMDLVQDYAYP LPINVISEMLGVPTHERDQMREWSDALTSHSPESQGQLREFAMYVQKLIADKRRNPQADLISKLVELEATGDALSESELL ATAGLLIFAGHETTSNLISIGSLMLLDHPEQRARLQADPSLIPTAVEELLRFNGPIFSPAPRFALEDVEIAGQPIRRGDL VLVALGSANHDQSVFNDPESLDVAREISRQLAFGHGVHFCLGAPLARLEAEIAFTSLLKRMPNLQLAVPREHIQWRDNVN LRGLKALPVIF
Specific function: Involved in the metabolism of the antibiotic polyketide bacillaene which is involved in secondary metabolism. The substrate is dihydrobacillaene [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI310125128, Length=178, Percent_Identity=32.0224719101124, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI14550409, Length=178, Percent_Identity=32.0224719101124, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI310125130, Length=178, Percent_Identity=32.0224719101124, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI190570174, Length=178, Percent_Identity=32.0224719101124, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45547; Mature: 45416
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSQVHIYADDPTAQIFQSSAIENPYPLFAQMRAKAAVLAVPSPYEFVKADAWLVTRYA CCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHH EAVQVLKDSRFTVDATILNPEAGVFGQTASEGAEDRSFLGAKSMVSADGAEHSRLRSLVA HHHHHHHCCCEEEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH KAFTPRYIEQLRPRIQELADELLDQVQAHGTMDLVQDYAYPLPINVISEMLGVPTHERDQ HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCCCCHHH MREWSDALTSHSPESQGQLREFAMYVQKLIADKRRNPQADLISKLVELEATGDALSESEL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHH LATAGLLIFAGHETTSNLISIGSLMLLDHPEQRARLQADPSLIPTAVEELLRFNGPIFSP HHHHCEEEEECCCCHHHHHHHHHHHEECCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC APRFALEDVEIAGQPIRRGDLVLVALGSANHDQSVFNDPESLDVAREISRQLAFGHGVHF CCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHH CLGAPLARLEAEIAFTSLLKRMPNLQLAVPREHIQWRDNVNLRGLKALPVIF HHCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQSQVHIYADDPTAQIFQSSAIENPYPLFAQMRAKAAVLAVPSPYEFVKADAWLVTRYA CCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHH EAVQVLKDSRFTVDATILNPEAGVFGQTASEGAEDRSFLGAKSMVSADGAEHSRLRSLVA HHHHHHHCCCEEEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH KAFTPRYIEQLRPRIQELADELLDQVQAHGTMDLVQDYAYPLPINVISEMLGVPTHERDQ HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCCCCHHH MREWSDALTSHSPESQGQLREFAMYVQKLIADKRRNPQADLISKLVELEATGDALSESEL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHH LATAGLLIFAGHETTSNLISIGSLMLLDHPEQRARLQADPSLIPTAVEELLRFNGPIFSP HHHHCEEEEECCCCHHHHHHHHHHHEECCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC APRFALEDVEIAGQPIRRGDLVLVALGSANHDQSVFNDPESLDVAREISRQLAFGHGVHF CCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHH CLGAPLARLEAEIAFTSLLKRMPNLQLAVPREHIQWRDNVNLRGLKALPVIF HHCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]