| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yxeH [H]
Identifier: 159897480
GI number: 159897480
Start: 1091216
End: 1092022
Strand: Reverse
Name: yxeH [H]
Synonym: Haur_0951
Alternate gene names: 159897480
Gene position: 1092022-1091216 (Counterclockwise)
Preceding gene: 159897481
Following gene: 159897479
Centisome position: 17.21
GC content: 53.41
Gene sequence:
>807_bases ATGCCAATTCGAATGATTGCAACCGATATTGACCTTACCCTGCTTGATGACCGCGGCCAATTGCCCCCGACCAATATCGA GGCGTTGGCCTTGGCTGCTCGTCAAGGGATTCGCGTGGTTTTAGCCACTGCCCGCCGTCGTGAAGCTGCCCAAGAAGTTG CCCAGCGTTTGCATATTCCAACTGCGCTGGTTTGCCATAATGGCGCGCGTATTTGGGATGAACGTGGGCGCGAAATTGCC CATCACACCATCGATTTGGAGTTGGCTCAGCGCATCGCGGCCATGGCCGATAAACGCAGTTTACCAGTGGTTTTCACGAT TGATGAAACTAACTTTGTCACGGCCCAAGCCAGCAATTTAGTCGGCTCGCGTACCGTTTGTACGCCTGTATCATCACTTG AATTGATTGTGCGGCTGGCTCCCACCCGTATTTTATGCCATGGCGAGCTGGCAACCCGCGCAGTTGAAGAGATTTTGGGG CGTAATTCACAATTAAAGCAATTTCGCTATTTGCGCAGCACTGGTGAAGTTTATTCAGCAGTTATTTCGCATGCCGAGGC CACCAAAGAACGGGCCTTGGAACATCTCTGTCAGGCATGGAGTATTCAGCAAAGCGAGGTGCTAGCAATTGGCGATGCTG ATGCTGATGTCGGGATGTTGCGCTGGGCTGGCGTTGGGGTTTCACTAACTGGCAGTATGCAGCAGGCCATCGAGGCCGCC GATTGGGTTGCACCTTCGGCGCGTTTCGGCGGAGTCGCCGTCGCGGTGCATCGTTATGTCTTACAACATCAAAATGTCCG TTCCTAG
Upstream 100 bases:
>100_bases AAACACACGGCTATCACATCGAGCGTTTTGGCCAGCGTGTGTGGCCGGTGTAATCGATGGTTGATGCGAATGCTCGCATG AACTATCTACGGTAGGGCTT
Downstream 100 bases:
>100_bases GGTAAGGATGTATGCAAAAGCTATTAATTGGTTCAAATAATGCCCATAAAGTCGGTGAACTGCGGGCAATTTTCAGTGGC TTGCCCTTTGAATTGCTAAC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MPIRMIATDIDLTLLDDRGQLPPTNIEALALAARQGIRVVLATARRREAAQEVAQRLHIPTALVCHNGARIWDERGREIA HHTIDLELAQRIAAMADKRSLPVVFTIDETNFVTAQASNLVGSRTVCTPVSSLELIVRLAPTRILCHGELATRAVEEILG RNSQLKQFRYLRSTGEVYSAVISHAEATKERALEHLCQAWSIQQSEVLAIGDADADVGMLRWAGVGVSLTGSMQQAIEAA DWVAPSARFGGVAVAVHRYVLQHQNVRS
Sequences:
>Translated_268_residues MPIRMIATDIDLTLLDDRGQLPPTNIEALALAARQGIRVVLATARRREAAQEVAQRLHIPTALVCHNGARIWDERGREIA HHTIDLELAQRIAAMADKRSLPVVFTIDETNFVTAQASNLVGSRTVCTPVSSLELIVRLAPTRILCHGELATRAVEEILG RNSQLKQFRYLRSTGEVYSAVISHAEATKERALEHLCQAWSIQQSEVLAIGDADADVGMLRWAGVGVSLTGSMQQAIEAA DWVAPSARFGGVAVAVHRYVLQHQNVRS >Mature_267_residues PIRMIATDIDLTLLDDRGQLPPTNIEALALAARQGIRVVLATARRREAAQEVAQRLHIPTALVCHNGARIWDERGREIAH HTIDLELAQRIAAMADKRSLPVVFTIDETNFVTAQASNLVGSRTVCTPVSSLELIVRLAPTRILCHGELATRAVEEILGR NSQLKQFRYLRSTGEVYSAVISHAEATKERALEHLCQAWSIQQSEVLAIGDADADVGMLRWAGVGVSLTGSMQQAIEAAD WVAPSARFGGVAVAVHRYVLQHQNVRS
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 - InterPro: IPR006380 [H]
Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]
EC number: NA
Molecular weight: Translated: 29345; Mature: 29214
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRMIATDIDLTLLDDRGQLPPTNIEALALAARQGIRVVLATARRREAAQEVAQRLHIP CCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCC TALVCHNGARIWDERGREIAHHTIDLELAQRIAAMADKRSLPVVFTIDETNFVTAQASNL EEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEHHHC VGSRTVCTPVSSLELIVRLAPTRILCHGELATRAVEEILGRNSQLKQFRYLRSTGEVYSA CCCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VISHAEATKERALEHLCQAWSIQQSEVLAIGDADADVGMLRWAGVGVSLTGSMQQAIEAA HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHEEECCCEEECCHHHHHHHHH DWVAPSARFGGVAVAVHRYVLQHQNVRS HHCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PIRMIATDIDLTLLDDRGQLPPTNIEALALAARQGIRVVLATARRREAAQEVAQRLHIP CCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCC TALVCHNGARIWDERGREIAHHTIDLELAQRIAAMADKRSLPVVFTIDETNFVTAQASNL EEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEHHHC VGSRTVCTPVSSLELIVRLAPTRILCHGELATRAVEEILGRNSQLKQFRYLRSTGEVYSA CCCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VISHAEATKERALEHLCQAWSIQQSEVLAIGDADADVGMLRWAGVGVSLTGSMQQAIEAA HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHEEECCCEEECCHHHHHHHHH DWVAPSARFGGVAVAVHRYVLQHQNVRS HHCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]