| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is malT [C]
Identifier: 159897476
GI number: 159897476
Start: 1083750
End: 1086149
Strand: Reverse
Name: malT [C]
Synonym: Haur_0947
Alternate gene names: 159897476
Gene position: 1086149-1083750 (Counterclockwise)
Preceding gene: 159897479
Following gene: 159897475
Centisome position: 17.11
GC content: 51.83
Gene sequence:
>2400_bases ATGGGAATTCCACGCCATATTCCATTACCAGTTACACCGCTGCTTGGCCGCATCCAAGAAATGGCGCAACTTGAGCAGCT TTTGCCCGATCCCACAATTCGTCTTGTTACCTTGGTTGGGCCTGGTGGCGCGGGCAAGACGCGCTTAGCACTCGAAGCAG GCCGCACAGTCTGCGAGCAATTTGCCGATGGCGCGTTATTTGTCAGTTTGGCCCATGTCTATGATGTTGATCTGGTGCTA CCAACCCTAGCCCAAGCCTTCAACCTCAGTCGGCTGGGCAATCAGTCGCTCTTGGCCAGCGTTGGGGCGTGGCTAGCCGA CCAAGAATTATTGCTGATTTTAGATAATTTGGAGCAGGTGATCGATGTTGCCGCCTTGTTGGTGCAGCTGTTGGCCTTGG CTCCCAAATTAACCTTGTTGGTGACCAGCCGCGAAGTATTAAATGTGCAGGGCGAATATCGCTTGCCAGTGCCACCGCTC AGCCTGCCACCCAGCAGCCAACCCATGGCAATCGAGCAATTAAGTGAATTTAGCGCAACCCGCTTATTTATTGAACGAGC CAAAGCTGCTCGCCCCCACATTCCACTAAATGCCAATGATGCCCAAAGTATTGCCACAATTTGTCAGCGCCTCGATGGCT TGCCCTTGGCGATTGAGTTGGTTGCGGCCTATACCAAGGTTTTTACCCCGCAAGAATTATTAACCCGCTTCAGTTATAGC CTCGATGTGCCAGTTGGCGGCGCACGCGATTTGCCCAACCGCCAGCAAACGTTGCGCCAATGCATCGATTGGAGCTACCA ACGTTTGACTCCTGAGGAACAAACGGTTTTTTGTTATCTCAGTGTACTCGTTAGTAGCTGGACGATGGCTGCCGTTGAGC AAATTTGCGCAGGTCAGGCTAATGTCGTAGCAACCGTTTTAGCCTTGGTCAATAAAAGTTTGGTAGTCGAGCAAACCACC CACGATGGCCAAACTCGCTTTACCATGTTACATACCATCGCTGAATTTGCCCGTGAGCAAGCAGTGCTACGCGAGGATTT TCAAACGATCTGCCAACGCCATGCCAGTTATTATTTGCAGATGGTCGCCCAAGCCGCGCCGCATTTGCGCGATCAGCAAC AAGCGCTTTGGTTACGTCAACTTGATGCCGAGCAAGGCAATATTTATGCAGCTCTCCAATGGACGCTTGATCATGCCGTG GTTGAATCAATTGAACTCTTTCCATCAATTAATCTGTGGATCACCTATCGCCGTCGTCATGGCGATGTTTGGTGGATAGG GCGCATGCTTGAGGCTAGCAGTAACATCCGCTCAGGCGCACGGGTCGAAACGCTTTCCACGGCGGGCTGGTTTATTCTCA ATCAAGGCTTATTTGCCCAAGCCGAAACAATTTTTGAGCAGGCGTTGAGCCTCGCCCGCGATTTGCAAATTCCCATGAGC ATTGGCTTGGCCCTGCATGGCGTTGGCGAAATTGCCTATCATCGCGGCGATTATGCCCAAGCAATCACGCTCTACGAGGA AAGTGTGCAAATTTTCGAGCAGCTTGATGATCATAATGAATTGGCTTGGTCGCTTGATCATTTGGGGCGGGCGTGTATTC AGCAAGGTCAATGGAAACGCGCTGCGCTGTTGTTTGCTCGTGCTCATCAGCTTTTTGCGCGCTTGGGTCATTTGTGGGGC GATGCCTTTGCGCTCAATCATTGTGGCATCGTCGCCGCCGCCCAACAAGATTATGATCAAGCTCAACATTTTATCGAAGC CAGCATTGCAATCGCTGAGCAATTGCACGATCCATGGCATCGCGCCGAGGGCTTGCATCAATTAGGATTAATCGCTTTGG CCCGCCAACAGCACGATCAAGCATTAACTGCCTTATACGAAAGCTTCAGCCTACGCCGCCAACATCAACTCTTGCCGATG ATCGCGAGTTCACTCGAAGCCTTGGCGCGGGTCGCCCAAGCTCAACACCATTGGTCGTGGGCGGTGCAATTGAGCAGTCG CGCTGCTAGTTTACGCTTGCAAAGTGGCGAGCCTATGCCAGCCACCGAGCAACGCATTCAACAACAGGTCTTGGATGAAG CCAAAAAATTGTTGGGCGAACCGCAATATCACCACGATTGGGAGCAAGGCCAACAGCTAGAATTGGATATGGTAACGTTA CGTCAACCGACCCCGCAAACGCCAACCCCGCTGTTGACCAAACGCGAACATGAATTATTGACCTTGATTGCCCAAGGCAA AAGCAATAGCGAAATTGCCCTAGAATTGGTGCTTAGCCCATTTACCGTGAACAATCATTTGCGGGCGATTTATCGTAAAT TGGGCGTTTCGACGCGGAGTGCAGCAGCCTACATTGCCCGCGAACGGGGCTTGCTCGAAAGCCTCGAACAGCGTGTTTAG
Upstream 100 bases:
>100_bases TTCATCCTTCATCCTTTCCCCGATCCGCTATGTTCTGCGGCAGGCTTGCACTATAATAGAGTTGTGAGGTGTGTTGTGCA TCACTGATAGGATTAAGCCG
Downstream 100 bases:
>100_bases GCCTGATCCGCAACTGGCTGTTCTCGGATTATAATAGGGCTTGAACCCGTTACGAGCCTATTGAGGATAGCAACGCAATG CGAGTATTACTTGTTGGAGC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 799; Mature: 798
Protein sequence:
>799_residues MGIPRHIPLPVTPLLGRIQEMAQLEQLLPDPTIRLVTLVGPGGAGKTRLALEAGRTVCEQFADGALFVSLAHVYDVDLVL PTLAQAFNLSRLGNQSLLASVGAWLADQELLLILDNLEQVIDVAALLVQLLALAPKLTLLVTSREVLNVQGEYRLPVPPL SLPPSSQPMAIEQLSEFSATRLFIERAKAARPHIPLNANDAQSIATICQRLDGLPLAIELVAAYTKVFTPQELLTRFSYS LDVPVGGARDLPNRQQTLRQCIDWSYQRLTPEEQTVFCYLSVLVSSWTMAAVEQICAGQANVVATVLALVNKSLVVEQTT HDGQTRFTMLHTIAEFAREQAVLREDFQTICQRHASYYLQMVAQAAPHLRDQQQALWLRQLDAEQGNIYAALQWTLDHAV VESIELFPSINLWITYRRRHGDVWWIGRMLEASSNIRSGARVETLSTAGWFILNQGLFAQAETIFEQALSLARDLQIPMS IGLALHGVGEIAYHRGDYAQAITLYEESVQIFEQLDDHNELAWSLDHLGRACIQQGQWKRAALLFARAHQLFARLGHLWG DAFALNHCGIVAAAQQDYDQAQHFIEASIAIAEQLHDPWHRAEGLHQLGLIALARQQHDQALTALYESFSLRRQHQLLPM IASSLEALARVAQAQHHWSWAVQLSSRAASLRLQSGEPMPATEQRIQQQVLDEAKKLLGEPQYHHDWEQGQQLELDMVTL RQPTPQTPTPLLTKREHELLTLIAQGKSNSEIALELVLSPFTVNNHLRAIYRKLGVSTRSAAAYIARERGLLESLEQRV
Sequences:
>Translated_799_residues MGIPRHIPLPVTPLLGRIQEMAQLEQLLPDPTIRLVTLVGPGGAGKTRLALEAGRTVCEQFADGALFVSLAHVYDVDLVL PTLAQAFNLSRLGNQSLLASVGAWLADQELLLILDNLEQVIDVAALLVQLLALAPKLTLLVTSREVLNVQGEYRLPVPPL SLPPSSQPMAIEQLSEFSATRLFIERAKAARPHIPLNANDAQSIATICQRLDGLPLAIELVAAYTKVFTPQELLTRFSYS LDVPVGGARDLPNRQQTLRQCIDWSYQRLTPEEQTVFCYLSVLVSSWTMAAVEQICAGQANVVATVLALVNKSLVVEQTT HDGQTRFTMLHTIAEFAREQAVLREDFQTICQRHASYYLQMVAQAAPHLRDQQQALWLRQLDAEQGNIYAALQWTLDHAV VESIELFPSINLWITYRRRHGDVWWIGRMLEASSNIRSGARVETLSTAGWFILNQGLFAQAETIFEQALSLARDLQIPMS IGLALHGVGEIAYHRGDYAQAITLYEESVQIFEQLDDHNELAWSLDHLGRACIQQGQWKRAALLFARAHQLFARLGHLWG DAFALNHCGIVAAAQQDYDQAQHFIEASIAIAEQLHDPWHRAEGLHQLGLIALARQQHDQALTALYESFSLRRQHQLLPM IASSLEALARVAQAQHHWSWAVQLSSRAASLRLQSGEPMPATEQRIQQQVLDEAKKLLGEPQYHHDWEQGQQLELDMVTL RQPTPQTPTPLLTKREHELLTLIAQGKSNSEIALELVLSPFTVNNHLRAIYRKLGVSTRSAAAYIARERGLLESLEQRV >Mature_798_residues GIPRHIPLPVTPLLGRIQEMAQLEQLLPDPTIRLVTLVGPGGAGKTRLALEAGRTVCEQFADGALFVSLAHVYDVDLVLP TLAQAFNLSRLGNQSLLASVGAWLADQELLLILDNLEQVIDVAALLVQLLALAPKLTLLVTSREVLNVQGEYRLPVPPLS LPPSSQPMAIEQLSEFSATRLFIERAKAARPHIPLNANDAQSIATICQRLDGLPLAIELVAAYTKVFTPQELLTRFSYSL DVPVGGARDLPNRQQTLRQCIDWSYQRLTPEEQTVFCYLSVLVSSWTMAAVEQICAGQANVVATVLALVNKSLVVEQTTH DGQTRFTMLHTIAEFAREQAVLREDFQTICQRHASYYLQMVAQAAPHLRDQQQALWLRQLDAEQGNIYAALQWTLDHAVV ESIELFPSINLWITYRRRHGDVWWIGRMLEASSNIRSGARVETLSTAGWFILNQGLFAQAETIFEQALSLARDLQIPMSI GLALHGVGEIAYHRGDYAQAITLYEESVQIFEQLDDHNELAWSLDHLGRACIQQGQWKRAALLFARAHQLFARLGHLWGD AFALNHCGIVAAAQQDYDQAQHFIEASIAIAEQLHDPWHRAEGLHQLGLIALARQQHDQALTALYESFSLRRQHQLLPMI ASSLEALARVAQAQHHWSWAVQLSSRAASLRLQSGEPMPATEQRIQQQVLDEAKKLLGEPQYHHDWEQGQQLELDMVTLR QPTPQTPTPLLTKREHELLTLIAQGKSNSEIALELVLSPFTVNNHLRAIYRKLGVSTRSAAAYIARERGLLESLEQRV
Specific function: Positively Regulates The Transcription Of The Maltose Regulon Whose Gene Products Are Responsible For Uptake And Catabolism Of Malto-Oligosaccharides. Binds And Recognizes A DNA Motif (Called The Malt Box): 5'-Gga[Tg]Ga-3'. [C]
COG id: COG3903
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000767 - InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 89305; Mature: 89174
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS50293 TPR_REGION ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIPRHIPLPVTPLLGRIQEMAQLEQLLPDPTIRLVTLVGPGGAGKTRLALEAGRTVCEQ CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH FADGALFVSLAHVYDVDLVLPTLAQAFNLSRLGNQSLLASVGAWLADQELLLILDNLEQV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH IDVAALLVQLLALAPKLTLLVTSREVLNVQGEYRLPVPPLSLPPSSQPMAIEQLSEFSAT HHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHH RLFIERAKAARPHIPLNANDAQSIATICQRLDGLPLAIELVAAYTKVFTPQELLTRFSYS HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCE LDVPVGGARDLPNRQQTLRQCIDWSYQRLTPEEQTVFCYLSVLVSSWTMAAVEQICAGQA ECCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH NVVATVLALVNKSLVVEQTTHDGQTRFTMLHTIAEFAREQAVLREDFQTICQRHASYYLQ HHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVAQAAPHLRDQQQALWLRQLDAEQGNIYAALQWTLDHAVVESIELFPSINLWITYRRRH HHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEEEEEECC GDVWWIGRMLEASSNIRSGARVETLSTAGWFILNQGLFAQAETIFEQALSLARDLQIPMS CCEEEHHHHHHHCCCCCCCCCEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHH IGLALHGVGEIAYHRGDYAQAITLYEESVQIFEQLDDHNELAWSLDHLGRACIQQGQWKR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHH AALLFARAHQLFARLGHLWGDAFALNHCGIVAAAQQDYDQAQHFIEASIAIAEQLHDPWH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHH RAEGLHQLGLIALARQQHDQALTALYESFSLRRQHQLLPMIASSLEALARVAQAQHHWSW HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVQLSSRAASLRLQSGEPMPATEQRIQQQVLDEAKKLLGEPQYHHDWEQGQQLELDMVTL EEEEHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEEEEEEEEE RQPTPQTPTPLLTKREHELLTLIAQGKSNSEIALELVLSPFTVNNHLRAIYRKLGVSTRS CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHH AAAYIARERGLLESLEQRV HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GIPRHIPLPVTPLLGRIQEMAQLEQLLPDPTIRLVTLVGPGGAGKTRLALEAGRTVCEQ CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH FADGALFVSLAHVYDVDLVLPTLAQAFNLSRLGNQSLLASVGAWLADQELLLILDNLEQV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH IDVAALLVQLLALAPKLTLLVTSREVLNVQGEYRLPVPPLSLPPSSQPMAIEQLSEFSAT HHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHH RLFIERAKAARPHIPLNANDAQSIATICQRLDGLPLAIELVAAYTKVFTPQELLTRFSYS HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCE LDVPVGGARDLPNRQQTLRQCIDWSYQRLTPEEQTVFCYLSVLVSSWTMAAVEQICAGQA ECCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH NVVATVLALVNKSLVVEQTTHDGQTRFTMLHTIAEFAREQAVLREDFQTICQRHASYYLQ HHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVAQAAPHLRDQQQALWLRQLDAEQGNIYAALQWTLDHAVVESIELFPSINLWITYRRRH HHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEEEEEECC GDVWWIGRMLEASSNIRSGARVETLSTAGWFILNQGLFAQAETIFEQALSLARDLQIPMS CCEEEHHHHHHHCCCCCCCCCEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHH IGLALHGVGEIAYHRGDYAQAITLYEESVQIFEQLDDHNELAWSLDHLGRACIQQGQWKR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHH AALLFARAHQLFARLGHLWGDAFALNHCGIVAAAQQDYDQAQHFIEASIAIAEQLHDPWH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHH RAEGLHQLGLIALARQQHDQALTALYESFSLRRQHQLLPMIASSLEALARVAQAQHHWSW HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVQLSSRAASLRLQSGEPMPATEQRIQQQVLDEAKKLLGEPQYHHDWEQGQQLELDMVTL EEEEHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEEEEEEEEE RQPTPQTPTPLLTKREHELLTLIAQGKSNSEIALELVLSPFTVNNHLRAIYRKLGVSTRS CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHH AAAYIARERGLLESLEQRV HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]