| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897431
Identifier: 159897431
GI number: 159897431
Start: 1034196
End: 1035068
Strand: Reverse
Name: 159897431
Synonym: Haur_0902
Alternate gene names: NA
Gene position: 1035068-1034196 (Counterclockwise)
Preceding gene: 159897432
Following gene: 159897426
Centisome position: 16.31
GC content: 39.86
Gene sequence:
>873_bases ATGACCGAGCAAGCACCCCAACTTAATGCCAATGATGCTTTTATCGAGGCGGCTGAGCGAATTCGGATTTTGCATAAACG CGATTTAGAAGATGCCATTCGTGATCGCAAACGGCCTAAATTAAGCGCTTCGCCATTCTCTCAACAAGCGATTTGGCTAG AGTTTCCGACCTATAAGCGTTTGTTGGAGAAACGCGCCAAAATTACTGTACCTGAGGTGATTGTGCGTGGTGTGGCAACC TTGTTGGAATGTAATATTAGCGAACGTAATATTTTGCTAAGTGCAGCGGGCTACAAACCTGATCCAGAGATTCTTAGCGG AGCTGCTTTAGAACAGCATCTCGAACGCTACCGTAGCATCGTACATAATCTCACTATTCCAGGCTTTATTCTGAATCATG TATGGGATATTTTGGAAGTCAATTCGCTGATGAATCGTTTATTTGAACACTATATGAGTGGGTTCGCCAGCATTCCTGTG GATGATCGCAATATTCTCAATTTAATGTTTGATCCACGTTACGGATTCAAACGTTTATTCAGTGTCGATATTATTCAGTG GGAATTAATGGCTCGTAGTTATATTTATAATTTTCGCCAAGCAACCAAAGGTTTTGAACTTGAAACATGGTATCGTGCAA AAATCAACTATTTAAGCCAATTTGCTGATTTCAATCTGATCTGGAAGCAAGTTGAGGCTAATTTATACAAAGAGTATGAT ACTTCGTTAACCTATTTTACTAGTCAATTTTTTGGCTTTCGCTCAATTTATATCACTGAATCAGAAAAATTCCCCTATCC ACGAATTAATGCCTACATCAGCGAAGATTTAACTGCATCGATAGCACTTTTGGCAACGCCAAATCAAGCTTAA
Upstream 100 bases:
>100_bases CAACAACATCCAAATAGCGTAGATTTGCTATAATAGCAGCGTTATTTTTAGGCTGCTACCGCATGAATCTAAGGGTAAGC GTCCTTGAAAAAGGAAAACT
Downstream 100 bases:
>100_bases TCAAAACGCCAGCACTATCAGCACCAATAGTGCTGGCAGCAGATTTAGCAACCCAAGGCATCAGCCAAGGCGGCCAAACT TGGCACAACCAAATCGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTEQAPQLNANDAFIEAAERIRILHKRDLEDAIRDRKRPKLSASPFSQQAIWLEFPTYKRLLEKRAKITVPEVIVRGVAT LLECNISERNILLSAAGYKPDPEILSGAALEQHLERYRSIVHNLTIPGFILNHVWDILEVNSLMNRLFEHYMSGFASIPV DDRNILNLMFDPRYGFKRLFSVDIIQWELMARSYIYNFRQATKGFELETWYRAKINYLSQFADFNLIWKQVEANLYKEYD TSLTYFTSQFFGFRSIYITESEKFPYPRINAYISEDLTASIALLATPNQA
Sequences:
>Translated_290_residues MTEQAPQLNANDAFIEAAERIRILHKRDLEDAIRDRKRPKLSASPFSQQAIWLEFPTYKRLLEKRAKITVPEVIVRGVAT LLECNISERNILLSAAGYKPDPEILSGAALEQHLERYRSIVHNLTIPGFILNHVWDILEVNSLMNRLFEHYMSGFASIPV DDRNILNLMFDPRYGFKRLFSVDIIQWELMARSYIYNFRQATKGFELETWYRAKINYLSQFADFNLIWKQVEANLYKEYD TSLTYFTSQFFGFRSIYITESEKFPYPRINAYISEDLTASIALLATPNQA >Mature_289_residues TEQAPQLNANDAFIEAAERIRILHKRDLEDAIRDRKRPKLSASPFSQQAIWLEFPTYKRLLEKRAKITVPEVIVRGVATL LECNISERNILLSAAGYKPDPEILSGAALEQHLERYRSIVHNLTIPGFILNHVWDILEVNSLMNRLFEHYMSGFASIPVD DRNILNLMFDPRYGFKRLFSVDIIQWELMARSYIYNFRQATKGFELETWYRAKINYLSQFADFNLIWKQVEANLYKEYDT SLTYFTSQFFGFRSIYITESEKFPYPRINAYISEDLTASIALLATPNQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33915; Mature: 33784
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQAPQLNANDAFIEAAERIRILHKRDLEDAIRDRKRPKLSASPFSQQAIWLEFPTYKR CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHH LLEKRAKITVPEVIVRGVATLLECNISERNILLSAAGYKPDPEILSGAALEQHLERYRSI HHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH VHNLTIPGFILNHVWDILEVNSLMNRLFEHYMSGFASIPVDDRNILNLMFDPRYGFKRLF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECCCHHHHHHH SVDIIQWELMARSYIYNFRQATKGFELETWYRAKINYLSQFADFNLIWKQVEANLYKEYD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TSLTYFTSQFFGFRSIYITESEKFPYPRINAYISEDLTASIALLATPNQA CHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEECCCCC >Mature Secondary Structure TEQAPQLNANDAFIEAAERIRILHKRDLEDAIRDRKRPKLSASPFSQQAIWLEFPTYKR CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHH LLEKRAKITVPEVIVRGVATLLECNISERNILLSAAGYKPDPEILSGAALEQHLERYRSI HHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH VHNLTIPGFILNHVWDILEVNSLMNRLFEHYMSGFASIPVDDRNILNLMFDPRYGFKRLF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECCCHHHHHHH SVDIIQWELMARSYIYNFRQATKGFELETWYRAKINYLSQFADFNLIWKQVEANLYKEYD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TSLTYFTSQFFGFRSIYITESEKFPYPRINAYISEDLTASIALLATPNQA CHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA